RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 CLIP1P30622 1438 aa21.9■■□□□ 1.1
SDHA-210ENST00000509420 ATP1B4Q9UN42 357 aaPredicted RBP21.9■■□□□ 1.1
SDHA-210ENST00000509420 SCAPERQ9BY12 1400 aa21.89■■□□□ 1.1
SDHA-210ENST00000509420 MADDQ8WXG6 1647 aa21.89■■□□□ 1.09
SDHA-210ENST00000509420 CCDC18Q5T9S5 1454 aa21.89■■□□□ 1.09
SDHA-210ENST00000509420 ZFYVE16Q7Z3T8 1539 aa21.88■■□□□ 1.09
SDHA-210ENST00000509420 PTPRMP28827 1452 aa21.87■■□□□ 1.09
SDHA-210ENST00000509420 MAGI2Q86UL8 1455 aa21.86■■□□□ 1.09
SDHA-210ENST00000509420 PREX2Q70Z35 1606 aa21.86■■□□□ 1.09
SDHA-210ENST00000509420 KDM5CP41229 1560 aa21.85■■□□□ 1.09
SDHA-210ENST00000509420 CDK11AQ9UQ88 783 aaPredicted RBP21.84■■□□□ 1.09
SDHA-210ENST00000509420 CDC42BPAQ5VT25 1732 aa21.83■■□□□ 1.09
SDHA-210ENST00000509420 ARHGEF12Q9NZN5 1544 aa21.83■■□□□ 1.09
SDHA-210ENST00000509420 ARHGAP5Q13017 1502 aa21.82■■□□□ 1.08
SDHA-210ENST00000509420 EFCAB2Q5VUJ9 269 aa21.8■■□□□ 1.08
SDHA-210ENST00000509420 ABCC1P33527 1531 aa21.8■■□□□ 1.08
SDHA-210ENST00000509420 RIMS1Q86UR5 1692 aaKnown RBP21.79■■□□□ 1.08
SDHA-210ENST00000509420 ZNF518AQ6AHZ1 1483 aa21.77■■□□□ 1.07
SDHA-210ENST00000509420 ITSN2Q9NZM3 1697 aa21.76■■□□□ 1.07
SDHA-210ENST00000509420 DIP2CQ9Y2E4 1556 aa21.75■■□□□ 1.07
SDHA-210ENST00000509420 ATP10AO60312 1499 aa21.74■■□□□ 1.07
SDHA-210ENST00000509420 ABCA6Q8N139 1617 aa21.73■■□□□ 1.07
SDHA-210ENST00000509420 TRAPPC8Q9Y2L5 1435 aa21.73■■□□□ 1.07
SDHA-210ENST00000509420 AFAP1Q8N556 730 aa21.73■■□□□ 1.07
SDHA-210ENST00000509420 SAMD9LQ8IVG5 1584 aa21.73■■□□□ 1.07
SDHA-210ENST00000509420 CEP162Q5TB80 1403 aa21.72■■□□□ 1.07
SDHA-210ENST00000509420 GPATCH8Q9UKJ3 1502 aaKnown RBP21.72■■□□□ 1.07
SDHA-210ENST00000509420 ARID4BQ4LE39 1312 aaPredicted RBP21.72■■□□□ 1.07
SDHA-210ENST00000509420 C9orf84Q5VXU9 1444 aa21.72■■□□□ 1.07
SDHA-210ENST00000509420 LMTK3Q96Q04 1460 aa21.7■■□□□ 1.06
SDHA-210ENST00000509420 MLH3Q9UHC1 1453 aa21.7■■□□□ 1.06
SDHA-210ENST00000509420 REREQ9P2R6 1566 aa21.7■■□□□ 1.06
SDHA-210ENST00000509420 FER1L4A9Z1Z3 1794 aa21.69■■□□□ 1.06
SDHA-210ENST00000509420 KIDINS220Q9ULH0 1771 aa21.69■■□□□ 1.06
SDHA-210ENST00000509420 SYCP2Q9BX26 1530 aa21.65■■□□□ 1.06
SDHA-210ENST00000509420 TIAM1Q13009 1591 aa21.64■■□□□ 1.05
SDHA-210ENST00000509420 AGLP35573 1532 aa21.6■■□□□ 1.05
SDHA-210ENST00000509420 EHBP1L1Q8N3D4 1523 aa21.6■■□□□ 1.05
SDHA-210ENST00000509420 INO80Q9ULG1 1556 aaPredicted RBP21.58■■□□□ 1.05
SDHA-210ENST00000509420 MLECQ14165 292 aa21.58■■□□□ 1.05
SDHA-210ENST00000509420 LOC105371045A0A1W2PR82 267 aa21.57■■□□□ 1.04
SDHA-210ENST00000509420 KIAA1107Q9UPP5 1409 aa21.56■■□□□ 1.04
SDHA-210ENST00000509420 MTUS2Q5JR59 1369 aa21.56■■□□□ 1.04
SDHA-210ENST00000509420 PLXNC1O60486 1568 aa21.53■■□□□ 1.04
SDHA-210ENST00000509420 MBD5Q9P267 1494 aa21.53■■□□□ 1.04
SDHA-210ENST00000509420 CCNB3Q8WWL7 1395 aa21.53■■□□□ 1.04
SDHA-210ENST00000509420 HNRNPMP52272 730 aaKnown RBP eCLIP21.52■■□□□ 1.04
SDHA-210ENST00000509420 ATP7AQ04656 1500 aa21.51■■□□□ 1.03
SDHA-210ENST00000509420 ZNF644Q9H582 1327 aaPredicted RBP21.51■■□□□ 1.03
SDHA-210ENST00000509420 ZNF777Q9ULD5 760 aaPredicted RBP21.5■■□□□ 1.03
SDHA-210ENST00000509420 PLEKHH2Q8IVE3 1493 aa21.5■■□□□ 1.03
SDHA-210ENST00000509420 C3P01024 1663 aa21.5■■□□□ 1.03
SDHA-210ENST00000509420 VPS8Q8N3P4 1428 aa21.49■■□□□ 1.03
SDHA-210ENST00000509420 CFDP1Q9UEE9 299 aaPredicted RBP21.49■■□□□ 1.03
SDHA-210ENST00000509420 PREX1Q8TCU6 1659 aa21.49■■□□□ 1.03
SDHA-210ENST00000509420 NCOA2Q15596 1464 aa21.48■■□□□ 1.03
SDHA-210ENST00000509420 CEBPAP49715 358 aaPredicted RBP21.48■■□□□ 1.03
SDHA-210ENST00000509420 ILDR1Q86SU0 546 aaPredicted RBP21.48■■□□□ 1.03
SDHA-210ENST00000509420 HSPA2P54652 639 aa21.47■■□□□ 1.03
SDHA-210ENST00000509420 SUPT6HQ7KZ85 1726 aaKnown RBP21.46■■□□□ 1.03
SDHA-210ENST00000509420 PLPPR3Q6T4P5 718 aa21.45■■□□□ 1.02
SDHA-210ENST00000509420 SPAG9O60271 1321 aaKnown RBP21.44■■□□□ 1.02
SDHA-210ENST00000509420 LRRC9Q6ZRR7 1453 aa21.42■■□□□ 1.02
SDHA-210ENST00000509420 MYT1LQ9UL68 1186 aa21.41■■□□□ 1.02
SDHA-210ENST00000509420 ADGBQ8N7X0 1667 aa21.4■■□□□ 1.02
SDHA-210ENST00000509420 A2MP01023 1474 aa21.4■■□□□ 1.02
SDHA-210ENST00000509420 CAMSAP2Q08AD1 1489 aa21.4■■□□□ 1.02
SDHA-210ENST00000509420 STRCQ7RTU9 1775 aa21.4■■□□□ 1.02
SDHA-210ENST00000509420 MROH2AA6NES4 1674 aa21.4■■□□□ 1.02
SDHA-210ENST00000509420 MAP3K1Q13233 1512 aa21.39■■□□□ 1.02
SDHA-210ENST00000509420 SETD1BQ9UPS6 1966 aaKnown RBP21.38■■□□□ 1.01
SDHA-210ENST00000509420 RTEL1-TNFRSF6BF6WH68 1400 aa21.36■■□□□ 1.01
SDHA-210ENST00000509420 KANK4Q5T7N3 995 aaPredicted RBP21.35■■□□□ 1.01
SDHA-210ENST00000509420 CNTLNQ9NXG0 1405 aa21.35■■□□□ 1.01
SDHA-210ENST00000509420 CLTCQ00610 1675 aaKnown RBP21.34■■□□□ 1.01
SDHA-210ENST00000509420 CCDC141Q6ZP82 1450 aa21.34■■□□□ 1.01
SDHA-210ENST00000509420 ARHGEF5Q12774 1597 aa21.34■■□□□ 1.01
SDHA-210ENST00000509420 UHRF1BP1Q6BDS2 1440 aa21.3■■□□□ 1
SDHA-210ENST00000509420 ZMYM3Q14202 1370 aa21.28■■□□□ 1
SDHA-210ENST00000509420 NPATQ14207 1427 aa21.28■■□□□ 1
SDHA-210ENST00000509420 DHX29Q7Z478 1369 aaKnown RBP21.27■■□□□ 1
SDHA-210ENST00000509420 PTPRKQ15262 1439 aa21.26■□□□□ 0.99
SDHA-210ENST00000509420 MAST1Q9Y2H9 1570 aa21.26■□□□□ 0.99
SDHA-210ENST00000509420 MYOM3Q5VTT5 1437 aa21.24■□□□□ 0.99
SDHA-210ENST00000509420 MYO3AQ8NEV4 1616 aa21.24■□□□□ 0.99
SDHA-210ENST00000509420 ZNF142P52746 1687 aaPredicted RBP21.24■□□□□ 0.99
SDHA-210ENST00000509420 MIA2Q96PC5 1412 aa21.21■□□□□ 0.99
SDHA-210ENST00000509420 NCOA1Q15788 1441 aa21.21■□□□□ 0.99
SDHA-210ENST00000509420 FBXO41Q8TF61 875 aa21.2■□□□□ 0.98
SDHA-210ENST00000509420 GGT6Q6P531 493 aa21.19■□□□□ 0.98
SDHA-210ENST00000509420 RSPH4AQ5TD94 716 aa21.18■□□□□ 0.98
SDHA-210ENST00000509420 ESF1Q9H501 851 aaKnown RBP21.18■□□□□ 0.98
SDHA-210ENST00000509420 MROH1Q8NDA8 1641 aa21.18■□□□□ 0.98
SDHA-210ENST00000509420 RNF17Q9BXT8 1623 aaKnown RBP21.18■□□□□ 0.98
SDHA-210ENST00000509420 FAM135AQ9P2D6 1515 aa21.17■□□□□ 0.98
SDHA-210ENST00000509420 CAMSAP1Q5T5Y3 1602 aa21.16■□□□□ 0.98
SDHA-210ENST00000509420 CEP170BQ9Y4F5 1589 aaPredicted RBP21.16■□□□□ 0.98
SDHA-210ENST00000509420 KDM5DQ9BY66 1539 aa21.16■□□□□ 0.98
SDHA-210ENST00000509420 PPP6R1Q9UPN7 881 aa21.16■□□□□ 0.98
SDHA-210ENST00000509420 CROCC2H7BZ55 1655 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms