RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 MTUS2Q5JR59 1369 aa38.8■■■■□ 3.8
PROM1-209ENST00000508940 POGZQ7Z3K3 1410 aa38.73■■■■□ 3.79
PROM1-209ENST00000508940 CDC42BPBQ9Y5S2 1711 aa38.73■■■■□ 3.79
PROM1-209ENST00000508940 PREX2Q70Z35 1606 aa38.71■■■■□ 3.79
PROM1-209ENST00000508940 ARID4BQ4LE39 1312 aaPredicted RBP38.71■■■■□ 3.79
PROM1-209ENST00000508940 ZMYM4Q5VZL5 1548 aa38.71■■■■□ 3.79
PROM1-209ENST00000508940 MAGI2Q86UL8 1455 aa38.68■■■■□ 3.78
PROM1-209ENST00000508940 ARHGEF40Q8TER5 1519 aa38.67■■■■□ 3.78
PROM1-209ENST00000508940 VPS8Q8N3P4 1428 aa38.66■■■■□ 3.78
PROM1-209ENST00000508940 CDC42BPAQ5VT25 1732 aa38.66■■■■□ 3.78
PROM1-209ENST00000508940 ZFYVE16Q7Z3T8 1539 aa38.65■■■■□ 3.78
PROM1-209ENST00000508940 ZNF777Q9ULD5 760 aaPredicted RBP38.64■■■■□ 3.78
PROM1-209ENST00000508940 CCNB3Q8WWL7 1395 aa38.64■■■■□ 3.78
PROM1-209ENST00000508940 ZNF518AQ6AHZ1 1483 aa38.63■■■■□ 3.77
PROM1-209ENST00000508940 MYT1LQ9UL68 1186 aa38.63■■■■□ 3.77
PROM1-209ENST00000508940 AFAP1Q8N556 730 aa38.62■■■■□ 3.77
PROM1-209ENST00000508940 YEATS2Q9ULM3 1422 aa38.62■■■■□ 3.77
PROM1-209ENST00000508940 EHBP1L1Q8N3D4 1523 aa38.61■■■■□ 3.77
PROM1-209ENST00000508940 GPATCH8Q9UKJ3 1502 aaKnown RBP38.61■■■■□ 3.77
PROM1-209ENST00000508940 CFDP1Q9UEE9 299 aaPredicted RBP38.58■■■■□ 3.77
PROM1-209ENST00000508940 ABCC1P33527 1531 aa38.54■■■■□ 3.76
PROM1-209ENST00000508940 KDM5CP41229 1560 aa38.49■■■■□ 3.75
PROM1-209ENST00000508940 TIAM1Q13009 1591 aa38.49■■■■□ 3.75
PROM1-209ENST00000508940 ARHGEF12Q9NZN5 1544 aa38.49■■■■□ 3.75
PROM1-209ENST00000508940 ATP10AO60312 1499 aa38.49■■■■□ 3.75
PROM1-209ENST00000508940 TRAPPC8Q9Y2L5 1435 aa38.49■■■■□ 3.75
PROM1-209ENST00000508940 BCORL1Q5H9F3 1711 aa38.48■■■■□ 3.75
PROM1-209ENST00000508940 ITSN2Q9NZM3 1697 aa38.48■■■■□ 3.75
PROM1-209ENST00000508940 ADAMTSL3P82987 1691 aa38.46■■■■□ 3.75
PROM1-209ENST00000508940 SAMD9LQ8IVG5 1584 aa38.45■■■■□ 3.75
PROM1-209ENST00000508940 C9orf84Q5VXU9 1444 aa38.44■■■■□ 3.74
PROM1-209ENST00000508940 HECW2Q9P2P5 1572 aa38.44■■■■□ 3.74
PROM1-209ENST00000508940 HNRNPMP52272 730 aaKnown RBP eCLIP38.43■■■■□ 3.74
PROM1-209ENST00000508940 PLEKHH2Q8IVE3 1493 aa38.42■■■■□ 3.74
PROM1-209ENST00000508940 MLH3Q9UHC1 1453 aa38.41■■■■□ 3.74
PROM1-209ENST00000508940 SUPT6HQ7KZ85 1726 aaKnown RBP38.41■■■■□ 3.74
PROM1-209ENST00000508940 APLP2Q06481 763 aa38.39■■■■□ 3.74
PROM1-209ENST00000508940 MLECQ14165 292 aa38.39■■■■□ 3.74
PROM1-209ENST00000508940 KIAA1107Q9UPP5 1409 aa38.38■■■■□ 3.74
PROM1-209ENST00000508940 SYCP2Q9BX26 1530 aa38.38■■■■□ 3.74
PROM1-209ENST00000508940 NCOA2Q15596 1464 aa38.38■■■■□ 3.73
PROM1-209ENST00000508940 LRRC9Q6ZRR7 1453 aa38.36■■■■□ 3.73
PROM1-209ENST00000508940 MAP3K1Q13233 1512 aa38.36■■■■□ 3.73
PROM1-209ENST00000508940 PTPRMP28827 1452 aa38.34■■■■□ 3.73
PROM1-209ENST00000508940 MADDQ8WXG6 1647 aa38.34■■■■□ 3.73
PROM1-209ENST00000508940 SIGLEC1Q9BZZ2 1709 aa38.33■■■■□ 3.73
PROM1-209ENST00000508940 SPAG9O60271 1321 aaKnown RBP38.33■■■■□ 3.73
PROM1-209ENST00000508940 ZNF644Q9H582 1327 aaPredicted RBP38.32■■■■□ 3.72
PROM1-209ENST00000508940 DIP2CQ9Y2E4 1556 aa38.31■■■■□ 3.72
PROM1-209ENST00000508940 KANK4Q5T7N3 995 aaPredicted RBP38.29■■■■□ 3.72
PROM1-209ENST00000508940 ABCA6Q8N139 1617 aa38.27■■■■□ 3.72
PROM1-209ENST00000508940 KIDINS220Q9ULH0 1771 aa38.25■■■■□ 3.71
PROM1-209ENST00000508940 RIMS1Q86UR5 1692 aaKnown RBP38.24■■■■□ 3.71
PROM1-209ENST00000508940 REREQ9P2R6 1566 aa38.22■■■■□ 3.71
PROM1-209ENST00000508940 PLPPR3Q6T4P5 718 aa38.18■■■■□ 3.7
PROM1-209ENST00000508940 ATP7AQ04656 1500 aa38.16■■■■□ 3.7
PROM1-209ENST00000508940 MBD5Q9P267 1494 aa38.15■■■■□ 3.7
PROM1-209ENST00000508940 FER1L4A9Z1Z3 1794 aa38.15■■■■□ 3.7
PROM1-209ENST00000508940 RSPH4AQ5TD94 716 aa38.14■■■■□ 3.7
PROM1-209ENST00000508940 CAMSAP2Q08AD1 1489 aa38.14■■■■□ 3.7
PROM1-209ENST00000508940 AGLP35573 1532 aa38.12■■■■□ 3.69
PROM1-209ENST00000508940 INO80Q9ULG1 1556 aaPredicted RBP38.1■■■■□ 3.69
PROM1-209ENST00000508940 ESF1Q9H501 851 aaKnown RBP38.09■■■■□ 3.69
PROM1-209ENST00000508940 MYOM3Q5VTT5 1437 aa38.05■■■■□ 3.68
PROM1-209ENST00000508940 CCDC141Q6ZP82 1450 aa38.05■■■■□ 3.68
PROM1-209ENST00000508940 RTEL1-TNFRSF6BF6WH68 1400 aa38.04■■■■□ 3.68
PROM1-209ENST00000508940 A2MP01023 1474 aa38.03■■■■□ 3.68
PROM1-209ENST00000508940 TSPY4P0CV99 314 aa38.02■■■■□ 3.68
PROM1-209ENST00000508940 TSPY10P0CW01 314 aa38.02■■■■□ 3.68
PROM1-209ENST00000508940 MIA2Q96PC5 1412 aa38.02■■■■□ 3.68
PROM1-209ENST00000508940 ARHGEF5Q12774 1597 aa37.97■■■■□ 3.67
PROM1-209ENST00000508940 CEBPAP49715 358 aaPredicted RBP37.96■■■■□ 3.67
PROM1-209ENST00000508940 ADGBQ8N7X0 1667 aa37.95■■■■□ 3.67
PROM1-209ENST00000508940 PLXNC1O60486 1568 aa37.91■■■■□ 3.66
PROM1-209ENST00000508940 GGT6Q6P531 493 aa37.89■■■■□ 3.66
PROM1-209ENST00000508940 CNTLNQ9NXG0 1405 aa37.88■■■■□ 3.66
PROM1-209ENST00000508940 DHX29Q7Z478 1369 aaKnown RBP37.88■■■■□ 3.65
PROM1-209ENST00000508940 LMTK3Q96Q04 1460 aa37.84■■■■□ 3.65
PROM1-209ENST00000508940 PPP6R1Q9UPN7 881 aa37.8■■■■□ 3.64
PROM1-209ENST00000508940 PTPN23Q9H3S7 1636 aa37.79■■■■□ 3.64
PROM1-209ENST00000508940 KIF3BO15066 747 aa37.79■■■■□ 3.64
PROM1-209ENST00000508940 FGD6Q6ZV73 1430 aa37.78■■■■□ 3.64
PROM1-209ENST00000508940 C3P01024 1663 aa37.77■■■■□ 3.64
PROM1-209ENST00000508940 HSPA2P54652 639 aa37.75■■■■□ 3.63
PROM1-209ENST00000508940 MAST1Q9Y2H9 1570 aa37.75■■■■□ 3.63
PROM1-209ENST00000508940 SETD1BQ9UPS6 1966 aaKnown RBP37.74■■■■□ 3.63
PROM1-209ENST00000508940 ZMYM3Q14202 1370 aa37.73■■■■□ 3.63
PROM1-209ENST00000508940 MROH2AA6NES4 1674 aa37.7■■■■□ 3.63
PROM1-209ENST00000508940 PREX1Q8TCU6 1659 aa37.7■■■■□ 3.63
PROM1-209ENST00000508940 TCOF1Q13428 1488 aaKnown RBP37.69■■■■□ 3.62
PROM1-209ENST00000508940 CLTCQ00610 1675 aaKnown RBP37.69■■■■□ 3.62
PROM1-209ENST00000508940 UHRF1BP1Q6BDS2 1440 aa37.68■■■■□ 3.62
PROM1-209ENST00000508940 ABCC5O15440 1437 aa37.67■■■■□ 3.62
PROM1-209ENST00000508940 FAM50AQ14320 339 aaKnown RBP37.63■■■■□ 3.61
PROM1-209ENST00000508940 DAPK1P53355 1430 aa37.62■■■■□ 3.61
PROM1-209ENST00000508940 SHANK2Q9UPX8 1470 aa37.61■■■■□ 3.61
PROM1-209ENST00000508940 NPATQ14207 1427 aa37.6■■■■□ 3.61
PROM1-209ENST00000508940 DNMT1P26358 1616 aaKnown RBP37.59■■■■□ 3.61
PROM1-209ENST00000508940 WASHC2CQ9Y4E1 1318 aa37.59■■■■□ 3.61
PROM1-209ENST00000508940 CROCC2H7BZ55 1655 aa37.58■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms