RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 KDM4FA0A1W2PPD8 638 aa21.65■■□□□ 1.06
SNF8-206ENST00000509989 DENND4BO75064 1496 aaPredicted RBP21.64■■□□□ 1.06
SNF8-206ENST00000509989 SCAPERQ9BY12 1400 aa21.63■■□□□ 1.05
SNF8-206ENST00000509989 MTUS2Q5JR59 1369 aa21.62■■□□□ 1.05
SNF8-206ENST00000509989 EHBP1L1Q8N3D4 1523 aa21.62■■□□□ 1.05
SNF8-206ENST00000509989 ARHGEF12Q9NZN5 1544 aa21.62■■□□□ 1.05
SNF8-206ENST00000509989 GPATCH8Q9UKJ3 1502 aaKnown RBP21.62■■□□□ 1.05
SNF8-206ENST00000509989 SIGLEC1Q9BZZ2 1709 aa21.61■■□□□ 1.05
SNF8-206ENST00000509989 EFCAB2Q5VUJ9 269 aa21.61■■□□□ 1.05
SNF8-206ENST00000509989 KANK4Q5T7N3 995 aaPredicted RBP21.59■■□□□ 1.05
SNF8-206ENST00000509989 SAMD9LQ8IVG5 1584 aa21.59■■□□□ 1.05
SNF8-206ENST00000509989 ITSN2Q9NZM3 1697 aa21.59■■□□□ 1.05
SNF8-206ENST00000509989 POGZQ7Z3K3 1410 aa21.58■■□□□ 1.05
SNF8-206ENST00000509989 YEATS2Q9ULM3 1422 aa21.57■■□□□ 1.04
SNF8-206ENST00000509989 ABCC1P33527 1531 aa21.57■■□□□ 1.04
SNF8-206ENST00000509989 ZMYM4Q5VZL5 1548 aa21.56■■□□□ 1.04
SNF8-206ENST00000509989 SUPT6HQ7KZ85 1726 aaKnown RBP21.55■■□□□ 1.04
SNF8-206ENST00000509989 ARHGEF40Q8TER5 1519 aa21.55■■□□□ 1.04
SNF8-206ENST00000509989 AFAP1Q8N556 730 aa21.54■■□□□ 1.04
SNF8-206ENST00000509989 ZNF777Q9ULD5 760 aaPredicted RBP21.54■■□□□ 1.04
SNF8-206ENST00000509989 TRAPPC8Q9Y2L5 1435 aa21.54■■□□□ 1.04
SNF8-206ENST00000509989 NCOA2Q15596 1464 aa21.53■■□□□ 1.04
SNF8-206ENST00000509989 LRRC9Q6ZRR7 1453 aa21.53■■□□□ 1.04
SNF8-206ENST00000509989 CCNB3Q8WWL7 1395 aa21.52■■□□□ 1.04
SNF8-206ENST00000509989 ZNF644Q9H582 1327 aaPredicted RBP21.52■■□□□ 1.03
SNF8-206ENST00000509989 ZFYVE16Q7Z3T8 1539 aa21.5■■□□□ 1.03
SNF8-206ENST00000509989 SYCP2Q9BX26 1530 aa21.5■■□□□ 1.03
SNF8-206ENST00000509989 KDM5CP41229 1560 aa21.5■■□□□ 1.03
SNF8-206ENST00000509989 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
SNF8-206ENST00000509989 MAP3K1Q13233 1512 aa21.49■■□□□ 1.03
SNF8-206ENST00000509989 HNRNPMP52272 730 aaKnown RBP eCLIP21.47■■□□□ 1.03
SNF8-206ENST00000509989 CFDP1Q9UEE9 299 aaPredicted RBP21.47■■□□□ 1.03
SNF8-206ENST00000509989 ABCA6Q8N139 1617 aa21.46■■□□□ 1.03
SNF8-206ENST00000509989 KIDINS220Q9ULH0 1771 aa21.46■■□□□ 1.03
SNF8-206ENST00000509989 ZNF518AQ6AHZ1 1483 aa21.45■■□□□ 1.03
SNF8-206ENST00000509989 BCORL1Q5H9F3 1711 aa21.45■■□□□ 1.02
SNF8-206ENST00000509989 HECW2Q9P2P5 1572 aa21.44■■□□□ 1.02
SNF8-206ENST00000509989 DIP2CQ9Y2E4 1556 aa21.44■■□□□ 1.02
SNF8-206ENST00000509989 ADAMTSL3P82987 1691 aa21.43■■□□□ 1.02
SNF8-206ENST00000509989 MAGI2Q86UL8 1455 aa21.42■■□□□ 1.02
SNF8-206ENST00000509989 MADDQ8WXG6 1647 aa21.39■■□□□ 1.01
SNF8-206ENST00000509989 ARID4BQ4LE39 1312 aaPredicted RBP21.38■■□□□ 1.01
SNF8-206ENST00000509989 ATP10AO60312 1499 aa21.38■■□□□ 1.01
SNF8-206ENST00000509989 CAMSAP2Q08AD1 1489 aa21.38■■□□□ 1.01
SNF8-206ENST00000509989 MBD5Q9P267 1494 aa21.38■■□□□ 1.01
SNF8-206ENST00000509989 MLH3Q9UHC1 1453 aa21.38■■□□□ 1.01
SNF8-206ENST00000509989 KIAA1107Q9UPP5 1409 aa21.37■■□□□ 1.01
SNF8-206ENST00000509989 MYT1LQ9UL68 1186 aa21.36■■□□□ 1.01
SNF8-206ENST00000509989 INO80Q9ULG1 1556 aaPredicted RBP21.35■■□□□ 1.01
SNF8-206ENST00000509989 C9orf84Q5VXU9 1444 aa21.34■■□□□ 1.01
SNF8-206ENST00000509989 RIMS1Q86UR5 1692 aaKnown RBP21.34■■□□□ 1.01
SNF8-206ENST00000509989 PLEKHH2Q8IVE3 1493 aa21.33■■□□□ 1.01
SNF8-206ENST00000509989 MLECQ14165 292 aa21.33■■□□□ 1.01
SNF8-206ENST00000509989 APLP2Q06481 763 aa21.32■■□□□ 1
SNF8-206ENST00000509989 ATP7AQ04656 1500 aa21.32■■□□□ 1
SNF8-206ENST00000509989 MYOM3Q5VTT5 1437 aa21.31■■□□□ 1
SNF8-206ENST00000509989 SPAG9O60271 1321 aaKnown RBP21.29■■□□□ 1
SNF8-206ENST00000509989 PPARGC1BQ86YN6 1023 aaKnown RBP21.29■■□□□ 1
SNF8-206ENST00000509989 FER1L4A9Z1Z3 1794 aa21.28■■□□□ 1
SNF8-206ENST00000509989 REREQ9P2R6 1566 aa21.27■■□□□ 1
SNF8-206ENST00000509989 ADGBQ8N7X0 1667 aa21.27■■□□□ 1
SNF8-206ENST00000509989 PTPRMP28827 1452 aa21.26■□□□□ 0.99
SNF8-206ENST00000509989 ARHGEF5Q12774 1597 aa21.25■□□□□ 0.99
SNF8-206ENST00000509989 PTPN23Q9H3S7 1636 aa21.25■□□□□ 0.99
SNF8-206ENST00000509989 CCDC141Q6ZP82 1450 aa21.25■□□□□ 0.99
SNF8-206ENST00000509989 MIA2Q96PC5 1412 aa21.22■□□□□ 0.99
SNF8-206ENST00000509989 PLXNC1O60486 1568 aa21.22■□□□□ 0.99
SNF8-206ENST00000509989 AGLP35573 1532 aa21.21■□□□□ 0.99
SNF8-206ENST00000509989 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
SNF8-206ENST00000509989 FGD6Q6ZV73 1430 aa21.2■□□□□ 0.98
SNF8-206ENST00000509989 A2MP01023 1474 aa21.19■□□□□ 0.98
SNF8-206ENST00000509989 CROCC2H7BZ55 1655 aa21.17■□□□□ 0.98
SNF8-206ENST00000509989 RTEL1-TNFRSF6BF6WH68 1400 aa21.16■□□□□ 0.98
SNF8-206ENST00000509989 TCOF1Q13428 1488 aaKnown RBP21.15■□□□□ 0.98
SNF8-206ENST00000509989 CEBPAP49715 358 aaPredicted RBP21.15■□□□□ 0.98
SNF8-206ENST00000509989 MAST1Q9Y2H9 1570 aa21.14■□□□□ 0.98
SNF8-206ENST00000509989 ABCC5O15440 1437 aa21.13■□□□□ 0.97
SNF8-206ENST00000509989 DNMT1P26358 1616 aaKnown RBP21.13■□□□□ 0.97
SNF8-206ENST00000509989 C3P01024 1663 aa21.12■□□□□ 0.97
SNF8-206ENST00000509989 CLTCQ00610 1675 aaKnown RBP21.1■□□□□ 0.97
SNF8-206ENST00000509989 RSPH4AQ5TD94 716 aa21.09■□□□□ 0.97
SNF8-206ENST00000509989 DAPK1P53355 1430 aa21.09■□□□□ 0.97
SNF8-206ENST00000509989 DHX29Q7Z478 1369 aaKnown RBP21.09■□□□□ 0.97
SNF8-206ENST00000509989 TSPY4P0CV99 314 aa21.08■□□□□ 0.97
SNF8-206ENST00000509989 TSPY10P0CW01 314 aa21.08■□□□□ 0.97
SNF8-206ENST00000509989 GGT6Q6P531 493 aa21.06■□□□□ 0.96
SNF8-206ENST00000509989 FAM50AQ14320 339 aaKnown RBP21.05■□□□□ 0.96
SNF8-206ENST00000509989 CHIC2Q9UKJ5 165 aa21.04■□□□□ 0.96
SNF8-206ENST00000509989 KIF3BO15066 747 aa21.03■□□□□ 0.96
SNF8-206ENST00000509989 LMTK3Q96Q04 1460 aa21.02■□□□□ 0.96
SNF8-206ENST00000509989 SHANK2Q9UPX8 1470 aa21.02■□□□□ 0.96
SNF8-206ENST00000509989 PTPRKQ15262 1439 aa21.02■□□□□ 0.96
SNF8-206ENST00000509989 MROH2AA6NES4 1674 aa21.01■□□□□ 0.95
SNF8-206ENST00000509989 RRP7BPQ9NSQ0 103 aa21■□□□□ 0.95
SNF8-206ENST00000509989 MROH1Q8NDA8 1641 aa20.99■□□□□ 0.95
SNF8-206ENST00000509989 RNF17Q9BXT8 1623 aaKnown RBP20.97■□□□□ 0.95
SNF8-206ENST00000509989 PREX1Q8TCU6 1659 aa20.97■□□□□ 0.95
SNF8-206ENST00000509989 KIF15Q9NS87 1388 aa20.97■□□□□ 0.95
SNF8-206ENST00000509989 DUOX2Q9NRD8 1548 aa20.96■□□□□ 0.95
SNF8-206ENST00000509989 HSPA2P54652 639 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms