RNA–Protein interactions for RNA: ENST00000509290.1

SEL1L3-205, Transcript of SEL1L family member 3, humanhuman

TSL 2

Gene SEL1L3, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-205ENST00000509290 POTEB3A0JP26 581 aa11.43□□□□□ -0.58
SEL1L3-205ENST00000509290 HOXB1P14653 301 aaPredicted RBP11.43□□□□□ -0.58
SEL1L3-205ENST00000509290 POTEBQ6S5H4 581 aa11.43□□□□□ -0.58
SEL1L3-205ENST00000509290 ZNF710Q8N1W2 664 aa11.43□□□□□ -0.58
SEL1L3-205ENST00000509290 KIF3CO14782 793 aa11.41□□□□□ -0.58
SEL1L3-205ENST00000509290 NKX1-1Q15270 411 aaPredicted RBP11.41□□□□□ -0.58
SEL1L3-205ENST00000509290 FAM205CA6NFA0 338 aa11.4□□□□□ -0.58
SEL1L3-205ENST00000509290 HS3ST6Q96QI5 342 aa11.4□□□□□ -0.58
SEL1L3-205ENST00000509290 C2orf72A6NCS6 295 aa11.39□□□□□ -0.59
SEL1L3-205ENST00000509290 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
SEL1L3-205ENST00000509290 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
SEL1L3-205ENST00000509290 GPR153Q6NV75 609 aa11.35□□□□□ -0.59
SEL1L3-205ENST00000509290 ZSWIM6Q9HCJ5 1215 aa11.35□□□□□ -0.59
SEL1L3-205ENST00000509290 TMC2Q8TDI7 906 aa11.31□□□□□ -0.6
SEL1L3-205ENST00000509290 KRTAP3-3Q9BYR6 98 aa11.31□□□□□ -0.6
SEL1L3-205ENST00000509290 KRTAP3-2Q9BYR7 98 aa11.31□□□□□ -0.6
SEL1L3-205ENST00000509290 ARSIQ5FYB1 569 aa11.3□□□□□ -0.6
SEL1L3-205ENST00000509290 ERBB3P21860 1342 aa11.3□□□□□ -0.6
SEL1L3-205ENST00000509290 KHSRPQ92945 711 aaKnown RBP eCLIP11.29□□□□□ -0.6
SEL1L3-205ENST00000509290 DCAF8L2P0C7V8 631 aa11.27□□□□□ -0.61
SEL1L3-205ENST00000509290 VARS2Q5ST30 1063 aaKnown RBP11.27□□□□□ -0.61
SEL1L3-205ENST00000509290 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
SEL1L3-205ENST00000509290 SLC34A2O95436 690 aa11.23□□□□□ -0.61
SEL1L3-205ENST00000509290 GTPBP6O43824 516 aaPredicted RBP11.22□□□□□ -0.61
SEL1L3-205ENST00000509290 GPHNQ9NQX3 736 aaPredicted RBP11.22□□□□□ -0.61
SEL1L3-205ENST00000509290 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
SEL1L3-205ENST00000509290 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.61
SEL1L3-205ENST00000509290 FOXK1P85037 733 aa11.2□□□□□ -0.62
SEL1L3-205ENST00000509290 ZNF316A6NFI3 1004 aaPredicted RBP11.19□□□□□ -0.62
SEL1L3-205ENST00000509290 NUDT7P0C024 238 aa11.19□□□□□ -0.62
SEL1L3-205ENST00000509290 DSG2Q14126 1118 aa11.19□□□□□ -0.62
SEL1L3-205ENST00000509290 MMRN1Q13201 1228 aa11.18□□□□□ -0.62
SEL1L3-205ENST00000509290 PLPP6Q8IY26 295 aa11.18□□□□□ -0.62
SEL1L3-205ENST00000509290 ZNF687Q8N1G0 1237 aa11.16□□□□□ -0.62
SEL1L3-205ENST00000509290 CRISPLD2Q9H0B8 497 aa11.15□□□□□ -0.62
SEL1L3-205ENST00000509290 PTCD2Q8WV60 388 aaKnown RBP11.14□□□□□ -0.63
SEL1L3-205ENST00000509290 NCKAP5LQ9HCH0 1330 aa11.13□□□□□ -0.63
SEL1L3-205ENST00000509290 LHX6Q9UPM6 363 aa11.13□□□□□ -0.63
SEL1L3-205ENST00000509290 KDM4FA0A1W2PPD8 638 aa11.11□□□□□ -0.63
SEL1L3-205ENST00000509290 RTN4Q9NQC3 1192 aaKnown RBP11.1□□□□□ -0.63
SEL1L3-205ENST00000509290 AMER1Q5JTC6 1135 aaPredicted RBP11.09□□□□□ -0.63
SEL1L3-205ENST00000509290 PPP1R15BQ5SWA1 713 aa11.07□□□□□ -0.64
SEL1L3-205ENST00000509290 POTEEQ6S8J3 1075 aa11.05□□□□□ -0.64
SEL1L3-205ENST00000509290 PDE4AP27815 886 aa11.04□□□□□ -0.64
SEL1L3-205ENST00000509290 CADPS2Q86UW7 1296 aa11.04□□□□□ -0.64
SEL1L3-205ENST00000509290 OXER1Q8TDS5 423 aa11.04□□□□□ -0.64
SEL1L3-205ENST00000509290 UPF1Q92900 1129 aaKnown RBP eCLIP11.02□□□□□ -0.65
SEL1L3-205ENST00000509290 BBXQ8WY36 941 aaPredicted RBP11.01□□□□□ -0.65
SEL1L3-205ENST00000509290 LARP6Q9BRS8 491 aaKnown RBP11.01□□□□□ -0.65
SEL1L3-205ENST00000509290 TBC1D12O60347 775 aa11□□□□□ -0.65
SEL1L3-205ENST00000509290 LSM11P83369 360 aaKnown RBP eCLIP11□□□□□ -0.65
SEL1L3-205ENST00000509290 MFSD10Q14728 455 aa11□□□□□ -0.65
SEL1L3-205ENST00000509290 AXIN2Q9Y2T1 843 aa11□□□□□ -0.65
SEL1L3-205ENST00000509290 PBX2P40425 430 aa10.99□□□□□ -0.65
SEL1L3-205ENST00000509290 ANKRD13DQ6ZTN6 518 aa10.99□□□□□ -0.65
SEL1L3-205ENST00000509290 DDX27Q96GQ7 796 aaKnown RBP10.99□□□□□ -0.65
SEL1L3-205ENST00000509290 PSDA5PKW4 1024 aaPredicted RBP10.97□□□□□ -0.65
SEL1L3-205ENST00000509290 MYT1LQ9UL68 1186 aa10.94□□□□□ -0.66
SEL1L3-205ENST00000509290 RNF166Q96A37 237 aaPredicted RBP10.93□□□□□ -0.66
SEL1L3-205ENST00000509290 ARHGAP33O14559 1287 aa10.92□□□□□ -0.66
SEL1L3-205ENST00000509290 PPP4R3BQ5MIZ7 849 aa10.92□□□□□ -0.66
SEL1L3-205ENST00000509290 EMILIN3Q9NT22 766 aa10.92□□□□□ -0.66
SEL1L3-205ENST00000509290 PTGER2P43116 358 aa10.9□□□□□ -0.66
SEL1L3-205ENST00000509290 PSEN2P49810 448 aa10.9□□□□□ -0.66
SEL1L3-205ENST00000509290 DMRTA1Q5VZB9 504 aa10.89□□□□□ -0.67
SEL1L3-205ENST00000509290 EVI5O60447 810 aa10.88□□□□□ -0.67
SEL1L3-205ENST00000509290 ZNF454Q8N9F8 522 aa10.87□□□□□ -0.67
SEL1L3-205ENST00000509290 SPRYD3Q8NCJ5 442 aa10.87□□□□□ -0.67
SEL1L3-205ENST00000509290 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
SEL1L3-205ENST00000509290 ADGRD1Q6QNK2 874 aa10.86□□□□□ -0.67
SEL1L3-205ENST00000509290 FOSBP53539 338 aa10.85□□□□□ -0.67
SEL1L3-205ENST00000509290 KCNK17Q96T54 332 aa10.85□□□□□ -0.67
SEL1L3-205ENST00000509290 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.85□□□□□ -0.67
SEL1L3-205ENST00000509290 MAP3K9P80192 1104 aa10.84□□□□□ -0.67
SEL1L3-205ENST00000509290 CAMK2BQ13554 666 aa10.83□□□□□ -0.68
SEL1L3-205ENST00000509290 JPH4Q96JJ6 628 aa10.83□□□□□ -0.68
SEL1L3-205ENST00000509290 TK2O00142 265 aa10.81□□□□□ -0.68
SEL1L3-205ENST00000509290 PAXIP1Q6ZW49 1069 aaPredicted RBP10.81□□□□□ -0.68
SEL1L3-205ENST00000509290 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
SEL1L3-205ENST00000509290 HRO43593 1189 aa10.8□□□□□ -0.68
SEL1L3-205ENST00000509290 CFAP44Q96MT7 982 aa10.8□□□□□ -0.68
SEL1L3-205ENST00000509290 ADAM33Q9BZ11 813 aa10.78□□□□□ -0.68
SEL1L3-205ENST00000509290 DPYSL4O14531 572 aa10.77□□□□□ -0.69
SEL1L3-205ENST00000509290 ZDHHC16Q969W1 377 aa10.77□□□□□ -0.69
SEL1L3-205ENST00000509290 KCNH8Q96L42 1107 aa10.76□□□□□ -0.69
SEL1L3-205ENST00000509290 VPS9D1Q9Y2B5 631 aa10.75□□□□□ -0.69
SEL1L3-205ENST00000509290 PCDHGA10Q9Y5H3 936 aa10.75□□□□□ -0.69
SEL1L3-205ENST00000509290 PTPREP23469 700 aa10.74□□□□□ -0.69
SEL1L3-205ENST00000509290 SLC4A5Q9BY07 1137 aa10.71□□□□□ -0.69
SEL1L3-205ENST00000509290 ZBED2Q9BTP6 218 aa10.7□□□□□ -0.7
SEL1L3-205ENST00000509290 PHF14O94880 888 aa10.69□□□□□ -0.7
SEL1L3-205ENST00000509290 TYW1BQ6NUM6 668 aa10.68□□□□□ -0.7
SEL1L3-205ENST00000509290 FBXW7Q969H0 707 aa10.67□□□□□ -0.7
SEL1L3-205ENST00000509290 BHMG1C9JSJ3 638 aaPredicted RBP10.66□□□□□ -0.7
SEL1L3-205ENST00000509290 COL9A1P20849 921 aa10.66□□□□□ -0.7
SEL1L3-205ENST00000509290 PDIA6Q15084 440 aa10.66□□□□□ -0.7
SEL1L3-205ENST00000509290 PPP1R3GB7ZBB8 358 aa10.65□□□□□ -0.7
SEL1L3-205ENST00000509290 E2F4Q16254 413 aa10.65□□□□□ -0.7
SEL1L3-205ENST00000509290 DDX12PQ92771 950 aa10.65□□□□□ -0.7
SEL1L3-205ENST00000509290 KCTD12Q96CX2 325 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms