RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 POGZQ7Z3K3 1410 aa22.09■■□□□ 1.13
CCHCR1-227ENST00000508852 SCAPERQ9BY12 1400 aa22.07■■□□□ 1.12
CCHCR1-227ENST00000508852 ZFYVE16Q7Z3T8 1539 aa22.07■■□□□ 1.12
CCHCR1-227ENST00000508852 LRRIQ1Q96JM4 1722 aa22.06■■□□□ 1.12
CCHCR1-227ENST00000508852 PTPRMP28827 1452 aa22.05■■□□□ 1.12
CCHCR1-227ENST00000508852 FYCO1Q9BQS8 1478 aa22.04■■□□□ 1.12
CCHCR1-227ENST00000508852 PCF11O94913 1555 aaKnown RBP22.03■■□□□ 1.12
CCHCR1-227ENST00000508852 ARHGAP5Q13017 1502 aa22.02■■□□□ 1.12
CCHCR1-227ENST00000508852 ZNF518AQ6AHZ1 1483 aa22.01■■□□□ 1.11
CCHCR1-227ENST00000508852 MADDQ8WXG6 1647 aa21.99■■□□□ 1.11
CCHCR1-227ENST00000508852 ATP10AO60312 1499 aa21.96■■□□□ 1.11
CCHCR1-227ENST00000508852 YEATS2Q9ULM3 1422 aa21.96■■□□□ 1.11
CCHCR1-227ENST00000508852 PREX2Q70Z35 1606 aa21.95■■□□□ 1.1
CCHCR1-227ENST00000508852 CDC42BPBQ9Y5S2 1711 aa21.95■■□□□ 1.1
CCHCR1-227ENST00000508852 C9orf84Q5VXU9 1444 aa21.94■■□□□ 1.1
CCHCR1-227ENST00000508852 RIMS1Q86UR5 1692 aaKnown RBP21.94■■□□□ 1.1
CCHCR1-227ENST00000508852 KDM5CP41229 1560 aa21.93■■□□□ 1.1
CCHCR1-227ENST00000508852 FER1L4A9Z1Z3 1794 aa21.89■■□□□ 1.09
CCHCR1-227ENST00000508852 CDC42BPAQ5VT25 1732 aa21.89■■□□□ 1.09
CCHCR1-227ENST00000508852 MYT1LQ9UL68 1186 aa21.88■■□□□ 1.09
CCHCR1-227ENST00000508852 MLH3Q9UHC1 1453 aa21.88■■□□□ 1.09
CCHCR1-227ENST00000508852 ABCC1P33527 1531 aa21.87■■□□□ 1.09
CCHCR1-227ENST00000508852 AFAP1Q8N556 730 aa21.87■■□□□ 1.09
CCHCR1-227ENST00000508852 REREQ9P2R6 1566 aa21.87■■□□□ 1.09
CCHCR1-227ENST00000508852 ITSN2Q9NZM3 1697 aa21.85■■□□□ 1.09
CCHCR1-227ENST00000508852 SIGLEC1Q9BZZ2 1709 aa21.85■■□□□ 1.09
CCHCR1-227ENST00000508852 ARHGEF12Q9NZN5 1544 aa21.84■■□□□ 1.09
CCHCR1-227ENST00000508852 MLECQ14165 292 aa21.82■■□□□ 1.08
CCHCR1-227ENST00000508852 MTUS2Q5JR59 1369 aa21.81■■□□□ 1.08
CCHCR1-227ENST00000508852 PLEKHH2Q8IVE3 1493 aa21.81■■□□□ 1.08
CCHCR1-227ENST00000508852 DIP2CQ9Y2E4 1556 aa21.81■■□□□ 1.08
CCHCR1-227ENST00000508852 LMTK3Q96Q04 1460 aa21.8■■□□□ 1.08
CCHCR1-227ENST00000508852 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
CCHCR1-227ENST00000508852 CCNB3Q8WWL7 1395 aa21.78■■□□□ 1.08
CCHCR1-227ENST00000508852 AGLP35573 1532 aa21.78■■□□□ 1.08
CCHCR1-227ENST00000508852 CEP162Q5TB80 1403 aa21.78■■□□□ 1.08
CCHCR1-227ENST00000508852 TRAPPC8Q9Y2L5 1435 aa21.78■■□□□ 1.08
CCHCR1-227ENST00000508852 KIAA1107Q9UPP5 1409 aa21.77■■□□□ 1.08
CCHCR1-227ENST00000508852 CFDP1Q9UEE9 299 aaPredicted RBP21.76■■□□□ 1.07
CCHCR1-227ENST00000508852 ABCA6Q8N139 1617 aa21.76■■□□□ 1.07
CCHCR1-227ENST00000508852 ZNF777Q9ULD5 760 aaPredicted RBP21.75■■□□□ 1.07
CCHCR1-227ENST00000508852 EHBP1L1Q8N3D4 1523 aa21.75■■□□□ 1.07
CCHCR1-227ENST00000508852 SAMD9LQ8IVG5 1584 aa21.74■■□□□ 1.07
CCHCR1-227ENST00000508852 ILDR1Q86SU0 546 aaPredicted RBP21.74■■□□□ 1.07
CCHCR1-227ENST00000508852 ESF1Q9H501 851 aaKnown RBP21.74■■□□□ 1.07
CCHCR1-227ENST00000508852 KIDINS220Q9ULH0 1771 aa21.74■■□□□ 1.07
CCHCR1-227ENST00000508852 SETD1BQ9UPS6 1966 aaKnown RBP21.72■■□□□ 1.07
CCHCR1-227ENST00000508852 SYCP2Q9BX26 1530 aa21.71■■□□□ 1.07
CCHCR1-227ENST00000508852 PLPPR3Q6T4P5 718 aa21.71■■□□□ 1.07
CCHCR1-227ENST00000508852 PREX1Q8TCU6 1659 aa21.71■■□□□ 1.07
CCHCR1-227ENST00000508852 SPAG9O60271 1321 aaKnown RBP21.71■■□□□ 1.07
CCHCR1-227ENST00000508852 CNTLNQ9NXG0 1405 aa21.69■■□□□ 1.06
CCHCR1-227ENST00000508852 HNRNPMP52272 730 aaKnown RBP eCLIP21.66■■□□□ 1.06
CCHCR1-227ENST00000508852 ATP7AQ04656 1500 aa21.65■■□□□ 1.06
CCHCR1-227ENST00000508852 TIAM1Q13009 1591 aa21.65■■□□□ 1.06
CCHCR1-227ENST00000508852 SUPT6HQ7KZ85 1726 aaKnown RBP21.64■■□□□ 1.06
CCHCR1-227ENST00000508852 INO80Q9ULG1 1556 aaPredicted RBP21.63■■□□□ 1.05
CCHCR1-227ENST00000508852 UHRF1BP1Q6BDS2 1440 aa21.63■■□□□ 1.05
CCHCR1-227ENST00000508852 C3P01024 1663 aa21.61■■□□□ 1.05
CCHCR1-227ENST00000508852 HSPA2P54652 639 aa21.61■■□□□ 1.05
CCHCR1-227ENST00000508852 RSPH4AQ5TD94 716 aa21.61■■□□□ 1.05
CCHCR1-227ENST00000508852 MROH2AA6NES4 1674 aa21.6■■□□□ 1.05
CCHCR1-227ENST00000508852 ADGBQ8N7X0 1667 aa21.6■■□□□ 1.05
CCHCR1-227ENST00000508852 CEBPAP49715 358 aaPredicted RBP21.6■■□□□ 1.05
CCHCR1-227ENST00000508852 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
CCHCR1-227ENST00000508852 RTEL1-TNFRSF6BF6WH68 1400 aa21.59■■□□□ 1.05
CCHCR1-227ENST00000508852 FBXO41Q8TF61 875 aa21.59■■□□□ 1.05
CCHCR1-227ENST00000508852 PPP6R1Q9UPN7 881 aa21.59■■□□□ 1.05
CCHCR1-227ENST00000508852 A2MP01023 1474 aa21.58■■□□□ 1.05
CCHCR1-227ENST00000508852 VPS8Q8N3P4 1428 aa21.58■■□□□ 1.05
CCHCR1-227ENST00000508852 PLXNC1O60486 1568 aa21.57■■□□□ 1.04
CCHCR1-227ENST00000508852 NCOA2Q15596 1464 aa21.56■■□□□ 1.04
CCHCR1-227ENST00000508852 MBD5Q9P267 1494 aa21.55■■□□□ 1.04
CCHCR1-227ENST00000508852 MAP3K1Q13233 1512 aa21.54■■□□□ 1.04
CCHCR1-227ENST00000508852 NPATQ14207 1427 aa21.54■■□□□ 1.04
CCHCR1-227ENST00000508852 ZNF644Q9H582 1327 aaPredicted RBP21.51■■□□□ 1.03
CCHCR1-227ENST00000508852 CCDC141Q6ZP82 1450 aa21.51■■□□□ 1.03
CCHCR1-227ENST00000508852 ZMYM3Q14202 1370 aa21.5■■□□□ 1.03
CCHCR1-227ENST00000508852 LOC105371045A0A1W2PR82 267 aa21.5■■□□□ 1.03
CCHCR1-227ENST00000508852 LRRC9Q6ZRR7 1453 aa21.5■■□□□ 1.03
CCHCR1-227ENST00000508852 CAMSAP2Q08AD1 1489 aa21.49■■□□□ 1.03
CCHCR1-227ENST00000508852 DHX29Q7Z478 1369 aaKnown RBP21.48■■□□□ 1.03
CCHCR1-227ENST00000508852 CLTCQ00610 1675 aaKnown RBP21.47■■□□□ 1.03
CCHCR1-227ENST00000508852 TSPY4P0CV99 314 aa21.47■■□□□ 1.03
CCHCR1-227ENST00000508852 TSPY10P0CW01 314 aa21.47■■□□□ 1.03
CCHCR1-227ENST00000508852 ARHGEF5Q12774 1597 aa21.47■■□□□ 1.03
CCHCR1-227ENST00000508852 STRCQ7RTU9 1775 aa21.46■■□□□ 1.03
CCHCR1-227ENST00000508852 GGT6Q6P531 493 aa21.46■■□□□ 1.03
CCHCR1-227ENST00000508852 FAM135AQ9P2D6 1515 aa21.45■■□□□ 1.02
CCHCR1-227ENST00000508852 PTPRTO14522 1441 aa21.43■■□□□ 1.02
CCHCR1-227ENST00000508852 APLP2Q06481 763 aa21.42■■□□□ 1.02
CCHCR1-227ENST00000508852 MIA2Q96PC5 1412 aa21.41■■□□□ 1.02
CCHCR1-227ENST00000508852 CERKQ8TCT0 537 aa21.41■■□□□ 1.02
CCHCR1-227ENST00000508852 PTPRKQ15262 1439 aa21.38■■□□□ 1.01
CCHCR1-227ENST00000508852 ZNF142P52746 1687 aaPredicted RBP21.37■■□□□ 1.01
CCHCR1-227ENST00000508852 NCOA1Q15788 1441 aa21.37■■□□□ 1.01
CCHCR1-227ENST00000508852 MYOM3Q5VTT5 1437 aa21.37■■□□□ 1.01
CCHCR1-227ENST00000508852 MAST1Q9Y2H9 1570 aa21.36■■□□□ 1.01
CCHCR1-227ENST00000508852 KIF3BO15066 747 aa21.36■■□□□ 1.01
CCHCR1-227ENST00000508852 MYO3AQ8NEV4 1616 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms