RNA–Protein interactions for RNA: ENST00000510060.5

SSBP2-214, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 1,042 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-214ENST00000510060 CFAP44Q96MT7 982 aa13.86□□□□□ -0.19
SSBP2-214ENST00000510060 C2orf72A6NCS6 295 aa13.85□□□□□ -0.19
SSBP2-214ENST00000510060 KIF3CO14782 793 aa13.85□□□□□ -0.19
SSBP2-214ENST00000510060 DOK7Q18PE1 504 aa13.84□□□□□ -0.19
SSBP2-214ENST00000510060 FAM163AQ96GL9 167 aaPredicted RBP13.82□□□□□ -0.2
SSBP2-214ENST00000510060 RIMBP2O15034 1052 aa13.81□□□□□ -0.2
SSBP2-214ENST00000510060 GPHNQ9NQX3 736 aaPredicted RBP13.81□□□□□ -0.2
SSBP2-214ENST00000510060 PDE4AP27815 886 aa13.78□□□□□ -0.2
SSBP2-214ENST00000510060 ZNF710Q8N1W2 664 aa13.77□□□□□ -0.21
SSBP2-214ENST00000510060 CRISPLD2Q9H0B8 497 aa13.77□□□□□ -0.21
SSBP2-214ENST00000510060 HOXB3P14651 431 aaPredicted RBP13.75□□□□□ -0.21
SSBP2-214ENST00000510060 FOXK1P85037 733 aa13.75□□□□□ -0.21
SSBP2-214ENST00000510060 ST18O60284 1047 aa13.74□□□□□ -0.21
SSBP2-214ENST00000510060 ZSWIM6Q9HCJ5 1215 aa13.74□□□□□ -0.21
SSBP2-214ENST00000510060 NCKAP5LQ9HCH0 1330 aa13.7□□□□□ -0.22
SSBP2-214ENST00000510060 DSG2Q14126 1118 aa13.69□□□□□ -0.22
SSBP2-214ENST00000510060 PLPP6Q8IY26 295 aa13.69□□□□□ -0.22
SSBP2-214ENST00000510060 SLC34A2O95436 690 aa13.68□□□□□ -0.22
SSBP2-214ENST00000510060 LCE2DQ5TA82 110 aaPredicted RBP13.68□□□□□ -0.22
SSBP2-214ENST00000510060 LARP6Q9BRS8 491 aaKnown RBP13.68□□□□□ -0.22
SSBP2-214ENST00000510060 PPP1R15BQ5SWA1 713 aa13.67□□□□□ -0.22
SSBP2-214ENST00000510060 CADPS2Q86UW7 1296 aa13.67□□□□□ -0.22
SSBP2-214ENST00000510060 DDX27Q96GQ7 796 aaKnown RBP13.67□□□□□ -0.22
SSBP2-214ENST00000510060 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
SSBP2-214ENST00000510060 HOXB1P14653 301 aaPredicted RBP13.65□□□□□ -0.22
SSBP2-214ENST00000510060 MFSD10Q14728 455 aa13.65□□□□□ -0.22
SSBP2-214ENST00000510060 POTEMA6NI47 508 aa13.62□□□□□ -0.23
SSBP2-214ENST00000510060 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
SSBP2-214ENST00000510060 EMP3P54852 163 aa13.6□□□□□ -0.23
SSBP2-214ENST00000510060 GPR153Q6NV75 609 aa13.59□□□□□ -0.23
SSBP2-214ENST00000510060 TBC1D12O60347 775 aa13.58□□□□□ -0.24
SSBP2-214ENST00000510060 PTCD2Q8WV60 388 aaKnown RBP13.58□□□□□ -0.24
SSBP2-214ENST00000510060 PCDHGA4Q9Y5G9 962 aa13.57□□□□□ -0.24
SSBP2-214ENST00000510060 MARVELD3Q96A59 401 aa13.56□□□□□ -0.24
SSBP2-214ENST00000510060 ARSIQ5FYB1 569 aa13.55□□□□□ -0.24
SSBP2-214ENST00000510060 WDR70Q9NW82 654 aa13.55□□□□□ -0.24
SSBP2-214ENST00000510060 TSHZ2Q9NRE2 1034 aa13.54□□□□□ -0.24
SSBP2-214ENST00000510060 OXER1Q8TDS5 423 aa13.52□□□□□ -0.25
SSBP2-214ENST00000510060 ERBB3P21860 1342 aa13.49□□□□□ -0.25
SSBP2-214ENST00000510060 PCDH10Q9P2E7 1040 aa13.49□□□□□ -0.25
SSBP2-214ENST00000510060 ZNF316A6NFI3 1004 aaPredicted RBP13.48□□□□□ -0.25
SSBP2-214ENST00000510060 CAMK2BQ13554 666 aa13.48□□□□□ -0.25
SSBP2-214ENST00000510060 UPF1Q92900 1129 aaKnown RBP eCLIP13.48□□□□□ -0.25
SSBP2-214ENST00000510060 FAM205CA6NFA0 338 aa13.47□□□□□ -0.25
SSBP2-214ENST00000510060 NUDT7P0C024 238 aa13.47□□□□□ -0.25
SSBP2-214ENST00000510060 KHSRPQ92945 711 aaKnown RBP eCLIP13.45□□□□□ -0.26
SSBP2-214ENST00000510060 HAP1P54257 671 aaPredicted RBP13.44□□□□□ -0.26
SSBP2-214ENST00000510060 HS3ST6Q96QI5 342 aa13.44□□□□□ -0.26
SSBP2-214ENST00000510060 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
SSBP2-214ENST00000510060 MAP3K9P80192 1104 aa13.43□□□□□ -0.26
SSBP2-214ENST00000510060 E2F4Q16254 413 aa13.43□□□□□ -0.26
SSBP2-214ENST00000510060 EMILIN3Q9NT22 766 aa13.42□□□□□ -0.26
SSBP2-214ENST00000510060 VARS2Q5ST30 1063 aaKnown RBP13.4□□□□□ -0.26
SSBP2-214ENST00000510060 KDM4FA0A1W2PPD8 638 aa13.39□□□□□ -0.27
SSBP2-214ENST00000510060 CDAN1Q8IWY9 1227 aa13.38□□□□□ -0.27
SSBP2-214ENST00000510060 LHX6Q9UPM6 363 aa13.38□□□□□ -0.27
SSBP2-214ENST00000510060 EVI5O60447 810 aa13.36□□□□□ -0.27
SSBP2-214ENST00000510060 DPYSL4O14531 572 aa13.33□□□□□ -0.28
SSBP2-214ENST00000510060 ZNF687Q8N1G0 1237 aa13.33□□□□□ -0.28
SSBP2-214ENST00000510060 ANO8Q9HCE9 1232 aaPredicted RBP13.33□□□□□ -0.28
SSBP2-214ENST00000510060 ARIH1Q9Y4X5 557 aaPredicted RBP13.33□□□□□ -0.28
SSBP2-214ENST00000510060 POTEB3A0JP26 581 aa13.32□□□□□ -0.28
SSBP2-214ENST00000510060 POTEBQ6S5H4 581 aa13.32□□□□□ -0.28
SSBP2-214ENST00000510060 PPP4R3BQ5MIZ7 849 aa13.31□□□□□ -0.28
SSBP2-214ENST00000510060 P3H3Q8IVL6 736 aa13.31□□□□□ -0.28
SSBP2-214ENST00000510060 SPDYE16A6NNV3 312 aaPredicted RBP13.3□□□□□ -0.28
SSBP2-214ENST00000510060 PBX2P40425 430 aa13.27□□□□□ -0.29
SSBP2-214ENST00000510060 PDIA6Q15084 440 aa13.27□□□□□ -0.29
SSBP2-214ENST00000510060 VSIG10Q8N0Z9 540 aa13.26□□□□□ -0.29
SSBP2-214ENST00000510060 JPH4Q96JJ6 628 aa13.26□□□□□ -0.29
SSBP2-214ENST00000510060 ZNF454Q8N9F8 522 aa13.25□□□□□ -0.29
SSBP2-214ENST00000510060 ARHGEF1Q92888 912 aaKnown RBP13.25□□□□□ -0.29
SSBP2-214ENST00000510060 FOSBP53539 338 aa13.23□□□□□ -0.29
SSBP2-214ENST00000510060 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
SSBP2-214ENST00000510060 PTGER2P43116 358 aa13.21□□□□□ -0.29
SSBP2-214ENST00000510060 KCNV2Q8TDN2 545 aa13.21□□□□□ -0.29
SSBP2-214ENST00000510060 PHF14O94880 888 aa13.2□□□□□ -0.3
SSBP2-214ENST00000510060 KRTAP3-3Q9BYR6 98 aa13.19□□□□□ -0.3
SSBP2-214ENST00000510060 KRTAP3-2Q9BYR7 98 aa13.19□□□□□ -0.3
SSBP2-214ENST00000510060 FBXW7Q969H0 707 aa13.18□□□□□ -0.3
SSBP2-214ENST00000510060 ZDHHC16Q969W1 377 aa13.18□□□□□ -0.3
SSBP2-214ENST00000510060 EPAS1Q99814 870 aa13.18□□□□□ -0.3
SSBP2-214ENST00000510060 ARHGAP33O14559 1287 aa13.17□□□□□ -0.3
SSBP2-214ENST00000510060 TYW1BQ6NUM6 668 aa13.16□□□□□ -0.3
SSBP2-214ENST00000510060 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
SSBP2-214ENST00000510060 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
SSBP2-214ENST00000510060 PCDHGA10Q9Y5H3 936 aa13.14□□□□□ -0.31
SSBP2-214ENST00000510060 PTPREP23469 700 aa13.12□□□□□ -0.31
SSBP2-214ENST00000510060 LSM11P83369 360 aaKnown RBP eCLIP13.12□□□□□ -0.31
SSBP2-214ENST00000510060 DDX12PQ92771 950 aa13.12□□□□□ -0.31
SSBP2-214ENST00000510060 KCNK17Q96T54 332 aa13.1□□□□□ -0.31
SSBP2-214ENST00000510060 AXIN2Q9Y2T1 843 aa13.1□□□□□ -0.31
SSBP2-214ENST00000510060 POTEEQ6S8J3 1075 aa13.09□□□□□ -0.31
SSBP2-214ENST00000510060 ADAM33Q9BZ11 813 aa13.09□□□□□ -0.31
SSBP2-214ENST00000510060 NBR1Q14596 966 aa13.08□□□□□ -0.32
SSBP2-214ENST00000510060 GRXCR2A6NFK2 248 aa13.06□□□□□ -0.32
SSBP2-214ENST00000510060 ANKRD13DQ6ZTN6 518 aa13.06□□□□□ -0.32
SSBP2-214ENST00000510060 TK2O00142 265 aa13.05□□□□□ -0.32
SSBP2-214ENST00000510060 PSEN2P49810 448 aa13.05□□□□□ -0.32
SSBP2-214ENST00000510060 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms