RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 ARHGEF40Q8TER5 1519 aa29.81■■■□□ 2.36
UBE3D-207ENST00000509102 POGZQ7Z3K3 1410 aa29.8■■■□□ 2.36
UBE3D-207ENST00000509102 ARID4BQ4LE39 1312 aaPredicted RBP29.8■■■□□ 2.36
UBE3D-207ENST00000509102 MAGI2Q86UL8 1455 aa29.8■■■□□ 2.36
UBE3D-207ENST00000509102 LOC105371045A0A1W2PR82 267 aa29.77■■■□□ 2.36
UBE3D-207ENST00000509102 ZFYVE16Q7Z3T8 1539 aa29.76■■■□□ 2.36
UBE3D-207ENST00000509102 MTUS2Q5JR59 1369 aa29.76■■■□□ 2.35
UBE3D-207ENST00000509102 PREX2Q70Z35 1606 aa29.75■■■□□ 2.35
UBE3D-207ENST00000509102 ZNF518AQ6AHZ1 1483 aa29.74■■■□□ 2.35
UBE3D-207ENST00000509102 CDC42BPBQ9Y5S2 1711 aa29.72■■■□□ 2.35
UBE3D-207ENST00000509102 MYT1LQ9UL68 1186 aa29.68■■■□□ 2.34
UBE3D-207ENST00000509102 YEATS2Q9ULM3 1422 aa29.67■■■□□ 2.34
UBE3D-207ENST00000509102 CDC42BPAQ5VT25 1732 aa29.66■■■□□ 2.34
UBE3D-207ENST00000509102 CCNB3Q8WWL7 1395 aa29.64■■■□□ 2.34
UBE3D-207ENST00000509102 BCORL1Q5H9F3 1711 aa29.64■■■□□ 2.34
UBE3D-207ENST00000509102 EHBP1L1Q8N3D4 1523 aa29.64■■■□□ 2.34
UBE3D-207ENST00000509102 AFAP1Q8N556 730 aa29.63■■■□□ 2.33
UBE3D-207ENST00000509102 ADAMTSL3P82987 1691 aa29.63■■■□□ 2.33
UBE3D-207ENST00000509102 ABCC1P33527 1531 aa29.62■■■□□ 2.33
UBE3D-207ENST00000509102 ZNF777Q9ULD5 760 aaPredicted RBP29.62■■■□□ 2.33
UBE3D-207ENST00000509102 GPATCH8Q9UKJ3 1502 aaKnown RBP29.61■■■□□ 2.33
UBE3D-207ENST00000509102 KDM5CP41229 1560 aa29.61■■■□□ 2.33
UBE3D-207ENST00000509102 VPS8Q8N3P4 1428 aa29.6■■■□□ 2.33
UBE3D-207ENST00000509102 ATP10AO60312 1499 aa29.6■■■□□ 2.33
UBE3D-207ENST00000509102 CFDP1Q9UEE9 299 aaPredicted RBP29.59■■■□□ 2.33
UBE3D-207ENST00000509102 C9orf84Q5VXU9 1444 aa29.58■■■□□ 2.33
UBE3D-207ENST00000509102 HECW2Q9P2P5 1572 aa29.57■■■□□ 2.32
UBE3D-207ENST00000509102 ITSN2Q9NZM3 1697 aa29.56■■■□□ 2.32
UBE3D-207ENST00000509102 PTPRMP28827 1452 aa29.55■■■□□ 2.32
UBE3D-207ENST00000509102 PLEKHH2Q8IVE3 1493 aa29.55■■■□□ 2.32
UBE3D-207ENST00000509102 MADDQ8WXG6 1647 aa29.54■■■□□ 2.32
UBE3D-207ENST00000509102 TRAPPC8Q9Y2L5 1435 aa29.54■■■□□ 2.32
UBE3D-207ENST00000509102 MLH3Q9UHC1 1453 aa29.53■■■□□ 2.32
UBE3D-207ENST00000509102 ARHGEF12Q9NZN5 1544 aa29.52■■■□□ 2.32
UBE3D-207ENST00000509102 SAMD9LQ8IVG5 1584 aa29.51■■■□□ 2.31
UBE3D-207ENST00000509102 MLECQ14165 292 aa29.5■■■□□ 2.31
UBE3D-207ENST00000509102 TIAM1Q13009 1591 aa29.5■■■□□ 2.31
UBE3D-207ENST00000509102 SYCP2Q9BX26 1530 aa29.49■■■□□ 2.31
UBE3D-207ENST00000509102 KIAA1107Q9UPP5 1409 aa29.48■■■□□ 2.31
UBE3D-207ENST00000509102 SUPT6HQ7KZ85 1726 aaKnown RBP29.47■■■□□ 2.31
UBE3D-207ENST00000509102 DIP2CQ9Y2E4 1556 aa29.46■■■□□ 2.31
UBE3D-207ENST00000509102 RIMS1Q86UR5 1692 aaKnown RBP29.45■■■□□ 2.31
UBE3D-207ENST00000509102 HNRNPMP52272 730 aaKnown RBP eCLIP29.45■■■□□ 2.31
UBE3D-207ENST00000509102 SIGLEC1Q9BZZ2 1709 aa29.45■■■□□ 2.3
UBE3D-207ENST00000509102 SPAG9O60271 1321 aaKnown RBP29.44■■■□□ 2.3
UBE3D-207ENST00000509102 REREQ9P2R6 1566 aa29.43■■■□□ 2.3
UBE3D-207ENST00000509102 NCOA2Q15596 1464 aa29.42■■■□□ 2.3
UBE3D-207ENST00000509102 ABCA6Q8N139 1617 aa29.42■■■□□ 2.3
UBE3D-207ENST00000509102 APLP2Q06481 763 aa29.4■■■□□ 2.3
UBE3D-207ENST00000509102 LRRC9Q6ZRR7 1453 aa29.39■■■□□ 2.3
UBE3D-207ENST00000509102 MAP3K1Q13233 1512 aa29.39■■■□□ 2.3
UBE3D-207ENST00000509102 FER1L4A9Z1Z3 1794 aa29.39■■■□□ 2.29
UBE3D-207ENST00000509102 KIDINS220Q9ULH0 1771 aa29.38■■■□□ 2.29
UBE3D-207ENST00000509102 PLPPR3Q6T4P5 718 aa29.35■■■□□ 2.29
UBE3D-207ENST00000509102 AGLP35573 1532 aa29.34■■■□□ 2.29
UBE3D-207ENST00000509102 ESF1Q9H501 851 aaKnown RBP29.33■■■□□ 2.29
UBE3D-207ENST00000509102 ZNF644Q9H582 1327 aaPredicted RBP29.33■■■□□ 2.29
UBE3D-207ENST00000509102 ATP7AQ04656 1500 aa29.33■■■□□ 2.29
UBE3D-207ENST00000509102 SENP3Q9H4L4 574 aaPredicted RBP29.31■■■□□ 2.28
UBE3D-207ENST00000509102 INO80Q9ULG1 1556 aaPredicted RBP29.28■■■□□ 2.28
UBE3D-207ENST00000509102 RSPH4AQ5TD94 716 aa29.27■■■□□ 2.28
UBE3D-207ENST00000509102 CAMSAP2Q08AD1 1489 aa29.27■■■□□ 2.28
UBE3D-207ENST00000509102 MBD5Q9P267 1494 aa29.26■■■□□ 2.27
UBE3D-207ENST00000509102 KANK4Q5T7N3 995 aaPredicted RBP29.25■■■□□ 2.27
UBE3D-207ENST00000509102 CCDC141Q6ZP82 1450 aa29.23■■■□□ 2.27
UBE3D-207ENST00000509102 A2MP01023 1474 aa29.23■■■□□ 2.27
UBE3D-207ENST00000509102 RTEL1-TNFRSF6BF6WH68 1400 aa29.21■■■□□ 2.27
UBE3D-207ENST00000509102 LMTK3Q96Q04 1460 aa29.19■■■□□ 2.26
UBE3D-207ENST00000509102 CNTLNQ9NXG0 1405 aa29.19■■■□□ 2.26
UBE3D-207ENST00000509102 ADGBQ8N7X0 1667 aa29.18■■■□□ 2.26
UBE3D-207ENST00000509102 TSPY4P0CV99 314 aa29.17■■■□□ 2.26
UBE3D-207ENST00000509102 TSPY10P0CW01 314 aa29.17■■■□□ 2.26
UBE3D-207ENST00000509102 MYOM3Q5VTT5 1437 aa29.17■■■□□ 2.26
UBE3D-207ENST00000509102 MIA2Q96PC5 1412 aa29.16■■■□□ 2.26
UBE3D-207ENST00000509102 PLXNC1O60486 1568 aa29.16■■■□□ 2.26
UBE3D-207ENST00000509102 CEBPAP49715 358 aaPredicted RBP29.15■■■□□ 2.26
UBE3D-207ENST00000509102 ARHGEF5Q12774 1597 aa29.14■■■□□ 2.26
UBE3D-207ENST00000509102 GGT6Q6P531 493 aa29.09■■■□□ 2.25
UBE3D-207ENST00000509102 DHX29Q7Z478 1369 aaKnown RBP29.08■■■□□ 2.25
UBE3D-207ENST00000509102 PREX1Q8TCU6 1659 aa29.08■■■□□ 2.25
UBE3D-207ENST00000509102 C3P01024 1663 aa29.06■■■□□ 2.24
UBE3D-207ENST00000509102 PPP6R1Q9UPN7 881 aa29.06■■■□□ 2.24
UBE3D-207ENST00000509102 UHRF1BP1Q6BDS2 1440 aa29.05■■■□□ 2.24
UBE3D-207ENST00000509102 HSPA2P54652 639 aa29.05■■■□□ 2.24
UBE3D-207ENST00000509102 MROH2AA6NES4 1674 aa29.03■■■□□ 2.24
UBE3D-207ENST00000509102 SETD1BQ9UPS6 1966 aaKnown RBP29.02■■■□□ 2.24
UBE3D-207ENST00000509102 ZMYM3Q14202 1370 aa29■■■□□ 2.23
UBE3D-207ENST00000509102 KIF3BO15066 747 aa28.99■■■□□ 2.23
UBE3D-207ENST00000509102 MAST1Q9Y2H9 1570 aa28.98■■■□□ 2.23
UBE3D-207ENST00000509102 CLTCQ00610 1675 aaKnown RBP28.97■■■□□ 2.23
UBE3D-207ENST00000509102 NPATQ14207 1427 aa28.96■■■□□ 2.23
UBE3D-207ENST00000509102 PTPN23Q9H3S7 1636 aa28.96■■■□□ 2.23
UBE3D-207ENST00000509102 FGD6Q6ZV73 1430 aa28.94■■■□□ 2.22
UBE3D-207ENST00000509102 FAM135AQ9P2D6 1515 aa28.9■■■□□ 2.22
UBE3D-207ENST00000509102 SHANK2Q9UPX8 1470 aa28.89■■■□□ 2.22
UBE3D-207ENST00000509102 WASHC2CQ9Y4E1 1318 aa28.88■■■□□ 2.21
UBE3D-207ENST00000509102 TCOF1Q13428 1488 aaKnown RBP28.87■■■□□ 2.21
UBE3D-207ENST00000509102 KDM5DQ9BY66 1539 aa28.87■■■□□ 2.21
UBE3D-207ENST00000509102 DMRT2Q9Y5R5 561 aa28.85■■■□□ 2.21
UBE3D-207ENST00000509102 ABCC5O15440 1437 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms