RNA–Protein interactions for RNA: ENST00000508642.1

SPOCK1-205, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 499 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-205ENST00000508642 TEX14Q8IWB6 1497 aa11.2□□□□□ -0.62
SPOCK1-205ENST00000508642 PLCH2O75038 1416 aa11.18□□□□□ -0.62
SPOCK1-205ENST00000508642 ARHGAP5Q13017 1502 aa11.18□□□□□ -0.62
SPOCK1-205ENST00000508642 GPATCH8Q9UKJ3 1502 aaKnown RBP11.17□□□□□ -0.62
SPOCK1-205ENST00000508642 RICTORQ6R327 1708 aa11.17□□□□□ -0.62
SPOCK1-205ENST00000508642 SAMD9LQ8IVG5 1584 aa11.16□□□□□ -0.62
SPOCK1-205ENST00000508642 FANCAO15360 1455 aa11.16□□□□□ -0.62
SPOCK1-205ENST00000508642 NEO1Q92859 1461 aa11.16□□□□□ -0.62
SPOCK1-205ENST00000508642 CCNB3Q8WWL7 1395 aa11.16□□□□□ -0.62
SPOCK1-205ENST00000508642 KDM6BO15054 1643 aa11.15□□□□□ -0.62
SPOCK1-205ENST00000508642 PTPN23Q9H3S7 1636 aa11.14□□□□□ -0.63
SPOCK1-205ENST00000508642 MYOM3Q5VTT5 1437 aa11.14□□□□□ -0.63
SPOCK1-205ENST00000508642 ABCC1P33527 1531 aa11.14□□□□□ -0.63
SPOCK1-205ENST00000508642 PHLDB1Q86UU1 1377 aa11.13□□□□□ -0.63
SPOCK1-205ENST00000508642 CROCC2H7BZ55 1655 aa11.12□□□□□ -0.63
SPOCK1-205ENST00000508642 FRMPD1Q5SYB0 1578 aa11.11□□□□□ -0.63
SPOCK1-205ENST00000508642 AKNAQ7Z591 1439 aa11.11□□□□□ -0.63
SPOCK1-205ENST00000508642 MIA2Q96PC5 1412 aa11.11□□□□□ -0.63
SPOCK1-205ENST00000508642 EFCAB2Q5VUJ9 269 aa11.1□□□□□ -0.63
SPOCK1-205ENST00000508642 ADGRL1O94910 1474 aa11.1□□□□□ -0.63
SPOCK1-205ENST00000508642 CAMSAP2Q08AD1 1489 aa11.1□□□□□ -0.63
SPOCK1-205ENST00000508642 PLEKHH2Q8IVE3 1493 aa11.1□□□□□ -0.63
SPOCK1-205ENST00000508642 FGD6Q6ZV73 1430 aa11.09□□□□□ -0.63
SPOCK1-205ENST00000508642 SYCP2Q9BX26 1530 aa11.09□□□□□ -0.63
SPOCK1-205ENST00000508642 ARHGEF5Q12774 1597 aa11.09□□□□□ -0.63
SPOCK1-205ENST00000508642 PPARGC1BQ86YN6 1023 aaKnown RBP11.09□□□□□ -0.63
SPOCK1-205ENST00000508642 CFDP1Q9UEE9 299 aaPredicted RBP11.09□□□□□ -0.63
SPOCK1-205ENST00000508642 KDM5CP41229 1560 aa11.07□□□□□ -0.64
SPOCK1-205ENST00000508642 TCOF1Q13428 1488 aaKnown RBP11.07□□□□□ -0.64
SPOCK1-205ENST00000508642 DNMT1P26358 1616 aaKnown RBP11.07□□□□□ -0.64
SPOCK1-205ENST00000508642 ZMYM4Q5VZL5 1548 aa11.07□□□□□ -0.64
SPOCK1-205ENST00000508642 ARHGEF12Q9NZN5 1544 aa11.07□□□□□ -0.64
SPOCK1-205ENST00000508642 KIAA1107Q9UPP5 1409 aa11.07□□□□□ -0.64
SPOCK1-205ENST00000508642 DENND4BO75064 1496 aaPredicted RBP11.06□□□□□ -0.64
SPOCK1-205ENST00000508642 COL17A1Q9UMD9 1497 aaPredicted RBP11.06□□□□□ -0.64
SPOCK1-205ENST00000508642 ADGBQ8N7X0 1667 aa11.06□□□□□ -0.64
SPOCK1-205ENST00000508642 POGZQ7Z3K3 1410 aa11.06□□□□□ -0.64
SPOCK1-205ENST00000508642 SCAPERQ9BY12 1400 aa11.06□□□□□ -0.64
SPOCK1-205ENST00000508642 HECW2Q9P2P5 1572 aa11.06□□□□□ -0.64
SPOCK1-205ENST00000508642 ZNF518AQ6AHZ1 1483 aa11.06□□□□□ -0.64
SPOCK1-205ENST00000508642 KIDINS220Q9ULH0 1771 aa11.05□□□□□ -0.64
SPOCK1-205ENST00000508642 INO80Q9ULG1 1556 aaPredicted RBP11.05□□□□□ -0.64
SPOCK1-205ENST00000508642 ZNF777Q9ULD5 760 aaPredicted RBP11.04□□□□□ -0.64
SPOCK1-205ENST00000508642 MBD5Q9P267 1494 aa11.04□□□□□ -0.64
SPOCK1-205ENST00000508642 ZNF644Q9H582 1327 aaPredicted RBP11.04□□□□□ -0.64
SPOCK1-205ENST00000508642 MAST1Q9Y2H9 1570 aa11.03□□□□□ -0.64
SPOCK1-205ENST00000508642 RRBP1Q9P2E9 1410 aaKnown RBP11.03□□□□□ -0.64
SPOCK1-205ENST00000508642 CCDC141Q6ZP82 1450 aa11.03□□□□□ -0.64
SPOCK1-205ENST00000508642 TRAPPC8Q9Y2L5 1435 aa11.02□□□□□ -0.64
SPOCK1-205ENST00000508642 ARHGEF40Q8TER5 1519 aa11.02□□□□□ -0.65
SPOCK1-205ENST00000508642 ABCA6Q8N139 1617 aa11.02□□□□□ -0.65
SPOCK1-205ENST00000508642 ZFYVE16Q7Z3T8 1539 aa11.01□□□□□ -0.65
SPOCK1-205ENST00000508642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.01□□□□□ -0.65
SPOCK1-205ENST00000508642 ATP7AQ04656 1500 aa11□□□□□ -0.65
SPOCK1-205ENST00000508642 PLXNC1O60486 1568 aa11□□□□□ -0.65
SPOCK1-205ENST00000508642 HNRNPMP52272 730 aaKnown RBP eCLIP11□□□□□ -0.65
SPOCK1-205ENST00000508642 MAGI2Q86UL8 1455 aa11□□□□□ -0.65
SPOCK1-205ENST00000508642 MLH3Q9UHC1 1453 aa11□□□□□ -0.65
SPOCK1-205ENST00000508642 SHANK2Q9UPX8 1470 aa11□□□□□ -0.65
SPOCK1-205ENST00000508642 DIP2CQ9Y2E4 1556 aa10.99□□□□□ -0.65
SPOCK1-205ENST00000508642 RAPGEF3O95398 923 aa10.99□□□□□ -0.65
SPOCK1-205ENST00000508642 DAPK1P53355 1430 aa10.99□□□□□ -0.65
SPOCK1-205ENST00000508642 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
SPOCK1-205ENST00000508642 SIGLEC1Q9BZZ2 1709 aa10.98□□□□□ -0.65
SPOCK1-205ENST00000508642 FAM50AQ14320 339 aaKnown RBP10.97□□□□□ -0.65
SPOCK1-205ENST00000508642 AFAP1Q8N556 730 aa10.97□□□□□ -0.65
SPOCK1-205ENST00000508642 ABCC5O15440 1437 aa10.97□□□□□ -0.65
SPOCK1-205ENST00000508642 REREQ9P2R6 1566 aa10.97□□□□□ -0.65
SPOCK1-205ENST00000508642 RTEL1-TNFRSF6BF6WH68 1400 aa10.96□□□□□ -0.65
SPOCK1-205ENST00000508642 BCORL1Q5H9F3 1711 aa10.95□□□□□ -0.66
SPOCK1-205ENST00000508642 GCC2Q8IWJ2 1684 aa10.95□□□□□ -0.66
SPOCK1-205ENST00000508642 C9orf84Q5VXU9 1444 aa10.95□□□□□ -0.66
SPOCK1-205ENST00000508642 ADGRL2O95490 1459 aa10.94□□□□□ -0.66
SPOCK1-205ENST00000508642 YEATS2Q9ULM3 1422 aa10.94□□□□□ -0.66
SPOCK1-205ENST00000508642 SPAG9O60271 1321 aaKnown RBP10.94□□□□□ -0.66
SPOCK1-205ENST00000508642 EIF2AK4Q9P2K8 1649 aaKnown RBP10.94□□□□□ -0.66
SPOCK1-205ENST00000508642 ATP10AO60312 1499 aa10.93□□□□□ -0.66
SPOCK1-205ENST00000508642 TSPY4P0CV99 314 aa10.92□□□□□ -0.66
SPOCK1-205ENST00000508642 TSPY10P0CW01 314 aa10.92□□□□□ -0.66
SPOCK1-205ENST00000508642 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
SPOCK1-205ENST00000508642 DUOX2Q9NRD8 1548 aa10.91□□□□□ -0.66
SPOCK1-205ENST00000508642 MYT1LQ9UL68 1186 aa10.9□□□□□ -0.66
SPOCK1-205ENST00000508642 FER1L4A9Z1Z3 1794 aa10.9□□□□□ -0.67
SPOCK1-205ENST00000508642 AGLP35573 1532 aa10.89□□□□□ -0.67
SPOCK1-205ENST00000508642 A2MP01023 1474 aa10.89□□□□□ -0.67
SPOCK1-205ENST00000508642 DEPDC5O75140 1603 aa10.89□□□□□ -0.67
SPOCK1-205ENST00000508642 RNF17Q9BXT8 1623 aaKnown RBP10.89□□□□□ -0.67
SPOCK1-205ENST00000508642 NCOA1Q15788 1441 aa10.89□□□□□ -0.67
SPOCK1-205ENST00000508642 ROCK1Q13464 1354 aa10.89□□□□□ -0.67
SPOCK1-205ENST00000508642 ANKRD30AQ9BXX3 1397 aa10.89□□□□□ -0.67
SPOCK1-205ENST00000508642 ITGAEP38570 1179 aa10.87□□□□□ -0.67
SPOCK1-205ENST00000508642 KIF15Q9NS87 1388 aa10.87□□□□□ -0.67
SPOCK1-205ENST00000508642 ADAMTSL3P82987 1691 aa10.86□□□□□ -0.67
SPOCK1-205ENST00000508642 CHIC2Q9UKJ5 165 aa10.86□□□□□ -0.67
SPOCK1-205ENST00000508642 DHX29Q7Z478 1369 aaKnown RBP10.86□□□□□ -0.67
SPOCK1-205ENST00000508642 CEP152O94986 1710 aa10.86□□□□□ -0.67
SPOCK1-205ENST00000508642 ZC3H13Q5T200 1668 aaKnown RBP10.85□□□□□ -0.67
SPOCK1-205ENST00000508642 ERBINQ96RT1 1412 aa10.85□□□□□ -0.67
SPOCK1-205ENST00000508642 UNC13BO14795 1591 aa10.85□□□□□ -0.67
SPOCK1-205ENST00000508642 MROH2AA6NES4 1674 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms