RNA–Protein interactions for RNA: ENST00000510056.5

MATR3-215, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-215ENST00000510056 MKRN4PQ13434 485 aaPredicted RBP10.35□□□□□ -0.75
MATR3-215ENST00000510056 PTPRGP23470 1445 aa10.34□□□□□ -0.75
MATR3-215ENST00000510056 ZMYND15Q9H091 742 aa10.33□□□□□ -0.75
MATR3-215ENST00000510056 PROM2Q8N271 834 aa10.33□□□□□ -0.76
MATR3-215ENST00000510056 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.33□□□□□ -0.76
MATR3-215ENST00000510056 ASXL2Q76L83 1435 aa10.33□□□□□ -0.76
MATR3-215ENST00000510056 COL17A1Q9UMD9 1497 aaPredicted RBP10.33□□□□□ -0.76
MATR3-215ENST00000510056 PPRC1Q5VV67 1664 aaKnown RBP10.32□□□□□ -0.76
MATR3-215ENST00000510056 CHMP4AQ9BY43 222 aa10.32□□□□□ -0.76
MATR3-215ENST00000510056 KIAA0586Q9BVV6 1533 aa10.31□□□□□ -0.76
MATR3-215ENST00000510056 APBB1O00213 710 aa10.31□□□□□ -0.76
MATR3-215ENST00000510056 GPBP1L1Q9HC44 474 aaPredicted RBP10.3□□□□□ -0.76
MATR3-215ENST00000510056 ABCC2Q92887 1545 aa10.29□□□□□ -0.76
MATR3-215ENST00000510056 CUL7Q14999 1698 aa10.29□□□□□ -0.76
MATR3-215ENST00000510056 FOXD4L5Q5VV16 416 aaPredicted RBP10.28□□□□□ -0.76
MATR3-215ENST00000510056 FOXD4L4Q8WXT5 416 aaPredicted RBP10.28□□□□□ -0.76
MATR3-215ENST00000510056 RSPH6AQ9H0K4 717 aa10.28□□□□□ -0.76
MATR3-215ENST00000510056 ZBTB7CA1YPR0 619 aa10.28□□□□□ -0.76
MATR3-215ENST00000510056 PLB1Q6P1J6 1458 aa10.27□□□□□ -0.76
MATR3-215ENST00000510056 FBXO41Q8TF61 875 aa10.27□□□□□ -0.77
MATR3-215ENST00000510056 IGF1RP08069 1367 aa10.26□□□□□ -0.77
MATR3-215ENST00000510056 TNIKQ9UKE5 1360 aa10.26□□□□□ -0.77
MATR3-215ENST00000510056 SPOCK2Q92563 424 aa10.26□□□□□ -0.77
MATR3-215ENST00000510056 GLI2P10070 1586 aa10.26□□□□□ -0.77
MATR3-215ENST00000510056 PDIA4P13667 645 aaKnown RBP10.25□□□□□ -0.77
MATR3-215ENST00000510056 CARMIL2Q6F5E8 1435 aa10.24□□□□□ -0.77
MATR3-215ENST00000510056 KCTD17Q8N5Z5 321 aa10.24□□□□□ -0.77
MATR3-215ENST00000510056 KCNV2Q8TDN2 545 aa10.24□□□□□ -0.77
MATR3-215ENST00000510056 EPRSP07814 1512 aaKnown RBP10.24□□□□□ -0.77
MATR3-215ENST00000510056 RNF25Q96BH1 459 aaPredicted RBP10.23□□□□□ -0.77
MATR3-215ENST00000510056 IL27Q8NEV9 243 aa10.23□□□□□ -0.77
MATR3-215ENST00000510056 DHX37Q8IY37 1157 aaKnown RBP10.23□□□□□ -0.77
MATR3-215ENST00000510056 RAD21O60216 631 aa10.22□□□□□ -0.77
MATR3-215ENST00000510056 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
MATR3-215ENST00000510056 UACAQ9BZF9 1416 aa10.22□□□□□ -0.77
MATR3-215ENST00000510056 MAP3K4Q9Y6R4 1608 aa10.22□□□□□ -0.77
MATR3-215ENST00000510056 MTMR7Q9Y216 660 aa10.22□□□□□ -0.77
MATR3-215ENST00000510056 TEX14Q8IWB6 1497 aa10.21□□□□□ -0.77
MATR3-215ENST00000510056 KIF27Q86VH2 1401 aa10.21□□□□□ -0.78
MATR3-215ENST00000510056 GTPBP6O43824 516 aaPredicted RBP10.2□□□□□ -0.78
MATR3-215ENST00000510056 ZC3H15Q8WU90 426 aaKnown RBP10.2□□□□□ -0.78
MATR3-215ENST00000510056 KCNH8Q96L42 1107 aa10.2□□□□□ -0.78
MATR3-215ENST00000510056 CIZ1Q9ULV3 898 aaPredicted RBP10.2□□□□□ -0.78
MATR3-215ENST00000510056 CARMIL1Q5VZK9 1371 aa10.2□□□□□ -0.78
MATR3-215ENST00000510056 UHRF1BP1LA0JNW5 1464 aa10.19□□□□□ -0.78
MATR3-215ENST00000510056 ZCCHC11Q5TAX3 1644 aaKnown RBP10.19□□□□□ -0.78
MATR3-215ENST00000510056 IQGAP2Q13576 1575 aa10.18□□□□□ -0.78
MATR3-215ENST00000510056 RBM25P49756 843 aaKnown RBP10.17□□□□□ -0.78
MATR3-215ENST00000510056 MKRN3Q13064 507 aaKnown RBP10.17□□□□□ -0.78
MATR3-215ENST00000510056 DISP1Q96F81 1524 aa10.17□□□□□ -0.78
MATR3-215ENST00000510056 KDM5BQ9UGL1 1544 aa10.17□□□□□ -0.78
MATR3-215ENST00000510056 KIF21BO75037 1637 aa10.17□□□□□ -0.78
MATR3-215ENST00000510056 CDK11BP21127 795 aaKnown RBP10.16□□□□□ -0.78
MATR3-215ENST00000510056 CDK11AQ9UQ88 783 aaPredicted RBP10.16□□□□□ -0.78
MATR3-215ENST00000510056 AEBP1Q8IUX7 1158 aa10.16□□□□□ -0.78
MATR3-215ENST00000510056 CCDC82Q8N4S0 544 aa10.15□□□□□ -0.78
MATR3-215ENST00000510056 CD109Q6YHK3 1445 aa10.14□□□□□ -0.79
MATR3-215ENST00000510056 WDR7Q9Y4E6 1490 aa10.14□□□□□ -0.79
MATR3-215ENST00000510056 LMTK3Q96Q04 1460 aa10.13□□□□□ -0.79
MATR3-215ENST00000510056 HOXD11P31277 338 aaPredicted RBP10.11□□□□□ -0.79
MATR3-215ENST00000510056 ZNF219Q9P2Y4 722 aaPredicted RBP10.11□□□□□ -0.79
MATR3-215ENST00000510056 HS6ST3Q8IZP7 471 aa10.11□□□□□ -0.79
MATR3-215ENST00000510056 PTPRMP28827 1452 aa10.1□□□□□ -0.79
MATR3-215ENST00000510056 ARID4BQ4LE39 1312 aaPredicted RBP10.09□□□□□ -0.79
MATR3-215ENST00000510056 KIAA0556O60303 1618 aa10.09□□□□□ -0.79
MATR3-215ENST00000510056 RGS22Q8NE09 1264 aa10.09□□□□□ -0.79
MATR3-215ENST00000510056 MAGI3Q5TCQ9 1506 aa10.09□□□□□ -0.79
MATR3-215ENST00000510056 HSPA2P54652 639 aa10.08□□□□□ -0.8
MATR3-215ENST00000510056 CFAP43Q8NDM7 1665 aa10.08□□□□□ -0.8
MATR3-215ENST00000510056 RAPGEF3O95398 923 aa10.08□□□□□ -0.8
MATR3-215ENST00000510056 UGGT2Q9NYU1 1516 aa10.07□□□□□ -0.8
MATR3-215ENST00000510056 ILDR2Q71H61 639 aa10.07□□□□□ -0.8
MATR3-215ENST00000510056 MSH5O43196 834 aa10.07□□□□□ -0.8
MATR3-215ENST00000510056 CADPS2Q86UW7 1296 aa10.07□□□□□ -0.8
MATR3-215ENST00000510056 ADAMTSL3P82987 1691 aa10.05□□□□□ -0.8
MATR3-215ENST00000510056 PCF11O94913 1555 aaKnown RBP10.05□□□□□ -0.8
MATR3-215ENST00000510056 DISP3Q9P2K9 1392 aa10.04□□□□□ -0.8
MATR3-215ENST00000510056 RAPGEF2Q9Y4G8 1499 aa10.04□□□□□ -0.8
MATR3-215ENST00000510056 SEMA3EO15041 775 aa10.04□□□□□ -0.8
MATR3-215ENST00000510056 CLUAP1Q96AJ1 413 aa10.04□□□□□ -0.8
MATR3-215ENST00000510056 MADDQ8WXG6 1647 aa10.03□□□□□ -0.8
MATR3-215ENST00000510056 P3H3Q8IVL6 736 aa10.03□□□□□ -0.8
MATR3-215ENST00000510056 CERKQ8TCT0 537 aa10.02□□□□□ -0.8
MATR3-215ENST00000510056 ARAP3Q8WWN8 1544 aa10.02□□□□□ -0.81
MATR3-215ENST00000510056 ABCA8O94911 1581 aa10.01□□□□□ -0.81
MATR3-215ENST00000510056 BCORL1Q5H9F3 1711 aa10□□□□□ -0.81
MATR3-215ENST00000510056 SOCS7O14512 581 aa10□□□□□ -0.81
MATR3-215ENST00000510056 PLCD3Q8N3E9 789 aa10□□□□□ -0.81
MATR3-215ENST00000510056 RIMS1Q86UR5 1692 aaKnown RBP10□□□□□ -0.81
MATR3-215ENST00000510056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
MATR3-215ENST00000510056 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
MATR3-215ENST00000510056 MLECQ14165 292 aa9.98□□□□□ -0.81
MATR3-215ENST00000510056 CTTNBP2Q8WZ74 1663 aa9.97□□□□□ -0.81
MATR3-215ENST00000510056 GOLGA3Q08378 1498 aa9.97□□□□□ -0.81
MATR3-215ENST00000510056 ATP10BO94823 1461 aa9.96□□□□□ -0.81
MATR3-215ENST00000510056 USP35Q9P2H5 1018 aa9.96□□□□□ -0.81
MATR3-215ENST00000510056 POLA2Q14181 598 aa9.96□□□□□ -0.82
MATR3-215ENST00000510056 U3KPZ7 1027 aaPredicted RBP9.96□□□□□ -0.82
MATR3-215ENST00000510056 HSP90B1P14625 803 aaKnown RBP9.95□□□□□ -0.82
MATR3-215ENST00000510056 GZF1Q9H116 711 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms