RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 KIF12Q96FN5 646 aa7.99□□□□□ -1.13
CALCOCO2-213ENST00000509112 GRIN2AQ12879 1464 aa7.99□□□□□ -1.13
CALCOCO2-213ENST00000509112 PDAP1Q13442 181 aaKnown RBP7.98□□□□□ -1.13
CALCOCO2-213ENST00000509112 ADAMTS12P58397 1594 aa7.97□□□□□ -1.13
CALCOCO2-213ENST00000509112 RYDENQ9NUL5 291 aaKnown RBP7.97□□□□□ -1.13
CALCOCO2-213ENST00000509112 ZRANB1Q9UGI0 708 aa7.97□□□□□ -1.13
CALCOCO2-213ENST00000509112 CEP170Q5SW79 1584 aa7.97□□□□□ -1.13
CALCOCO2-213ENST00000509112 KIF13AQ9H1H9 1805 aa7.96□□□□□ -1.14
CALCOCO2-213ENST00000509112 BIVM-ERCC5R4GMW8 1640 aa7.96□□□□□ -1.14
CALCOCO2-213ENST00000509112 STK25O00506 426 aa7.95□□□□□ -1.14
CALCOCO2-213ENST00000509112 PCDHB13Q9Y5F0 798 aa7.95□□□□□ -1.14
CALCOCO2-213ENST00000509112 ERICH3Q5RHP9 1530 aa7.94□□□□□ -1.14
CALCOCO2-213ENST00000509112 ERCC6L2Q5T890 1561 aa7.94□□□□□ -1.14
CALCOCO2-213ENST00000509112 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.94□□□□□ -1.14
CALCOCO2-213ENST00000509112 ZFP91Q96JP5 570 aaPredicted RBP7.94□□□□□ -1.14
CALCOCO2-213ENST00000509112 FHAD1B1AJZ9 1412 aa7.94□□□□□ -1.14
CALCOCO2-213ENST00000509112 WRNQ14191 1432 aaPredicted RBP eCLIP7.94□□□□□ -1.14
CALCOCO2-213ENST00000509112 TOP2BQ02880 1626 aa7.93□□□□□ -1.14
CALCOCO2-213ENST00000509112 MAP3K13O43283 966 aa7.93□□□□□ -1.14
CALCOCO2-213ENST00000509112 SPRYD3Q8NCJ5 442 aa7.93□□□□□ -1.14
CALCOCO2-213ENST00000509112 BCL11BQ9C0K0 894 aaPredicted RBP7.92□□□□□ -1.14
CALCOCO2-213ENST00000509112 IFNL1Q8IU54 200 aa7.91□□□□□ -1.14
CALCOCO2-213ENST00000509112 MAPKBP1O60336 1514 aa7.9□□□□□ -1.14
CALCOCO2-213ENST00000509112 PSEN1P49768 467 aa7.9□□□□□ -1.14
CALCOCO2-213ENST00000509112 PCDHB8Q9UN66 801 aa7.9□□□□□ -1.14
CALCOCO2-213ENST00000509112 STK24Q9Y6E0 443 aa7.89□□□□□ -1.15
CALCOCO2-213ENST00000509112 ABCC10Q5T3U5 1492 aa7.88□□□□□ -1.15
CALCOCO2-213ENST00000509112 PAXIP1Q6ZW49 1069 aaPredicted RBP7.88□□□□□ -1.15
CALCOCO2-213ENST00000509112 HAX1O00165 279 aa7.87□□□□□ -1.15
CALCOCO2-213ENST00000509112 PHF12Q96QT6 1004 aa7.87□□□□□ -1.15
CALCOCO2-213ENST00000509112 RUSC2Q8N2Y8 1516 aa7.87□□□□□ -1.15
CALCOCO2-213ENST00000509112 DIP2BQ9P265 1576 aa7.86□□□□□ -1.15
CALCOCO2-213ENST00000509112 NKX1-1Q15270 411 aaPredicted RBP7.86□□□□□ -1.15
CALCOCO2-213ENST00000509112 PRG4Q92954 1404 aaPredicted RBP7.86□□□□□ -1.15
CALCOCO2-213ENST00000509112 TIE1P35590 1138 aa7.85□□□□□ -1.15
CALCOCO2-213ENST00000509112 VSIG10Q8N0Z9 540 aa7.85□□□□□ -1.15
CALCOCO2-213ENST00000509112 JPH4Q96JJ6 628 aa7.85□□□□□ -1.15
CALCOCO2-213ENST00000509112 SOX12O15370 315 aa7.84□□□□□ -1.15
CALCOCO2-213ENST00000509112 GTPBP6O43824 516 aaPredicted RBP7.84□□□□□ -1.15
CALCOCO2-213ENST00000509112 CFAP44Q96MT7 982 aa7.84□□□□□ -1.15
CALCOCO2-213ENST00000509112 ADCY10Q96PN6 1610 aa7.83□□□□□ -1.16
CALCOCO2-213ENST00000509112 POTEHQ6S545 545 aa7.83□□□□□ -1.16
CALCOCO2-213ENST00000509112 KDM6BO15054 1643 aa7.82□□□□□ -1.16
CALCOCO2-213ENST00000509112 HAP1P54257 671 aaPredicted RBP7.82□□□□□ -1.16
CALCOCO2-213ENST00000509112 MS4A3Q96HJ5 214 aa7.82□□□□□ -1.16
CALCOCO2-213ENST00000509112 FAM69CQ0P6D2 419 aa7.81□□□□□ -1.16
CALCOCO2-213ENST00000509112 KIAA0586Q9BVV6 1533 aa7.81□□□□□ -1.16
CALCOCO2-213ENST00000509112 CUL7Q14999 1698 aa7.8□□□□□ -1.16
CALCOCO2-213ENST00000509112 GLI2P10070 1586 aa7.79□□□□□ -1.16
CALCOCO2-213ENST00000509112 NLRP6P59044 892 aa7.78□□□□□ -1.16
CALCOCO2-213ENST00000509112 KDM4FA0A1W2PPD8 638 aa7.77□□□□□ -1.17
CALCOCO2-213ENST00000509112 TMEM106CQ9BVX2 250 aa7.77□□□□□ -1.17
CALCOCO2-213ENST00000509112 CABP2Q9NPB3 220 aa7.77□□□□□ -1.17
CALCOCO2-213ENST00000509112 EVX2Q03828 476 aa7.76□□□□□ -1.17
CALCOCO2-213ENST00000509112 GOLGA2Q08379 1002 aa7.76□□□□□ -1.17
CALCOCO2-213ENST00000509112 MFRPQ9BY79 579 aa7.76□□□□□ -1.17
CALCOCO2-213ENST00000509112 UHRF1BP1LA0JNW5 1464 aa7.75□□□□□ -1.17
CALCOCO2-213ENST00000509112 TSPOAP1O95153 1857 aa7.75□□□□□ -1.17
CALCOCO2-213ENST00000509112 IGF1RP08069 1367 aa7.75□□□□□ -1.17
CALCOCO2-213ENST00000509112 TTLL13PA6NNM8 815 aa7.75□□□□□ -1.17
CALCOCO2-213ENST00000509112 ILDR1Q86SU0 546 aaPredicted RBP7.75□□□□□ -1.17
CALCOCO2-213ENST00000509112 EFCAB3Q8N7B9 438 aa7.75□□□□□ -1.17
CALCOCO2-213ENST00000509112 PPRC1Q5VV67 1664 aaKnown RBP7.75□□□□□ -1.17
CALCOCO2-213ENST00000509112 PLB1Q6P1J6 1458 aa7.75□□□□□ -1.17
CALCOCO2-213ENST00000509112 ABCC2Q92887 1545 aa7.74□□□□□ -1.17
CALCOCO2-213ENST00000509112 GALR2O43603 387 aaPredicted RBP7.74□□□□□ -1.17
CALCOCO2-213ENST00000509112 FBXO22Q8NEZ5 403 aa7.74□□□□□ -1.17
CALCOCO2-213ENST00000509112 KIF27Q86VH2 1401 aa7.74□□□□□ -1.17
CALCOCO2-213ENST00000509112 ASTLQ6HA08 431 aaPredicted RBP7.73□□□□□ -1.17
CALCOCO2-213ENST00000509112 BMP2KQ9NSY1 1161 aaPredicted RBP7.73□□□□□ -1.17
CALCOCO2-213ENST00000509112 TNIKQ9UKE5 1360 aa7.72□□□□□ -1.17
CALCOCO2-213ENST00000509112 PTPRGP23470 1445 aa7.72□□□□□ -1.17
CALCOCO2-213ENST00000509112 CARMIL2Q6F5E8 1435 aa7.72□□□□□ -1.17
CALCOCO2-213ENST00000509112 MKRN3Q13064 507 aaKnown RBP7.72□□□□□ -1.17
CALCOCO2-213ENST00000509112 IER5LQ5T953 404 aa7.72□□□□□ -1.17
CALCOCO2-213ENST00000509112 TSHZ2Q9NRE2 1034 aa7.72□□□□□ -1.17
CALCOCO2-213ENST00000509112 TRPC6Q9Y210 931 aa7.72□□□□□ -1.17
CALCOCO2-213ENST00000509112 MAP3K4Q9Y6R4 1608 aa7.7□□□□□ -1.18
CALCOCO2-213ENST00000509112 KDM5BQ9UGL1 1544 aa7.7□□□□□ -1.18
CALCOCO2-213ENST00000509112 SUPT5HO00267 1087 aaKnown RBP7.7□□□□□ -1.18
CALCOCO2-213ENST00000509112 GABBR2O75899 941 aa7.7□□□□□ -1.18
CALCOCO2-213ENST00000509112 IQGAP2Q13576 1575 aa7.7□□□□□ -1.18
CALCOCO2-213ENST00000509112 ASXL2Q76L83 1435 aa7.69□□□□□ -1.18
CALCOCO2-213ENST00000509112 TEX14Q8IWB6 1497 aa7.69□□□□□ -1.18
CALCOCO2-213ENST00000509112 CARMIL1Q5VZK9 1371 aa7.69□□□□□ -1.18
CALCOCO2-213ENST00000509112 UACAQ9BZF9 1416 aa7.69□□□□□ -1.18
CALCOCO2-213ENST00000509112 ADGRL1O94910 1474 aa7.68□□□□□ -1.18
CALCOCO2-213ENST00000509112 ATMINO43313 823 aaPredicted RBP7.68□□□□□ -1.18
CALCOCO2-213ENST00000509112 PHF8Q9UPP1 1060 aa7.68□□□□□ -1.18
CALCOCO2-213ENST00000509112 TRIM35Q9UPQ4 493 aa7.68□□□□□ -1.18
CALCOCO2-213ENST00000509112 EPRSP07814 1512 aaKnown RBP7.68□□□□□ -1.18
CALCOCO2-213ENST00000509112 UGGT2Q9NYU1 1516 aa7.68□□□□□ -1.18
CALCOCO2-213ENST00000509112 KDM2AQ9Y2K7 1162 aa7.67□□□□□ -1.18
CALCOCO2-213ENST00000509112 DISP1Q96F81 1524 aa7.67□□□□□ -1.18
CALCOCO2-213ENST00000509112 COL17A1Q9UMD9 1497 aaPredicted RBP7.66□□□□□ -1.18
CALCOCO2-213ENST00000509112 ZCCHC11Q5TAX3 1644 aaKnown RBP7.66□□□□□ -1.18
CALCOCO2-213ENST00000509112 ATN1P54259 1190 aaPredicted RBP7.65□□□□□ -1.18
CALCOCO2-213ENST00000509112 SP7Q8TDD2 431 aaPredicted RBP7.65□□□□□ -1.18
CALCOCO2-213ENST00000509112 CFAP43Q8NDM7 1665 aa7.64□□□□□ -1.19
CALCOCO2-213ENST00000509112 HECW2Q9P2P5 1572 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms