RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 SCAPERQ9BY12 1400 aa33.95■■■■□ 3.02
UBE2D3-229ENST00000510129 PREX2Q70Z35 1606 aa33.94■■■■□ 3.02
UBE2D3-229ENST00000510129 ZMYM4Q5VZL5 1548 aa33.94■■■■□ 3.02
UBE2D3-229ENST00000510129 POGZQ7Z3K3 1410 aa33.92■■■■□ 3.02
UBE2D3-229ENST00000510129 VPS8Q8N3P4 1428 aa33.92■■■■□ 3.02
UBE2D3-229ENST00000510129 MAGI2Q86UL8 1455 aa33.92■■■■□ 3.02
UBE2D3-229ENST00000510129 CDC42BPBQ9Y5S2 1711 aa33.9■■■■□ 3.02
UBE2D3-229ENST00000510129 EHBP1L1Q8N3D4 1523 aa33.88■■■■□ 3.01
UBE2D3-229ENST00000510129 ARHGEF40Q8TER5 1519 aa33.87■■■■□ 3.01
UBE2D3-229ENST00000510129 CDC42BPAQ5VT25 1732 aa33.85■■■■□ 3.01
UBE2D3-229ENST00000510129 ZNF518AQ6AHZ1 1483 aa33.85■■■■□ 3.01
UBE2D3-229ENST00000510129 ZFYVE16Q7Z3T8 1539 aa33.82■■■■□ 3
UBE2D3-229ENST00000510129 CCNB3Q8WWL7 1395 aa33.8■■■■□ 3
UBE2D3-229ENST00000510129 GPATCH8Q9UKJ3 1502 aaKnown RBP33.79■■■■□ 3
UBE2D3-229ENST00000510129 ABCC1P33527 1531 aa33.77■■■■□ 3
UBE2D3-229ENST00000510129 TIAM1Q13009 1591 aa33.77■■■■□ 3
UBE2D3-229ENST00000510129 KDM5CP41229 1560 aa33.75■■■□□ 2.99
UBE2D3-229ENST00000510129 MAP3K1Q13233 1512 aa33.74■■■□□ 2.99
UBE2D3-229ENST00000510129 PLEKHH2Q8IVE3 1493 aa33.72■■■□□ 2.99
UBE2D3-229ENST00000510129 CFDP1Q9UEE9 299 aaPredicted RBP33.72■■■□□ 2.99
UBE2D3-229ENST00000510129 ARID4BQ4LE39 1312 aaPredicted RBP33.71■■■□□ 2.99
UBE2D3-229ENST00000510129 ITSN2Q9NZM3 1697 aa33.71■■■□□ 2.99
UBE2D3-229ENST00000510129 SUPT6HQ7KZ85 1726 aaKnown RBP33.69■■■□□ 2.98
UBE2D3-229ENST00000510129 YEATS2Q9ULM3 1422 aa33.69■■■□□ 2.98
UBE2D3-229ENST00000510129 AFAP1Q8N556 730 aa33.68■■■□□ 2.98
UBE2D3-229ENST00000510129 HECW2Q9P2P5 1572 aa33.67■■■□□ 2.98
UBE2D3-229ENST00000510129 ATP10AO60312 1499 aa33.66■■■□□ 2.98
UBE2D3-229ENST00000510129 ZNF777Q9ULD5 760 aaPredicted RBP33.66■■■□□ 2.98
UBE2D3-229ENST00000510129 KIAA1107Q9UPP5 1409 aa33.66■■■□□ 2.98
UBE2D3-229ENST00000510129 SAMD9LQ8IVG5 1584 aa33.65■■■□□ 2.98
UBE2D3-229ENST00000510129 MLH3Q9UHC1 1453 aa33.65■■■□□ 2.98
UBE2D3-229ENST00000510129 BCORL1Q5H9F3 1711 aa33.65■■■□□ 2.98
UBE2D3-229ENST00000510129 ARHGEF12Q9NZN5 1544 aa33.63■■■□□ 2.97
UBE2D3-229ENST00000510129 C9orf84Q5VXU9 1444 aa33.63■■■□□ 2.97
UBE2D3-229ENST00000510129 MYT1LQ9UL68 1186 aa33.63■■■□□ 2.97
UBE2D3-229ENST00000510129 ADAMTSL3P82987 1691 aa33.63■■■□□ 2.97
UBE2D3-229ENST00000510129 LRRC9Q6ZRR7 1453 aa33.63■■■□□ 2.97
UBE2D3-229ENST00000510129 TRAPPC8Q9Y2L5 1435 aa33.62■■■□□ 2.97
UBE2D3-229ENST00000510129 NCOA2Q15596 1464 aa33.61■■■□□ 2.97
UBE2D3-229ENST00000510129 APLP2Q06481 763 aa33.6■■■□□ 2.97
UBE2D3-229ENST00000510129 SYCP2Q9BX26 1530 aa33.58■■■□□ 2.97
UBE2D3-229ENST00000510129 REREQ9P2R6 1566 aa33.55■■■□□ 2.96
UBE2D3-229ENST00000510129 DIP2CQ9Y2E4 1556 aa33.52■■■□□ 2.96
UBE2D3-229ENST00000510129 HNRNPMP52272 730 aaKnown RBP eCLIP33.5■■■□□ 2.954e-13■■■■■ 32.7
UBE2D3-229ENST00000510129 MADDQ8WXG6 1647 aa33.49■■■□□ 2.95
UBE2D3-229ENST00000510129 PTPRMP28827 1452 aa33.49■■■□□ 2.95
UBE2D3-229ENST00000510129 SPAG9O60271 1321 aaKnown RBP33.49■■■□□ 2.95
UBE2D3-229ENST00000510129 ABCA6Q8N139 1617 aa33.48■■■□□ 2.95
UBE2D3-229ENST00000510129 SIGLEC1Q9BZZ2 1709 aa33.47■■■□□ 2.95
UBE2D3-229ENST00000510129 KIDINS220Q9ULH0 1771 aa33.47■■■□□ 2.95
UBE2D3-229ENST00000510129 RSPH4AQ5TD94 716 aa33.45■■■□□ 2.95
UBE2D3-229ENST00000510129 KANK4Q5T7N3 995 aaPredicted RBP33.43■■■□□ 2.94
UBE2D3-229ENST00000510129 AGLP35573 1532 aa33.43■■■□□ 2.94
UBE2D3-229ENST00000510129 ATP7AQ04656 1500 aa33.42■■■□□ 2.94
UBE2D3-229ENST00000510129 MBD5Q9P267 1494 aa33.41■■■□□ 2.94
UBE2D3-229ENST00000510129 INO80Q9ULG1 1556 aaPredicted RBP33.4■■■□□ 2.94
UBE2D3-229ENST00000510129 ZNF644Q9H582 1327 aaPredicted RBP33.4■■■□□ 2.94
UBE2D3-229ENST00000510129 CAMSAP2Q08AD1 1489 aa33.39■■■□□ 2.94
UBE2D3-229ENST00000510129 MLECQ14165 292 aa33.38■■■□□ 2.93
UBE2D3-229ENST00000510129 RIMS1Q86UR5 1692 aaKnown RBP33.38■■■□□ 2.93
UBE2D3-229ENST00000510129 FER1L4A9Z1Z3 1794 aa33.37■■■□□ 2.93
UBE2D3-229ENST00000510129 MIA2Q96PC5 1412 aa33.36■■■□□ 2.93
UBE2D3-229ENST00000510129 RTEL1-TNFRSF6BF6WH68 1400 aa33.36■■■□□ 2.93
UBE2D3-229ENST00000510129 MYOM3Q5VTT5 1437 aa33.36■■■□□ 2.93
UBE2D3-229ENST00000510129 CCDC141Q6ZP82 1450 aa33.34■■■□□ 2.93
UBE2D3-229ENST00000510129 ARHGEF5Q12774 1597 aa33.31■■■□□ 2.92
UBE2D3-229ENST00000510129 ADGBQ8N7X0 1667 aa33.29■■■□□ 2.92
UBE2D3-229ENST00000510129 A2MP01023 1474 aa33.27■■■□□ 2.92
UBE2D3-229ENST00000510129 TSPY4P0CV99 314 aa33.25■■■□□ 2.91
UBE2D3-229ENST00000510129 TSPY10P0CW01 314 aa33.25■■■□□ 2.91
UBE2D3-229ENST00000510129 ESF1Q9H501 851 aaKnown RBP33.25■■■□□ 2.91
UBE2D3-229ENST00000510129 PLXNC1O60486 1568 aa33.24■■■□□ 2.91
UBE2D3-229ENST00000510129 CNTLNQ9NXG0 1405 aa33.19■■■□□ 2.9
UBE2D3-229ENST00000510129 DHX29Q7Z478 1369 aaKnown RBP33.14■■■□□ 2.9
UBE2D3-229ENST00000510129 MAST1Q9Y2H9 1570 aa33.13■■■□□ 2.89
UBE2D3-229ENST00000510129 PPP6R1Q9UPN7 881 aa33.13■■■□□ 2.89
UBE2D3-229ENST00000510129 PTPN23Q9H3S7 1636 aa33.12■■■□□ 2.89
UBE2D3-229ENST00000510129 FGD6Q6ZV73 1430 aa33.11■■■□□ 2.89
UBE2D3-229ENST00000510129 PLPPR3Q6T4P5 718 aa33.09■■■□□ 2.89
UBE2D3-229ENST00000510129 MROH2AA6NES4 1674 aa33.07■■■□□ 2.88
UBE2D3-229ENST00000510129 TCOF1Q13428 1488 aaKnown RBP33.06■■■□□ 2.88
UBE2D3-229ENST00000510129 LMTK3Q96Q04 1460 aa33.05■■■□□ 2.88
UBE2D3-229ENST00000510129 SHANK2Q9UPX8 1470 aa33.04■■■□□ 2.88
UBE2D3-229ENST00000510129 C3P01024 1663 aa33.02■■■□□ 2.88
UBE2D3-229ENST00000510129 GGT6Q6P531 493 aa33.02■■■□□ 2.88
UBE2D3-229ENST00000510129 FAM135AQ9P2D6 1515 aa33.01■■■□□ 2.87
UBE2D3-229ENST00000510129 PREX1Q8TCU6 1659 aa33.01■■■□□ 2.87
UBE2D3-229ENST00000510129 CEBPAP49715 358 aaPredicted RBP33■■■□□ 2.87
UBE2D3-229ENST00000510129 CROCC2H7BZ55 1655 aa32.98■■■□□ 2.87
UBE2D3-229ENST00000510129 SETD1BQ9UPS6 1966 aaKnown RBP32.98■■■□□ 2.87
UBE2D3-229ENST00000510129 DNMT1P26358 1616 aaKnown RBP32.98■■■□□ 2.87
UBE2D3-229ENST00000510129 KIF3BO15066 747 aa32.97■■■□□ 2.87
UBE2D3-229ENST00000510129 ZMYM3Q14202 1370 aa32.96■■■□□ 2.87
UBE2D3-229ENST00000510129 ABCC5O15440 1437 aa32.95■■■□□ 2.87
UBE2D3-229ENST00000510129 DAPK1P53355 1430 aa32.95■■■□□ 2.87
UBE2D3-229ENST00000510129 CLTCQ00610 1675 aaKnown RBP32.94■■■□□ 2.86
UBE2D3-229ENST00000510129 NPATQ14207 1427 aa32.94■■■□□ 2.86
UBE2D3-229ENST00000510129 EIF2AK4Q9P2K8 1649 aaKnown RBP32.93■■■□□ 2.86
UBE2D3-229ENST00000510129 UHRF1BP1Q6BDS2 1440 aa32.93■■■□□ 2.86
UBE2D3-229ENST00000510129 DUOX2Q9NRD8 1548 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms