RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 CDC42BPBQ9Y5S2 1711 aa23.88■■□□□ 1.41
UBE2D3-228ENST00000508974 CEP162Q5TB80 1403 aa23.88■■□□□ 1.41
UBE2D3-228ENST00000508974 PLPPR3Q6T4P5 718 aa23.88■■□□□ 1.41
UBE2D3-228ENST00000508974 SCAPERQ9BY12 1400 aa23.87■■□□□ 1.41
UBE2D3-228ENST00000508974 ZMYM4Q5VZL5 1548 aa23.84■■□□□ 1.41
UBE2D3-228ENST00000508974 PREX2Q70Z35 1606 aa23.84■■□□□ 1.41
UBE2D3-228ENST00000508974 EFCAB2Q5VUJ9 269 aa23.84■■□□□ 1.41
UBE2D3-228ENST00000508974 CDC42BPAQ5VT25 1732 aa23.83■■□□□ 1.41
UBE2D3-228ENST00000508974 ZFYVE16Q7Z3T8 1539 aa23.83■■□□□ 1.41
UBE2D3-228ENST00000508974 POGZQ7Z3K3 1410 aa23.83■■□□□ 1.4
UBE2D3-228ENST00000508974 ARID4BQ4LE39 1312 aaPredicted RBP23.83■■□□□ 1.4
UBE2D3-228ENST00000508974 LOC105371045A0A1W2PR82 267 aa23.82■■□□□ 1.4
UBE2D3-228ENST00000508974 YEATS2Q9ULM3 1422 aa23.81■■□□□ 1.4
UBE2D3-228ENST00000508974 BCORL1Q5H9F3 1711 aa23.81■■□□□ 1.4
UBE2D3-228ENST00000508974 SIGLEC1Q9BZZ2 1709 aa23.79■■□□□ 1.4
UBE2D3-228ENST00000508974 ADAMTSL3P82987 1691 aa23.79■■□□□ 1.4
UBE2D3-228ENST00000508974 MADDQ8WXG6 1647 aa23.76■■□□□ 1.39
UBE2D3-228ENST00000508974 ITSN2Q9NZM3 1697 aa23.74■■□□□ 1.39
UBE2D3-228ENST00000508974 MAGI2Q86UL8 1455 aa23.74■■□□□ 1.39
UBE2D3-228ENST00000508974 ZNF518AQ6AHZ1 1483 aa23.73■■□□□ 1.39
UBE2D3-228ENST00000508974 ABCC1P33527 1531 aa23.72■■□□□ 1.39
UBE2D3-228ENST00000508974 RIMS1Q86UR5 1692 aaKnown RBP23.71■■□□□ 1.39
UBE2D3-228ENST00000508974 MTUS2Q5JR59 1369 aa23.71■■□□□ 1.39
UBE2D3-228ENST00000508974 HECW2Q9P2P5 1572 aa23.7■■□□□ 1.38
UBE2D3-228ENST00000508974 AFAP1Q8N556 730 aa23.7■■□□□ 1.38
UBE2D3-228ENST00000508974 MYT1LQ9UL68 1186 aa23.7■■□□□ 1.38
UBE2D3-228ENST00000508974 KDM5CP41229 1560 aa23.69■■□□□ 1.38
UBE2D3-228ENST00000508974 ZNF777Q9ULD5 760 aaPredicted RBP23.69■■□□□ 1.38
UBE2D3-228ENST00000508974 ARHGEF12Q9NZN5 1544 aa23.69■■□□□ 1.38
UBE2D3-228ENST00000508974 PTPRMP28827 1452 aa23.68■■□□□ 1.38
UBE2D3-228ENST00000508974 SAMD9LQ8IVG5 1584 aa23.68■■□□□ 1.38
UBE2D3-228ENST00000508974 GPATCH8Q9UKJ3 1502 aaKnown RBP23.67■■□□□ 1.38
UBE2D3-228ENST00000508974 EHBP1L1Q8N3D4 1523 aa23.66■■□□□ 1.38
UBE2D3-228ENST00000508974 MLECQ14165 292 aa23.66■■□□□ 1.38
UBE2D3-228ENST00000508974 TRAPPC8Q9Y2L5 1435 aa23.66■■□□□ 1.38
UBE2D3-228ENST00000508974 ATP10AO60312 1499 aa23.65■■□□□ 1.38
UBE2D3-228ENST00000508974 ABCA6Q8N139 1617 aa23.64■■□□□ 1.38
UBE2D3-228ENST00000508974 CCNB3Q8WWL7 1395 aa23.64■■□□□ 1.37
UBE2D3-228ENST00000508974 SYCP2Q9BX26 1530 aa23.64■■□□□ 1.37
UBE2D3-228ENST00000508974 FER1L4A9Z1Z3 1794 aa23.63■■□□□ 1.37
UBE2D3-228ENST00000508974 C9orf84Q5VXU9 1444 aa23.63■■□□□ 1.37
UBE2D3-228ENST00000508974 DIP2CQ9Y2E4 1556 aa23.63■■□□□ 1.37
UBE2D3-228ENST00000508974 TIAM1Q13009 1591 aa23.61■■□□□ 1.37
UBE2D3-228ENST00000508974 VPS8Q8N3P4 1428 aa23.59■■□□□ 1.37
UBE2D3-228ENST00000508974 KIDINS220Q9ULH0 1771 aa23.58■■□□□ 1.37
UBE2D3-228ENST00000508974 CFDP1Q9UEE9 299 aaPredicted RBP23.58■■□□□ 1.37
UBE2D3-228ENST00000508974 MLH3Q9UHC1 1453 aa23.57■■□□□ 1.36
UBE2D3-228ENST00000508974 SUPT6HQ7KZ85 1726 aaKnown RBP23.57■■□□□ 1.36
UBE2D3-228ENST00000508974 HNRNPMP52272 730 aaKnown RBP eCLIP23.56■■□□□ 1.364e-13■■■■■ 32.7
UBE2D3-228ENST00000508974 NCOA2Q15596 1464 aa23.51■■□□□ 1.35
UBE2D3-228ENST00000508974 REREQ9P2R6 1566 aa23.51■■□□□ 1.35
UBE2D3-228ENST00000508974 PLEKHH2Q8IVE3 1493 aa23.5■■□□□ 1.35
UBE2D3-228ENST00000508974 ZNF644Q9H582 1327 aaPredicted RBP23.5■■□□□ 1.35
UBE2D3-228ENST00000508974 SPAG9O60271 1321 aaKnown RBP23.48■■□□□ 1.35
UBE2D3-228ENST00000508974 ATP7AQ04656 1500 aa23.48■■□□□ 1.35
UBE2D3-228ENST00000508974 INO80Q9ULG1 1556 aaPredicted RBP23.48■■□□□ 1.35
UBE2D3-228ENST00000508974 KIAA1107Q9UPP5 1409 aa23.47■■□□□ 1.35
UBE2D3-228ENST00000508974 LRRC9Q6ZRR7 1453 aa23.46■■□□□ 1.35
UBE2D3-228ENST00000508974 LMTK3Q96Q04 1460 aa23.43■■□□□ 1.34
UBE2D3-228ENST00000508974 AGLP35573 1532 aa23.42■■□□□ 1.34
UBE2D3-228ENST00000508974 CAMSAP2Q08AD1 1489 aa23.42■■□□□ 1.34
UBE2D3-228ENST00000508974 CEBPAP49715 358 aaPredicted RBP23.4■■□□□ 1.34
UBE2D3-228ENST00000508974 KANK4Q5T7N3 995 aaPredicted RBP23.4■■□□□ 1.34
UBE2D3-228ENST00000508974 MBD5Q9P267 1494 aa23.39■■□□□ 1.34
UBE2D3-228ENST00000508974 ADGBQ8N7X0 1667 aa23.38■■□□□ 1.33
UBE2D3-228ENST00000508974 C3P01024 1663 aa23.37■■□□□ 1.33
UBE2D3-228ENST00000508974 MAP3K1Q13233 1512 aa23.37■■□□□ 1.33
UBE2D3-228ENST00000508974 ESF1Q9H501 851 aaKnown RBP23.35■■□□□ 1.33
UBE2D3-228ENST00000508974 A2MP01023 1474 aa23.35■■□□□ 1.33
UBE2D3-228ENST00000508974 PLXNC1O60486 1568 aa23.35■■□□□ 1.33
UBE2D3-228ENST00000508974 PREX1Q8TCU6 1659 aa23.35■■□□□ 1.33
UBE2D3-228ENST00000508974 HSPA2P54652 639 aa23.34■■□□□ 1.33
UBE2D3-228ENST00000508974 CCDC141Q6ZP82 1450 aa23.33■■□□□ 1.33
UBE2D3-228ENST00000508974 APLP2Q06481 763 aa23.31■■□□□ 1.32
UBE2D3-228ENST00000508974 CLTCQ00610 1675 aaKnown RBP23.3■■□□□ 1.32
UBE2D3-228ENST00000508974 ARHGEF5Q12774 1597 aa23.28■■□□□ 1.32
UBE2D3-228ENST00000508974 RTEL1-TNFRSF6BF6WH68 1400 aa23.26■■□□□ 1.31
UBE2D3-228ENST00000508974 MYOM3Q5VTT5 1437 aa23.26■■□□□ 1.31
UBE2D3-228ENST00000508974 MROH2AA6NES4 1674 aa23.25■■□□□ 1.31
UBE2D3-228ENST00000508974 GGT6Q6P531 493 aa23.25■■□□□ 1.31
UBE2D3-228ENST00000508974 CNTLNQ9NXG0 1405 aa23.24■■□□□ 1.31
UBE2D3-228ENST00000508974 PPP6R1Q9UPN7 881 aa23.23■■□□□ 1.31
UBE2D3-228ENST00000508974 UHRF1BP1Q6BDS2 1440 aa23.21■■□□□ 1.31
UBE2D3-228ENST00000508974 SETD1BQ9UPS6 1966 aaKnown RBP23.2■■□□□ 1.3
UBE2D3-228ENST00000508974 RSPH4AQ5TD94 716 aa23.2■■□□□ 1.3
UBE2D3-228ENST00000508974 MIA2Q96PC5 1412 aa23.19■■□□□ 1.3
UBE2D3-228ENST00000508974 DHX29Q7Z478 1369 aaKnown RBP23.19■■□□□ 1.3
UBE2D3-228ENST00000508974 TSPY4P0CV99 314 aa23.19■■□□□ 1.3
UBE2D3-228ENST00000508974 TSPY10P0CW01 314 aa23.19■■□□□ 1.3
UBE2D3-228ENST00000508974 ADRA2BP18089 450 aa23.19■■□□□ 1.3
UBE2D3-228ENST00000508974 PTPN23Q9H3S7 1636 aa23.18■■□□□ 1.3
UBE2D3-228ENST00000508974 ZMYM3Q14202 1370 aa23.16■■□□□ 1.3
UBE2D3-228ENST00000508974 MAST1Q9Y2H9 1570 aa23.16■■□□□ 1.3
UBE2D3-228ENST00000508974 KIF3BO15066 747 aa23.15■■□□□ 1.3
UBE2D3-228ENST00000508974 CROCC2H7BZ55 1655 aa23.15■■□□□ 1.3
UBE2D3-228ENST00000508974 STRCQ7RTU9 1775 aa23.12■■□□□ 1.29
UBE2D3-228ENST00000508974 ILDR1Q86SU0 546 aaPredicted RBP23.12■■□□□ 1.29
UBE2D3-228ENST00000508974 FGD6Q6ZV73 1430 aa23.1■■□□□ 1.29
UBE2D3-228ENST00000508974 MYO3AQ8NEV4 1616 aa23.1■■□□□ 1.29
UBE2D3-228ENST00000508974 NPATQ14207 1427 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms