RNA–Protein interactions for RNA: ENST00000508961.1

ARHGEF38-206, Transcript of Rho guanine nucleotide exchange factor 38, humanhuman

TSL 3

Gene ARHGEF38, Length 452 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38-206ENST00000508961 FBXO22Q8NEZ5 403 aa13.54□□□□□ -0.24
ARHGEF38-206ENST00000508961 MFRPQ9BY79 579 aa13.52□□□□□ -0.25
ARHGEF38-206ENST00000508961 HOXB1P14653 301 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF38-206ENST00000508961 SPNS2Q8IVW8 549 aa13.49□□□□□ -0.25
ARHGEF38-206ENST00000508961 RIMBP2O15034 1052 aa13.45□□□□□ -0.26
ARHGEF38-206ENST00000508961 ERBB3P21860 1342 aa13.43□□□□□ -0.26
ARHGEF38-206ENST00000508961 KRTAP3-3Q9BYR6 98 aa13.43□□□□□ -0.26
ARHGEF38-206ENST00000508961 KRTAP3-2Q9BYR7 98 aa13.43□□□□□ -0.26
ARHGEF38-206ENST00000508961 MMRN1Q13201 1228 aa13.42□□□□□ -0.26
ARHGEF38-206ENST00000508961 VARS2Q5ST30 1063 aaKnown RBP13.36□□□□□ -0.27
ARHGEF38-206ENST00000508961 GPR153Q6NV75 609 aa13.36□□□□□ -0.27
ARHGEF38-206ENST00000508961 ARSIQ5FYB1 569 aa13.35□□□□□ -0.27
ARHGEF38-206ENST00000508961 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
ARHGEF38-206ENST00000508961 C2orf72A6NCS6 295 aa13.33□□□□□ -0.28
ARHGEF38-206ENST00000508961 PPP1R37O75864 691 aa13.33□□□□□ -0.28
ARHGEF38-206ENST00000508961 KHSRPQ92945 711 aaKnown RBP eCLIP13.33□□□□□ -0.28
ARHGEF38-206ENST00000508961 KIF3CO14782 793 aa13.3□□□□□ -0.28
ARHGEF38-206ENST00000508961 CHGAP10645 457 aaKnown RBP13.25□□□□□ -0.29
ARHGEF38-206ENST00000508961 TMC2Q8TDI7 906 aa13.24□□□□□ -0.29
ARHGEF38-206ENST00000508961 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
ARHGEF38-206ENST00000508961 ZNF687Q8N1G0 1237 aa13.22□□□□□ -0.29
ARHGEF38-206ENST00000508961 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF38-206ENST00000508961 NUDT7P0C024 238 aa13.19□□□□□ -0.3
ARHGEF38-206ENST00000508961 PCDHGA4Q9Y5G9 962 aa13.15□□□□□ -0.3
ARHGEF38-206ENST00000508961 SLC34A2O95436 690 aa13.12□□□□□ -0.31
ARHGEF38-206ENST00000508961 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF38-206ENST00000508961 LHX6Q9UPM6 363 aa13.11□□□□□ -0.31
ARHGEF38-206ENST00000508961 ANKRD13DQ6ZTN6 518 aa13.1□□□□□ -0.31
ARHGEF38-206ENST00000508961 PLPP6Q8IY26 295 aa13.07□□□□□ -0.32
ARHGEF38-206ENST00000508961 RNF166Q96A37 237 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF38-206ENST00000508961 GPHNQ9NQX3 736 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF38-206ENST00000508961 MYT1LQ9UL68 1186 aa13.05□□□□□ -0.32
ARHGEF38-206ENST00000508961 FOXK1P85037 733 aa13.04□□□□□ -0.32
ARHGEF38-206ENST00000508961 DSG2Q14126 1118 aa13.04□□□□□ -0.32
ARHGEF38-206ENST00000508961 AXIN2Q9Y2T1 843 aa13.04□□□□□ -0.32
ARHGEF38-206ENST00000508961 DNAJC5Q9H3Z4 198 aa13.01□□□□□ -0.33
ARHGEF38-206ENST00000508961 LSM11P83369 360 aaKnown RBP eCLIP13□□□□□ -0.33
ARHGEF38-206ENST00000508961 POTEEQ6S8J3 1075 aa13□□□□□ -0.33
ARHGEF38-206ENST00000508961 PTCD2Q8WV60 388 aaKnown RBP13□□□□□ -0.33
ARHGEF38-206ENST00000508961 DCAF8L2P0C7V8 631 aa12.98□□□□□ -0.33
ARHGEF38-206ENST00000508961 RYDENQ9NUL5 291 aaKnown RBP12.96□□□□□ -0.33
ARHGEF38-206ENST00000508961 KDM4FA0A1W2PPD8 638 aa12.95□□□□□ -0.34
ARHGEF38-206ENST00000508961 PBX2P40425 430 aa12.94□□□□□ -0.34
ARHGEF38-206ENST00000508961 TBC1D12O60347 775 aa12.93□□□□□ -0.34
ARHGEF38-206ENST00000508961 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF38-206ENST00000508961 PTGER2P43116 358 aa12.91□□□□□ -0.34
ARHGEF38-206ENST00000508961 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.34
ARHGEF38-206ENST00000508961 PSDA5PKW4 1024 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF38-206ENST00000508961 ARHGAP33O14559 1287 aa12.89□□□□□ -0.35
ARHGEF38-206ENST00000508961 CRISPLD2Q9H0B8 497 aa12.89□□□□□ -0.35
ARHGEF38-206ENST00000508961 PSEN2P49810 448 aa12.87□□□□□ -0.35
ARHGEF38-206ENST00000508961 NCKAP5LQ9HCH0 1330 aa12.87□□□□□ -0.35
ARHGEF38-206ENST00000508961 PPP1R15BQ5SWA1 713 aa12.86□□□□□ -0.35
ARHGEF38-206ENST00000508961 PDE4AP27815 886 aa12.85□□□□□ -0.35
ARHGEF38-206ENST00000508961 OXER1Q8TDS5 423 aa12.85□□□□□ -0.35
ARHGEF38-206ENST00000508961 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
ARHGEF38-206ENST00000508961 DMRTA1Q5VZB9 504 aa12.84□□□□□ -0.35
ARHGEF38-206ENST00000508961 ADGRD1Q6QNK2 874 aa12.83□□□□□ -0.36
ARHGEF38-206ENST00000508961 LARP6Q9BRS8 491 aaKnown RBP12.82□□□□□ -0.36
ARHGEF38-206ENST00000508961 ZNF454Q8N9F8 522 aa12.77□□□□□ -0.37
ARHGEF38-206ENST00000508961 KCNK17Q96T54 332 aa12.76□□□□□ -0.37
ARHGEF38-206ENST00000508961 DDX27Q96GQ7 796 aaKnown RBP12.75□□□□□ -0.37
ARHGEF38-206ENST00000508961 TK2O00142 265 aa12.73□□□□□ -0.37
ARHGEF38-206ENST00000508961 HRO43593 1189 aa12.71□□□□□ -0.37
ARHGEF38-206ENST00000508961 EVI5O60447 810 aa12.71□□□□□ -0.37
ARHGEF38-206ENST00000508961 CADPS2Q86UW7 1296 aa12.71□□□□□ -0.37
ARHGEF38-206ENST00000508961 STAC3Q96MF2 364 aa12.7□□□□□ -0.38
ARHGEF38-206ENST00000508961 MAP3K9P80192 1104 aa12.69□□□□□ -0.38
ARHGEF38-206ENST00000508961 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
ARHGEF38-206ENST00000508961 FOSBP53539 338 aa12.68□□□□□ -0.38
ARHGEF38-206ENST00000508961 ANO8Q9HCE9 1232 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF38-206ENST00000508961 MFSD10Q14728 455 aa12.67□□□□□ -0.38
ARHGEF38-206ENST00000508961 HCSTQ9UBK5 93 aa12.67□□□□□ -0.38
ARHGEF38-206ENST00000508961 KCTD12Q96CX2 325 aaKnown RBP12.65□□□□□ -0.38
ARHGEF38-206ENST00000508961 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
ARHGEF38-206ENST00000508961 EMILIN3Q9NT22 766 aa12.65□□□□□ -0.38
ARHGEF38-206ENST00000508961 VPS9D1Q9Y2B5 631 aa12.65□□□□□ -0.38
ARHGEF38-206ENST00000508961 PTPREP23469 700 aa12.62□□□□□ -0.39
ARHGEF38-206ENST00000508961 JPH4Q96JJ6 628 aa12.62□□□□□ -0.39
ARHGEF38-206ENST00000508961 ADAM33Q9BZ11 813 aa12.61□□□□□ -0.39
ARHGEF38-206ENST00000508961 ZDHHC16Q969W1 377 aa12.6□□□□□ -0.39
ARHGEF38-206ENST00000508961 PLA2G2EQ9NZK7 142 aa12.6□□□□□ -0.39
ARHGEF38-206ENST00000508961 BBXQ8WY36 941 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF38-206ENST00000508961 ZBED2Q9BTP6 218 aa12.56□□□□□ -0.4
ARHGEF38-206ENST00000508961 SLC4A5Q9BY07 1137 aa12.55□□□□□ -0.4
ARHGEF38-206ENST00000508961 PCDHGA10Q9Y5H3 936 aa12.55□□□□□ -0.4
ARHGEF38-206ENST00000508961 PTPN5P54829 565 aa12.54□□□□□ -0.4
ARHGEF38-206ENST00000508961 BHMG1C9JSJ3 638 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF38-206ENST00000508961 GOLGA8CPA6NN73 597 aa12.5□□□□□ -0.41
ARHGEF38-206ENST00000508961 DPYSL4O14531 572 aa12.5□□□□□ -0.41
ARHGEF38-206ENST00000508961 MRPL50Q8N5N7 158 aaKnown RBP12.49□□□□□ -0.41
ARHGEF38-206ENST00000508961 COL9A1P20849 921 aa12.47□□□□□ -0.41
ARHGEF38-206ENST00000508961 CAMK2BQ13554 666 aa12.47□□□□□ -0.41
ARHGEF38-206ENST00000508961 TYW1BQ6NUM6 668 aa12.47□□□□□ -0.41
ARHGEF38-206ENST00000508961 PHF14O94880 888 aa12.46□□□□□ -0.41
ARHGEF38-206ENST00000508961 PROX2Q3B8N5 592 aa12.46□□□□□ -0.41
ARHGEF38-206ENST00000508961 SPRYD3Q8NCJ5 442 aa12.46□□□□□ -0.41
ARHGEF38-206ENST00000508961 WNT2BQ93097 391 aa12.46□□□□□ -0.41
ARHGEF38-206ENST00000508961 PPP1R3GB7ZBB8 358 aa12.43□□□□□ -0.42
ARHGEF38-206ENST00000508961 THSD4Q6ZMP0 1018 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms