RNA–Protein interactions for RNA: ENST00000508869.5

TMCC1-208, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

TSL 3

Gene TMCC1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-208ENST00000508869 LCE2DQ5TA82 110 aaPredicted RBP10.53□□□□□ -0.72
TMCC1-208ENST00000508869 SPRYD3Q8NCJ5 442 aa10.52□□□□□ -0.73
TMCC1-208ENST00000508869 KIF3CO14782 793 aa10.51□□□□□ -0.73
TMCC1-208ENST00000508869 CADPS2Q86UW7 1296 aa10.5□□□□□ -0.73
TMCC1-208ENST00000508869 HOXB3P14651 431 aaPredicted RBP10.49□□□□□ -0.73
TMCC1-208ENST00000508869 ST18O60284 1047 aa10.47□□□□□ -0.73
TMCC1-208ENST00000508869 TMC2Q8TDI7 906 aa10.46□□□□□ -0.73
TMCC1-208ENST00000508869 NCKAP5LQ9HCH0 1330 aa10.45□□□□□ -0.74
TMCC1-208ENST00000508869 SNPHO15079 494 aa10.43□□□□□ -0.74
TMCC1-208ENST00000508869 GPHNQ9NQX3 736 aaPredicted RBP10.43□□□□□ -0.74
TMCC1-208ENST00000508869 DSG2Q14126 1118 aa10.42□□□□□ -0.74
TMCC1-208ENST00000508869 CRISPLD2Q9H0B8 497 aa10.42□□□□□ -0.74
TMCC1-208ENST00000508869 FOXK1P85037 733 aa10.39□□□□□ -0.75
TMCC1-208ENST00000508869 PLPP6Q8IY26 295 aa10.39□□□□□ -0.75
TMCC1-208ENST00000508869 LARP6Q9BRS8 491 aaKnown RBP10.39□□□□□ -0.75
TMCC1-208ENST00000508869 DOK7Q18PE1 504 aa10.38□□□□□ -0.75
TMCC1-208ENST00000508869 MARVELD3Q96A59 401 aa10.38□□□□□ -0.75
TMCC1-208ENST00000508869 PDE4AP27815 886 aa10.37□□□□□ -0.75
TMCC1-208ENST00000508869 ZNF710Q8N1W2 664 aa10.37□□□□□ -0.75
TMCC1-208ENST00000508869 TSHZ2Q9NRE2 1034 aa10.37□□□□□ -0.75
TMCC1-208ENST00000508869 KHSRPQ92945 711 aaKnown RBP eCLIP10.36□□□□□ -0.75
TMCC1-208ENST00000508869 POTEMA6NI47 508 aa10.35□□□□□ -0.75
TMCC1-208ENST00000508869 POTEGQ6S5H5 508 aa10.35□□□□□ -0.75
TMCC1-208ENST00000508869 ARSIQ5FYB1 569 aa10.34□□□□□ -0.75
TMCC1-208ENST00000508869 PPP1R15BQ5SWA1 713 aa10.34□□□□□ -0.75
TMCC1-208ENST00000508869 GPR153Q6NV75 609 aa10.33□□□□□ -0.76
TMCC1-208ENST00000508869 PLCB2Q00722 1185 aa10.32□□□□□ -0.76
TMCC1-208ENST00000508869 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
TMCC1-208ENST00000508869 HOXB1P14653 301 aaPredicted RBP10.31□□□□□ -0.76
TMCC1-208ENST00000508869 MFSD10Q14728 455 aa10.31□□□□□ -0.76
TMCC1-208ENST00000508869 POTEB3A0JP26 581 aa10.29□□□□□ -0.76
TMCC1-208ENST00000508869 RIMBP2O15034 1052 aa10.29□□□□□ -0.76
TMCC1-208ENST00000508869 POTEBQ6S5H4 581 aa10.29□□□□□ -0.76
TMCC1-208ENST00000508869 PCDHGA4Q9Y5G9 962 aa10.29□□□□□ -0.76
TMCC1-208ENST00000508869 SLC34A2O95436 690 aa10.28□□□□□ -0.76
TMCC1-208ENST00000508869 EMP3P54852 163 aa10.28□□□□□ -0.76
TMCC1-208ENST00000508869 UPF1Q92900 1129 aaKnown RBP eCLIP10.28□□□□□ -0.76
TMCC1-208ENST00000508869 FAM205CA6NFA0 338 aa10.26□□□□□ -0.77
TMCC1-208ENST00000508869 NUDT7P0C024 238 aa10.26□□□□□ -0.77
TMCC1-208ENST00000508869 ZSWIM6Q9HCJ5 1215 aa10.26□□□□□ -0.77
TMCC1-208ENST00000508869 PTCD2Q8WV60 388 aaKnown RBP10.25□□□□□ -0.77
TMCC1-208ENST00000508869 EMILIN3Q9NT22 766 aa10.25□□□□□ -0.77
TMCC1-208ENST00000508869 OXER1Q8TDS5 423 aa10.23□□□□□ -0.77
TMCC1-208ENST00000508869 HAP1P54257 671 aaPredicted RBP10.22□□□□□ -0.77
TMCC1-208ENST00000508869 HS3ST6Q96QI5 342 aa10.22□□□□□ -0.77
TMCC1-208ENST00000508869 ERBB3P21860 1342 aa10.21□□□□□ -0.78
TMCC1-208ENST00000508869 KDM4FA0A1W2PPD8 638 aa10.19□□□□□ -0.78
TMCC1-208ENST00000508869 CAMK2BQ13554 666 aa10.18□□□□□ -0.78
TMCC1-208ENST00000508869 VARS2Q5ST30 1063 aaKnown RBP10.18□□□□□ -0.78
TMCC1-208ENST00000508869 LHX6Q9UPM6 363 aa10.18□□□□□ -0.78
TMCC1-208ENST00000508869 CDAN1Q8IWY9 1227 aa10.17□□□□□ -0.78
TMCC1-208ENST00000508869 WDR70Q9NW82 654 aa10.17□□□□□ -0.78
TMCC1-208ENST00000508869 ZNF316A6NFI3 1004 aaPredicted RBP10.16□□□□□ -0.78
TMCC1-208ENST00000508869 TBC1D12O60347 775 aa10.15□□□□□ -0.78
TMCC1-208ENST00000508869 MAP3K9P80192 1104 aa10.15□□□□□ -0.78
TMCC1-208ENST00000508869 DPYSL4O14531 572 aa10.14□□□□□ -0.79
TMCC1-208ENST00000508869 E2F4Q16254 413 aa10.13□□□□□ -0.79
TMCC1-208ENST00000508869 EVI5O60447 810 aa10.12□□□□□ -0.79
TMCC1-208ENST00000508869 KDM2AQ9Y2K7 1162 aa10.11□□□□□ -0.79
TMCC1-208ENST00000508869 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
TMCC1-208ENST00000508869 KRTAP3-2Q9BYR7 98 aa10.08□□□□□ -0.8
TMCC1-208ENST00000508869 POTEEQ6S8J3 1075 aa10.07□□□□□ -0.8
TMCC1-208ENST00000508869 ZNF687Q8N1G0 1237 aa10.07□□□□□ -0.8
TMCC1-208ENST00000508869 ANO8Q9HCE9 1232 aaPredicted RBP10.07□□□□□ -0.8
TMCC1-208ENST00000508869 KCNV2Q8TDN2 545 aa10.06□□□□□ -0.8
TMCC1-208ENST00000508869 AXIN2Q9Y2T1 843 aa10.05□□□□□ -0.8
TMCC1-208ENST00000508869 ZNF454Q8N9F8 522 aa10.04□□□□□ -0.8
TMCC1-208ENST00000508869 PCDH10Q9P2E7 1040 aa10.03□□□□□ -0.8
TMCC1-208ENST00000508869 FOSBP53539 338 aa10.01□□□□□ -0.81
TMCC1-208ENST00000508869 PDIA6Q15084 440 aa10□□□□□ -0.81
TMCC1-208ENST00000508869 PPP4R3BQ5MIZ7 849 aa10□□□□□ -0.81
TMCC1-208ENST00000508869 DDX12PQ92771 950 aa10□□□□□ -0.81
TMCC1-208ENST00000508869 PSEN2P49810 448 aa9.99□□□□□ -0.81
TMCC1-208ENST00000508869 ARIH1Q9Y4X5 557 aaPredicted RBP9.99□□□□□ -0.81
TMCC1-208ENST00000508869 PCDHGA10Q9Y5H3 936 aa9.99□□□□□ -0.81
TMCC1-208ENST00000508869 JPH4Q96JJ6 628 aa9.98□□□□□ -0.81
TMCC1-208ENST00000508869 PSDA5PKW4 1024 aaPredicted RBP9.97□□□□□ -0.81
TMCC1-208ENST00000508869 VSIG10Q8N0Z9 540 aa9.97□□□□□ -0.81
TMCC1-208ENST00000508869 ADAM33Q9BZ11 813 aa9.97□□□□□ -0.81
TMCC1-208ENST00000508869 ARHGEF1Q92888 912 aaKnown RBP9.96□□□□□ -0.82
TMCC1-208ENST00000508869 SPDYE16A6NNV3 312 aaPredicted RBP9.95□□□□□ -0.82
TMCC1-208ENST00000508869 DMRTA1Q5VZB9 504 aa9.95□□□□□ -0.82
TMCC1-208ENST00000508869 ZDHHC16Q969W1 377 aa9.95□□□□□ -0.82
TMCC1-208ENST00000508869 GRXCR2A6NFK2 248 aa9.94□□□□□ -0.82
TMCC1-208ENST00000508869 PHF14O94880 888 aa9.94□□□□□ -0.82
TMCC1-208ENST00000508869 PTGER2P43116 358 aa9.94□□□□□ -0.82
TMCC1-208ENST00000508869 ANKRD13DQ6ZTN6 518 aa9.94□□□□□ -0.82
TMCC1-208ENST00000508869 ARHGAP33O14559 1287 aa9.93□□□□□ -0.82
TMCC1-208ENST00000508869 PRIM1P49642 420 aaKnown RBP9.93□□□□□ -0.82
TMCC1-208ENST00000508869 KCNK17Q96T54 332 aa9.93□□□□□ -0.82
TMCC1-208ENST00000508869 PLSCR2Q9NRY7 297 aa9.93□□□□□ -0.82
TMCC1-208ENST00000508869 RBM33Q96EV2 1170 aaKnown RBP9.92□□□□□ -0.82
TMCC1-208ENST00000508869 MLLT3P42568 568 aaPredicted RBP9.91□□□□□ -0.82
TMCC1-208ENST00000508869 NBR1Q14596 966 aa9.91□□□□□ -0.82
TMCC1-208ENST00000508869 SPNS2Q8IVW8 549 aa9.91□□□□□ -0.82
TMCC1-208ENST00000508869 BCL2L12Q9HB09 334 aa9.91□□□□□ -0.82
TMCC1-208ENST00000508869 LSM11P83369 360 aaKnown RBP eCLIP9.9□□□□□ -0.82
TMCC1-208ENST00000508869 TYW1BQ6NUM6 668 aa9.9□□□□□ -0.82
TMCC1-208ENST00000508869 P3H3Q8IVL6 736 aa9.9□□□□□ -0.82
TMCC1-208ENST00000508869 SEMA3EO15041 775 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms