RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 CDC42BPBQ9Y5S2 1711 aa37.61■■■■□ 3.61
CSNK1G3-204ENST00000508708 ARHGEF40Q8TER5 1519 aa37.6■■■■□ 3.61
CSNK1G3-204ENST00000508708 POGZQ7Z3K3 1410 aa37.6■■■■□ 3.61
CSNK1G3-204ENST00000508708 EFCAB2Q5VUJ9 269 aa37.59■■■■□ 3.61
CSNK1G3-204ENST00000508708 SCAPERQ9BY12 1400 aa37.59■■■■□ 3.61
CSNK1G3-204ENST00000508708 CDC42BPAQ5VT25 1732 aa37.55■■■■□ 3.6
CSNK1G3-204ENST00000508708 VPS8Q8N3P4 1428 aa37.51■■■■□ 3.59
CSNK1G3-204ENST00000508708 EHBP1L1Q8N3D4 1523 aa37.48■■■■□ 3.59
CSNK1G3-204ENST00000508708 MAGI2Q86UL8 1455 aa37.48■■■■□ 3.59
CSNK1G3-204ENST00000508708 ABCC1P33527 1531 aa37.46■■■■□ 3.59
CSNK1G3-204ENST00000508708 ZFYVE16Q7Z3T8 1539 aa37.46■■■■□ 3.59
CSNK1G3-204ENST00000508708 MTUS2Q5JR59 1369 aa37.46■■■■□ 3.59
CSNK1G3-204ENST00000508708 GPATCH8Q9UKJ3 1502 aaKnown RBP37.46■■■■□ 3.59
CSNK1G3-204ENST00000508708 YEATS2Q9ULM3 1422 aa37.45■■■■□ 3.59
CSNK1G3-204ENST00000508708 KDM5CP41229 1560 aa37.44■■■■□ 3.58
CSNK1G3-204ENST00000508708 ZNF518AQ6AHZ1 1483 aa37.43■■■■□ 3.58
CSNK1G3-204ENST00000508708 ARHGEF12Q9NZN5 1544 aa37.41■■■■□ 3.58
CSNK1G3-204ENST00000508708 TIAM1Q13009 1591 aa37.39■■■■□ 3.58
CSNK1G3-204ENST00000508708 ITSN2Q9NZM3 1697 aa37.38■■■■□ 3.57
CSNK1G3-204ENST00000508708 SAMD9LQ8IVG5 1584 aa37.36■■■■□ 3.57
CSNK1G3-204ENST00000508708 SIGLEC1Q9BZZ2 1709 aa37.36■■■■□ 3.57
CSNK1G3-204ENST00000508708 ADAMTSL3P82987 1691 aa37.35■■■■□ 3.57
CSNK1G3-204ENST00000508708 BCORL1Q5H9F3 1711 aa37.34■■■■□ 3.57
CSNK1G3-204ENST00000508708 TRAPPC8Q9Y2L5 1435 aa37.32■■■■□ 3.56
CSNK1G3-204ENST00000508708 CCNB3Q8WWL7 1395 aa37.31■■■■□ 3.56
CSNK1G3-204ENST00000508708 HECW2Q9P2P5 1572 aa37.3■■■■□ 3.56
CSNK1G3-204ENST00000508708 AFAP1Q8N556 730 aa37.3■■■■□ 3.56
CSNK1G3-204ENST00000508708 MLH3Q9UHC1 1453 aa37.26■■■■□ 3.55
CSNK1G3-204ENST00000508708 SYCP2Q9BX26 1530 aa37.26■■■■□ 3.55
CSNK1G3-204ENST00000508708 ATP10AO60312 1499 aa37.25■■■■□ 3.55
CSNK1G3-204ENST00000508708 MAP3K1Q13233 1512 aa37.25■■■■□ 3.55
CSNK1G3-204ENST00000508708 SUPT6HQ7KZ85 1726 aaKnown RBP37.24■■■■□ 3.55
CSNK1G3-204ENST00000508708 NCOA2Q15596 1464 aa37.23■■■■□ 3.55
CSNK1G3-204ENST00000508708 C9orf84Q5VXU9 1444 aa37.23■■■■□ 3.55
CSNK1G3-204ENST00000508708 DIP2CQ9Y2E4 1556 aa37.22■■■■□ 3.55
CSNK1G3-204ENST00000508708 LRRC9Q6ZRR7 1453 aa37.22■■■■□ 3.55
CSNK1G3-204ENST00000508708 MADDQ8WXG6 1647 aa37.21■■■■□ 3.55
CSNK1G3-204ENST00000508708 ARID4BQ4LE39 1312 aaPredicted RBP37.21■■■■□ 3.55
CSNK1G3-204ENST00000508708 CFDP1Q9UEE9 299 aaPredicted RBP37.21■■■■□ 3.55
CSNK1G3-204ENST00000508708 KIAA1107Q9UPP5 1409 aa37.2■■■■□ 3.55
CSNK1G3-204ENST00000508708 ABCA6Q8N139 1617 aa37.2■■■■□ 3.55
CSNK1G3-204ENST00000508708 PLEKHH2Q8IVE3 1493 aa37.2■■■■□ 3.54
CSNK1G3-204ENST00000508708 ZNF777Q9ULD5 760 aaPredicted RBP37.19■■■■□ 3.54
CSNK1G3-204ENST00000508708 REREQ9P2R6 1566 aa37.17■■■■□ 3.54
CSNK1G3-204ENST00000508708 KIDINS220Q9ULH0 1771 aa37.15■■■■□ 3.54
CSNK1G3-204ENST00000508708 PTPRMP28827 1452 aa37.14■■■■□ 3.54
CSNK1G3-204ENST00000508708 HNRNPMP52272 730 aaKnown RBP eCLIP37.08■■■■□ 3.536e-6■■■■□ 20.3
CSNK1G3-204ENST00000508708 KANK4Q5T7N3 995 aaPredicted RBP37.07■■■■□ 3.52
CSNK1G3-204ENST00000508708 ZNF644Q9H582 1327 aaPredicted RBP37.07■■■■□ 3.52
CSNK1G3-204ENST00000508708 MBD5Q9P267 1494 aa37.07■■■■□ 3.52
CSNK1G3-204ENST00000508708 INO80Q9ULG1 1556 aaPredicted RBP37.06■■■■□ 3.52
CSNK1G3-204ENST00000508708 RIMS1Q86UR5 1692 aaKnown RBP37.05■■■■□ 3.52
CSNK1G3-204ENST00000508708 ATP7AQ04656 1500 aa37.01■■■■□ 3.52
CSNK1G3-204ENST00000508708 MYT1LQ9UL68 1186 aa37.01■■■■□ 3.52
CSNK1G3-204ENST00000508708 CAMSAP2Q08AD1 1489 aa37.01■■■■□ 3.51
CSNK1G3-204ENST00000508708 AGLP35573 1532 aa37■■■■□ 3.51
CSNK1G3-204ENST00000508708 FER1L4A9Z1Z3 1794 aa36.99■■■■□ 3.51
CSNK1G3-204ENST00000508708 SPAG9O60271 1321 aaKnown RBP36.99■■■■□ 3.51
CSNK1G3-204ENST00000508708 MLECQ14165 292 aa36.96■■■■□ 3.51
CSNK1G3-204ENST00000508708 PLXNC1O60486 1568 aa36.91■■■■□ 3.5
CSNK1G3-204ENST00000508708 CCDC141Q6ZP82 1450 aa36.89■■■■□ 3.5
CSNK1G3-204ENST00000508708 MYOM3Q5VTT5 1437 aa36.88■■■■□ 3.49
CSNK1G3-204ENST00000508708 ARHGEF5Q12774 1597 aa36.87■■■■□ 3.49
CSNK1G3-204ENST00000508708 RTEL1-TNFRSF6BF6WH68 1400 aa36.85■■■■□ 3.49
CSNK1G3-204ENST00000508708 MIA2Q96PC5 1412 aa36.85■■■■□ 3.49
CSNK1G3-204ENST00000508708 APLP2Q06481 763 aa36.83■■■■□ 3.49
CSNK1G3-204ENST00000508708 A2MP01023 1474 aa36.82■■■■□ 3.49
CSNK1G3-204ENST00000508708 ADGBQ8N7X0 1667 aa36.8■■■■□ 3.48
CSNK1G3-204ENST00000508708 RSPH4AQ5TD94 716 aa36.76■■■■□ 3.48
CSNK1G3-204ENST00000508708 LMTK3Q96Q04 1460 aa36.75■■■■□ 3.47
CSNK1G3-204ENST00000508708 MAST1Q9Y2H9 1570 aa36.7■■■■□ 3.46
CSNK1G3-204ENST00000508708 PTPN23Q9H3S7 1636 aa36.66■■■■□ 3.46
CSNK1G3-204ENST00000508708 C3P01024 1663 aa36.65■■■■□ 3.46
CSNK1G3-204ENST00000508708 PLPPR3Q6T4P5 718 aa36.65■■■■□ 3.46
CSNK1G3-204ENST00000508708 CNTLNQ9NXG0 1405 aa36.65■■■■□ 3.46
CSNK1G3-204ENST00000508708 DHX29Q7Z478 1369 aaKnown RBP36.65■■■■□ 3.46
CSNK1G3-204ENST00000508708 FGD6Q6ZV73 1430 aa36.64■■■■□ 3.46
CSNK1G3-204ENST00000508708 CEBPAP49715 358 aaPredicted RBP36.63■■■■□ 3.45
CSNK1G3-204ENST00000508708 TCOF1Q13428 1488 aaKnown RBP36.62■■■■□ 3.45
CSNK1G3-204ENST00000508708 MROH2AA6NES4 1674 aa36.61■■■■□ 3.45
CSNK1G3-204ENST00000508708 TSPY4P0CV99 314 aa36.58■■■■□ 3.45
CSNK1G3-204ENST00000508708 TSPY10P0CW01 314 aa36.58■■■■□ 3.45
CSNK1G3-204ENST00000508708 CROCC2H7BZ55 1655 aa36.56■■■■□ 3.44
CSNK1G3-204ENST00000508708 PREX1Q8TCU6 1659 aa36.56■■■■□ 3.44
CSNK1G3-204ENST00000508708 ESF1Q9H501 851 aaKnown RBP36.54■■■■□ 3.44
CSNK1G3-204ENST00000508708 SHANK2Q9UPX8 1470 aa36.54■■■■□ 3.44
CSNK1G3-204ENST00000508708 ABCC5O15440 1437 aa36.53■■■■□ 3.44
CSNK1G3-204ENST00000508708 CLTCQ00610 1675 aaKnown RBP36.53■■■■□ 3.44
CSNK1G3-204ENST00000508708 DNMT1P26358 1616 aaKnown RBP36.52■■■■□ 3.44
CSNK1G3-204ENST00000508708 GGT6Q6P531 493 aa36.49■■■■□ 3.43
CSNK1G3-204ENST00000508708 DAPK1P53355 1430 aa36.48■■■■□ 3.43
CSNK1G3-204ENST00000508708 SETD1BQ9UPS6 1966 aaKnown RBP36.47■■■■□ 3.43
CSNK1G3-204ENST00000508708 PPP6R1Q9UPN7 881 aa36.47■■■■□ 3.43
CSNK1G3-204ENST00000508708 ZMYM3Q14202 1370 aa36.47■■■■□ 3.43
CSNK1G3-204ENST00000508708 FAM135AQ9P2D6 1515 aa36.44■■■■□ 3.42
CSNK1G3-204ENST00000508708 KIF3BO15066 747 aa36.43■■■■□ 3.42
CSNK1G3-204ENST00000508708 HSPA2P54652 639 aa36.43■■■■□ 3.42
CSNK1G3-204ENST00000508708 NPATQ14207 1427 aa36.42■■■■□ 3.42
CSNK1G3-204ENST00000508708 RNF17Q9BXT8 1623 aaKnown RBP36.42■■■■□ 3.42
CSNK1G3-204ENST00000508708 EIF2AK4Q9P2K8 1649 aaKnown RBP36.42■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms