RNA–Protein interactions for RNA: ENST00000509048.1

RETREG1-204, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-204ENST00000509048 ADAMTSL3P82987 1691 aa37.21■■■■□ 3.55
RETREG1-204ENST00000509048 MAGI2Q86UL8 1455 aa37.21■■■■□ 3.55
RETREG1-204ENST00000509048 ARHGAP5Q13017 1502 aa37.17■■■■□ 3.54
RETREG1-204ENST00000509048 ZFYVE16Q7Z3T8 1539 aa37.17■■■■□ 3.54
RETREG1-204ENST00000509048 BCORL1Q5H9F3 1711 aa37.17■■■■□ 3.54
RETREG1-204ENST00000509048 YEATS2Q9ULM3 1422 aa37.16■■■■□ 3.54
RETREG1-204ENST00000509048 ARID4BQ4LE39 1312 aaPredicted RBP37.13■■■■□ 3.54
RETREG1-204ENST00000509048 CDC42BPBQ9Y5S2 1711 aa37.12■■■■□ 3.53
RETREG1-204ENST00000509048 PREX2Q70Z35 1606 aa37.1■■■■□ 3.53
RETREG1-204ENST00000509048 PTPRMP28827 1452 aa37.08■■■■□ 3.53
RETREG1-204ENST00000509048 HECW2Q9P2P5 1572 aa37.08■■■■□ 3.53
RETREG1-204ENST00000509048 ZNF518AQ6AHZ1 1483 aa37.07■■■■□ 3.53
RETREG1-204ENST00000509048 CEP162Q5TB80 1403 aa37.06■■■■□ 3.52
RETREG1-204ENST00000509048 MADDQ8WXG6 1647 aa37.04■■■■□ 3.52
RETREG1-204ENST00000509048 SIGLEC1Q9BZZ2 1709 aa37.04■■■■□ 3.52
RETREG1-204ENST00000509048 KDM5CP41229 1560 aa37.03■■■■□ 3.52
RETREG1-204ENST00000509048 CDC42BPAQ5VT25 1732 aa37■■■■□ 3.51
RETREG1-204ENST00000509048 AFAP1Q8N556 730 aa36.98■■■■□ 3.51
RETREG1-204ENST00000509048 ATP10AO60312 1499 aa36.98■■■■□ 3.51
RETREG1-204ENST00000509048 ABCC1P33527 1531 aa36.97■■■■□ 3.51
RETREG1-204ENST00000509048 ARHGEF12Q9NZN5 1544 aa36.94■■■■□ 3.5
RETREG1-204ENST00000509048 C9orf84Q5VXU9 1444 aa36.93■■■■□ 3.5
RETREG1-204ENST00000509048 GPATCH8Q9UKJ3 1502 aaKnown RBP36.91■■■■□ 3.5
RETREG1-204ENST00000509048 RIMS1Q86UR5 1692 aaKnown RBP36.9■■■■□ 3.5
RETREG1-204ENST00000509048 ITSN2Q9NZM3 1697 aa36.9■■■■□ 3.5
RETREG1-204ENST00000509048 TRAPPC8Q9Y2L5 1435 aa36.89■■■■□ 3.5
RETREG1-204ENST00000509048 MLH3Q9UHC1 1453 aa36.88■■■■□ 3.5
RETREG1-204ENST00000509048 MTUS2Q5JR59 1369 aa36.88■■■■□ 3.49
RETREG1-204ENST00000509048 DIP2CQ9Y2E4 1556 aa36.84■■■■□ 3.49
RETREG1-204ENST00000509048 SAMD9LQ8IVG5 1584 aa36.83■■■■□ 3.49
RETREG1-204ENST00000509048 LOC105371045A0A1W2PR82 267 aa36.82■■■■□ 3.48
RETREG1-204ENST00000509048 REREQ9P2R6 1566 aa36.81■■■■□ 3.48
RETREG1-204ENST00000509048 MLECQ14165 292 aa36.8■■■■□ 3.48
RETREG1-204ENST00000509048 ABCA6Q8N139 1617 aa36.8■■■■□ 3.48
RETREG1-204ENST00000509048 EHBP1L1Q8N3D4 1523 aa36.8■■■■□ 3.48
RETREG1-204ENST00000509048 CCNB3Q8WWL7 1395 aa36.79■■■■□ 3.48
RETREG1-204ENST00000509048 MYT1LQ9UL68 1186 aa36.78■■■■□ 3.48
RETREG1-204ENST00000509048 FER1L4A9Z1Z3 1794 aa36.77■■■■□ 3.48
RETREG1-204ENST00000509048 ZNF777Q9ULD5 760 aaPredicted RBP36.77■■■■□ 3.48
RETREG1-204ENST00000509048 SYCP2Q9BX26 1530 aa36.75■■■■□ 3.47
RETREG1-204ENST00000509048 CFDP1Q9UEE9 299 aaPredicted RBP36.75■■■■□ 3.47
RETREG1-204ENST00000509048 KIDINS220Q9ULH0 1771 aa36.73■■■■□ 3.47
RETREG1-204ENST00000509048 ILDR1Q86SU0 546 aaPredicted RBP36.73■■■■□ 3.47
RETREG1-204ENST00000509048 KIAA1107Q9UPP5 1409 aa36.73■■■■□ 3.47
RETREG1-204ENST00000509048 TIAM1Q13009 1591 aa36.71■■■■□ 3.47
RETREG1-204ENST00000509048 PLEKHH2Q8IVE3 1493 aa36.71■■■■□ 3.47
RETREG1-204ENST00000509048 LMTK3Q96Q04 1460 aa36.69■■■■□ 3.46
RETREG1-204ENST00000509048 HNRNPMP52272 730 aaKnown RBP eCLIP36.68■■■■□ 3.46
RETREG1-204ENST00000509048 AGLP35573 1532 aa36.68■■■■□ 3.46
RETREG1-204ENST00000509048 VPS8Q8N3P4 1428 aa36.67■■■■□ 3.46
RETREG1-204ENST00000509048 SPAG9O60271 1321 aaKnown RBP36.61■■■■□ 3.45
RETREG1-204ENST00000509048 PLPPR3Q6T4P5 718 aa36.6■■■■□ 3.45
RETREG1-204ENST00000509048 SUPT6HQ7KZ85 1726 aaKnown RBP36.57■■■■□ 3.45
RETREG1-204ENST00000509048 INO80Q9ULG1 1556 aaPredicted RBP36.57■■■■□ 3.44
RETREG1-204ENST00000509048 NCOA2Q15596 1464 aa36.56■■■■□ 3.44
RETREG1-204ENST00000509048 ATP7AQ04656 1500 aa36.56■■■■□ 3.44
RETREG1-204ENST00000509048 ZNF644Q9H582 1327 aaPredicted RBP36.56■■■■□ 3.44
RETREG1-204ENST00000509048 MBD5Q9P267 1494 aa36.53■■■■□ 3.44
RETREG1-204ENST00000509048 CEBPAP49715 358 aaPredicted RBP36.49■■■■□ 3.43
RETREG1-204ENST00000509048 LRRC9Q6ZRR7 1453 aa36.49■■■■□ 3.43
RETREG1-204ENST00000509048 MAP3K1Q13233 1512 aa36.47■■■■□ 3.43
RETREG1-204ENST00000509048 PLXNC1O60486 1568 aa36.46■■■■□ 3.43
RETREG1-204ENST00000509048 A2MP01023 1474 aa36.43■■■■□ 3.42
RETREG1-204ENST00000509048 HSPA2P54652 639 aa36.43■■■■□ 3.42
RETREG1-204ENST00000509048 PREX1Q8TCU6 1659 aa36.42■■■■□ 3.42
RETREG1-204ENST00000509048 CAMSAP2Q08AD1 1489 aa36.41■■■■□ 3.42
RETREG1-204ENST00000509048 CNTLNQ9NXG0 1405 aa36.41■■■■□ 3.42
RETREG1-204ENST00000509048 C3P01024 1663 aa36.4■■■■□ 3.42
RETREG1-204ENST00000509048 ESF1Q9H501 851 aaKnown RBP36.4■■■■□ 3.42
RETREG1-204ENST00000509048 RTEL1-TNFRSF6BF6WH68 1400 aa36.4■■■■□ 3.42
RETREG1-204ENST00000509048 ADGBQ8N7X0 1667 aa36.37■■■■□ 3.41
RETREG1-204ENST00000509048 CCDC141Q6ZP82 1450 aa36.36■■■■□ 3.41
RETREG1-204ENST00000509048 SETD1BQ9UPS6 1966 aaKnown RBP36.35■■■■□ 3.41
RETREG1-204ENST00000509048 KANK4Q5T7N3 995 aaPredicted RBP36.35■■■■□ 3.41
RETREG1-204ENST00000509048 RSPH4AQ5TD94 716 aa36.33■■■■□ 3.41
RETREG1-204ENST00000509048 MROH2AA6NES4 1674 aa36.31■■■■□ 3.4
RETREG1-204ENST00000509048 UHRF1BP1Q6BDS2 1440 aa36.3■■■■□ 3.4
RETREG1-204ENST00000509048 ARHGEF5Q12774 1597 aa36.28■■■■□ 3.4
RETREG1-204ENST00000509048 DHX29Q7Z478 1369 aaKnown RBP36.25■■■■□ 3.39
RETREG1-204ENST00000509048 ZMYM3Q14202 1370 aa36.23■■■■□ 3.39
RETREG1-204ENST00000509048 MYOM3Q5VTT5 1437 aa36.21■■■■□ 3.39
RETREG1-204ENST00000509048 GGT6Q6P531 493 aa36.21■■■■□ 3.39
RETREG1-204ENST00000509048 NPATQ14207 1427 aa36.2■■■■□ 3.39
RETREG1-204ENST00000509048 MIA2Q96PC5 1412 aa36.2■■■■□ 3.39
RETREG1-204ENST00000509048 PPP6R1Q9UPN7 881 aa36.2■■■■□ 3.39
RETREG1-204ENST00000509048 CLTCQ00610 1675 aaKnown RBP36.19■■■■□ 3.38
RETREG1-204ENST00000509048 TSPY4P0CV99 314 aa36.15■■■■□ 3.38
RETREG1-204ENST00000509048 TSPY10P0CW01 314 aa36.15■■■■□ 3.38
RETREG1-204ENST00000509048 APLP2Q06481 763 aa36.12■■■■□ 3.37
RETREG1-204ENST00000509048 STRCQ7RTU9 1775 aa36.12■■■■□ 3.37
RETREG1-204ENST00000509048 MAST1Q9Y2H9 1570 aa36.1■■■■□ 3.37
RETREG1-204ENST00000509048 PTPRKQ15262 1439 aa36.08■■■■□ 3.37
RETREG1-204ENST00000509048 KIF3BO15066 747 aa36.07■■■■□ 3.36
RETREG1-204ENST00000509048 FAM135AQ9P2D6 1515 aa36.03■■■■□ 3.36
RETREG1-204ENST00000509048 DMRT2Q9Y5R5 561 aa36.03■■■■□ 3.36
RETREG1-204ENST00000509048 FBXO41Q8TF61 875 aa36.02■■■■□ 3.36
RETREG1-204ENST00000509048 KDM5DQ9BY66 1539 aa35.99■■■■□ 3.35
RETREG1-204ENST00000509048 MYO3AQ8NEV4 1616 aa35.97■■■■□ 3.35
RETREG1-204ENST00000509048 NCOA1Q15788 1441 aa35.97■■■■□ 3.35
RETREG1-204ENST00000509048 PTPN23Q9H3S7 1636 aa35.96■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms