RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 ANKRD13DQ6ZTN6 518 aa9.41□□□□□ -0.9
XRCC4-204ENST00000509268 ZNF316A6NFI3 1004 aaPredicted RBP9.4□□□□□ -0.9
XRCC4-204ENST00000509268 MS4A4AQ96JQ5 239 aa9.38□□□□□ -0.91
XRCC4-204ENST00000509268 LSM11P83369 360 aaKnown RBP eCLIP9.37□□□□□ -0.911e-11■■■■■ 50.1
XRCC4-204ENST00000509268 RIOK3O14730 519 aaKnown RBP9.37□□□□□ -0.91
XRCC4-204ENST00000509268 PBX2P40425 430 aa9.36□□□□□ -0.91
XRCC4-204ENST00000509268 PHF8Q9UPP1 1060 aa9.35□□□□□ -0.91
XRCC4-204ENST00000509268 VGFO15240 615 aaPredicted RBP9.34□□□□□ -0.91
XRCC4-204ENST00000509268 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.32□□□□□ -0.92
XRCC4-204ENST00000509268 NLRP6P59044 892 aa9.32□□□□□ -0.92
XRCC4-204ENST00000509268 ZFP91Q96JP5 570 aaPredicted RBP9.32□□□□□ -0.92
XRCC4-204ENST00000509268 KHSRPQ92945 711 aaKnown RBP eCLIP9.3□□□□□ -0.926e-10■■■□□ 17.2
XRCC4-204ENST00000509268 HCSTQ9UBK5 93 aa9.29□□□□□ -0.92
XRCC4-204ENST00000509268 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
XRCC4-204ENST00000509268 RNF25Q96BH1 459 aaPredicted RBP9.27□□□□□ -0.93
XRCC4-204ENST00000509268 TAOK2Q9UL54 1235 aa9.27□□□□□ -0.93
XRCC4-204ENST00000509268 FBXO22Q8NEZ5 403 aa9.25□□□□□ -0.93
XRCC4-204ENST00000509268 KIF3CO14782 793 aa9.24□□□□□ -0.93
XRCC4-204ENST00000509268 SLC34A2O95436 690 aa9.24□□□□□ -0.93
XRCC4-204ENST00000509268 NUDT7P0C024 238 aa9.23□□□□□ -0.93
XRCC4-204ENST00000509268 LHX6Q9UPM6 363 aa9.22□□□□□ -0.93
XRCC4-204ENST00000509268 PSDA5PKW4 1024 aaPredicted RBP9.2□□□□□ -0.94
XRCC4-204ENST00000509268 C2orf72A6NCS6 295 aa9.2□□□□□ -0.94
XRCC4-204ENST00000509268 POTEEQ6S8J3 1075 aa9.2□□□□□ -0.94
XRCC4-204ENST00000509268 PCDHGA4Q9Y5G9 962 aa9.2□□□□□ -0.94
XRCC4-204ENST00000509268 ARHGAP33O14559 1287 aa9.19□□□□□ -0.94
XRCC4-204ENST00000509268 AXIN2Q9Y2T1 843 aa9.19□□□□□ -0.94
XRCC4-204ENST00000509268 BCL11BQ9C0K0 894 aaPredicted RBP9.18□□□□□ -0.94
XRCC4-204ENST00000509268 ADGRD1Q6QNK2 874 aa9.17□□□□□ -0.94
XRCC4-204ENST00000509268 TK2O00142 265 aa9.16□□□□□ -0.94
XRCC4-204ENST00000509268 MFRPQ9BY79 579 aa9.16□□□□□ -0.94
XRCC4-204ENST00000509268 TMC2Q8TDI7 906 aa9.15□□□□□ -0.95
XRCC4-204ENST00000509268 STK24Q9Y6E0 443 aa9.15□□□□□ -0.95
XRCC4-204ENST00000509268 HRO43593 1189 aa9.1□□□□□ -0.95
XRCC4-204ENST00000509268 KDM4FA0A1W2PPD8 638 aa9.08□□□□□ -0.96
XRCC4-204ENST00000509268 STK25O00506 426 aa9.07□□□□□ -0.96
XRCC4-204ENST00000509268 RGS20O76081 388 aa9.07□□□□□ -0.96
XRCC4-204ENST00000509268 STAC3Q96MF2 364 aa9.07□□□□□ -0.96
XRCC4-204ENST00000509268 PTCD2Q8WV60 388 aaKnown RBP9.07□□□□□ -0.96
XRCC4-204ENST00000509268 DMRTA1Q5VZB9 504 aa9.04□□□□□ -0.96
XRCC4-204ENST00000509268 PPP4R3BQ5MIZ7 849 aa9.03□□□□□ -0.96
XRCC4-204ENST00000509268 KCTD12Q96CX2 325 aaKnown RBP9.03□□□□□ -0.96
XRCC4-204ENST00000509268 PSEN2P49810 448 aa9.02□□□□□ -0.97
XRCC4-204ENST00000509268 IFFO2Q5TF58 517 aa9.02□□□□□ -0.97
XRCC4-204ENST00000509268 TBC1D12O60347 775 aa9.01□□□□□ -0.97
XRCC4-204ENST00000509268 KCNH8Q96L42 1107 aa9.01□□□□□ -0.97
XRCC4-204ENST00000509268 FOXK1P85037 733 aa8.98□□□□□ -0.97
XRCC4-204ENST00000509268 ECM2O94769 699 aaPredicted RBP8.95□□□□□ -0.98
XRCC4-204ENST00000509268 PLPP6Q8IY26 295 aa8.95□□□□□ -0.98
XRCC4-204ENST00000509268 PPP1R37O75864 691 aa8.95□□□□□ -0.98
XRCC4-204ENST00000509268 SLC4A5Q9BY07 1137 aa8.95□□□□□ -0.98
XRCC4-204ENST00000509268 IRX2Q9BZI1 471 aaPredicted RBP8.95□□□□□ -0.98
XRCC4-204ENST00000509268 VPS9D1Q9Y2B5 631 aa8.95□□□□□ -0.98
XRCC4-204ENST00000509268 KCNK17Q96T54 332 aa8.94□□□□□ -0.98
XRCC4-204ENST00000509268 GPHNQ9NQX3 736 aaPredicted RBP8.94□□□□□ -0.98
XRCC4-204ENST00000509268 PTPN5P54829 565 aa8.92□□□□□ -0.98
XRCC4-204ENST00000509268 A0A0G2JS52 829 aa8.89□□□□□ -0.99
XRCC4-204ENST00000509268 BHMG1C9JSJ3 638 aaPredicted RBP8.87□□□□□ -0.99
XRCC4-204ENST00000509268 DSG2Q14126 1118 aa8.87□□□□□ -0.99
XRCC4-204ENST00000509268 THSD4Q6ZMP0 1018 aa8.87□□□□□ -0.99
XRCC4-204ENST00000509268 BCL2L12Q9HB09 334 aa8.87□□□□□ -0.99
XRCC4-204ENST00000509268 GOLGA8CPA6NN73 597 aa8.86□□□□□ -0.99
XRCC4-204ENST00000509268 RGL2O15211 777 aa8.86□□□□□ -0.99
XRCC4-204ENST00000509268 OXER1Q8TDS5 423 aa8.85□□□□□ -0.99
XRCC4-204ENST00000509268 PTPREP23469 700 aa8.83□□□□□ -1
XRCC4-204ENST00000509268 ZNF454Q8N9F8 522 aa8.83□□□□□ -1
XRCC4-204ENST00000509268 WNT2BQ93097 391 aa8.83□□□□□ -1
XRCC4-204ENST00000509268 MRPL50Q8N5N7 158 aaKnown RBP8.82□□□□□ -1
XRCC4-204ENST00000509268 PKD2Q13563 968 aa8.81□□□□□ -1
XRCC4-204ENST00000509268 ZBED2Q9BTP6 218 aa8.81□□□□□ -1
XRCC4-204ENST00000509268 FOSBP53539 338 aa8.8□□□□□ -1
XRCC4-204ENST00000509268 NBPF3Q9H094 633 aa8.79□□□□□ -1
XRCC4-204ENST00000509268 ANO8Q9HCE9 1232 aaPredicted RBP8.77□□□□□ -1.01
XRCC4-204ENST00000509268 UPF1Q92900 1129 aaKnown RBP eCLIP8.76□□□□□ -1.01
XRCC4-204ENST00000509268 ITGBL1O95965 494 aaPredicted RBP8.75□□□□□ -1.01
XRCC4-204ENST00000509268 JPH4Q96JJ6 628 aa8.75□□□□□ -1.01
XRCC4-204ENST00000509268 HS6ST3Q8IZP7 471 aa8.74□□□□□ -1.01
XRCC4-204ENST00000509268 ZDHHC16Q969W1 377 aa8.73□□□□□ -1.01
XRCC4-204ENST00000509268 CRISPLD2Q9H0B8 497 aa8.72□□□□□ -1.01
XRCC4-204ENST00000509268 PPP1R15BQ5SWA1 713 aa8.71□□□□□ -1.02
XRCC4-204ENST00000509268 ANKK1Q8NFD2 765 aa8.71□□□□□ -1.02
XRCC4-204ENST00000509268 RYDENQ9NUL5 291 aaKnown RBP8.71□□□□□ -1.02
XRCC4-204ENST00000509268 Q6ZNB5 142 aa8.7□□□□□ -1.02
XRCC4-204ENST00000509268 NYAP1Q6ZVC0 841 aa8.7□□□□□ -1.02
XRCC4-204ENST00000509268 ADAM33Q9BZ11 813 aa8.69□□□□□ -1.02
XRCC4-204ENST00000509268 RABGEF1Q9UJ41 708 aa8.69□□□□□ -1.02
XRCC4-204ENST00000509268 EVI5O60447 810 aa8.69□□□□□ -1.02
XRCC4-204ENST00000509268 PDE4AP27815 886 aa8.68□□□□□ -1.02
XRCC4-204ENST00000509268 LAPTM4AQ15012 233 aa8.68□□□□□ -1.02
XRCC4-204ENST00000509268 LAPTM4BQ86VI4 370 aa8.68□□□□□ -1.02
XRCC4-204ENST00000509268 PPP1R3GB7ZBB8 358 aa8.67□□□□□ -1.02
XRCC4-204ENST00000509268 DNAJC5Q9H3Z4 198 aa8.66□□□□□ -1.02
XRCC4-204ENST00000509268 SOWAHBA6NEL2 793 aa8.64□□□□□ -1.03
XRCC4-204ENST00000509268 KCNC4Q03721 635 aa8.64□□□□□ -1.03
XRCC4-204ENST00000509268 ONECUT3O60422 494 aaPredicted RBP8.63□□□□□ -1.03
XRCC4-204ENST00000509268 MAP3K9P80192 1104 aa8.61□□□□□ -1.03
XRCC4-204ENST00000509268 BCAMP50895 628 aa8.61□□□□□ -1.03
XRCC4-204ENST00000509268 FBXW7Q969H0 707 aa8.61□□□□□ -1.03
XRCC4-204ENST00000509268 NCKAP5LQ9HCH0 1330 aa8.6□□□□□ -1.03
XRCC4-204ENST00000509268 CHGAP10645 457 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms