RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 NLRP6P59044 892 aa11.33□□□□□ -0.6
GYPB-209ENST00000508618 FBXO22Q8NEZ5 403 aa11.32□□□□□ -0.6
GYPB-209ENST00000508618 BCL11BQ9C0K0 894 aaPredicted RBP11.32□□□□□ -0.6
GYPB-209ENST00000508618 ERBB3P21860 1342 aa11.28□□□□□ -0.6
GYPB-209ENST00000508618 STK24Q9Y6E0 443 aa11.26□□□□□ -0.61
GYPB-209ENST00000508618 GPR153Q6NV75 609 aa11.25□□□□□ -0.61
GYPB-209ENST00000508618 MFRPQ9BY79 579 aa11.25□□□□□ -0.61
GYPB-209ENST00000508618 ECM2O94769 699 aaPredicted RBP11.24□□□□□ -0.61
GYPB-209ENST00000508618 STK25O00506 426 aa11.23□□□□□ -0.61
GYPB-209ENST00000508618 VARS2Q5ST30 1063 aaKnown RBP11.22□□□□□ -0.61
GYPB-209ENST00000508618 KIF3CO14782 793 aa11.19□□□□□ -0.62
GYPB-209ENST00000508618 PKD2Q13563 968 aa11.19□□□□□ -0.62
GYPB-209ENST00000508618 ZNF687Q8N1G0 1237 aa11.19□□□□□ -0.62
GYPB-209ENST00000508618 RGL2O15211 777 aa11.15□□□□□ -0.62
GYPB-209ENST00000508618 PTGER2P43116 358 aa11.13□□□□□ -0.63
GYPB-209ENST00000508618 ARSIQ5FYB1 569 aa11.12□□□□□ -0.63
GYPB-209ENST00000508618 C2orf72A6NCS6 295 aa11.11□□□□□ -0.63
GYPB-209ENST00000508618 SLC34A2O95436 690 aa11.11□□□□□ -0.63
GYPB-209ENST00000508618 ZNF316A6NFI3 1004 aaPredicted RBP11.1□□□□□ -0.63
GYPB-209ENST00000508618 RNF166Q96A37 237 aaPredicted RBP11.09□□□□□ -0.63
GYPB-209ENST00000508618 TMC2Q8TDI7 906 aa11.05□□□□□ -0.64
GYPB-209ENST00000508618 MYT1LQ9UL68 1186 aa11.05□□□□□ -0.64
GYPB-209ENST00000508618 PBX2P40425 430 aa11.04□□□□□ -0.64
GYPB-209ENST00000508618 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.644e-6■■■■□ 21.1
GYPB-209ENST00000508618 HS6ST3Q8IZP7 471 aa11.02□□□□□ -0.65
GYPB-209ENST00000508618 PCDHGA4Q9Y5G9 962 aa11.01□□□□□ -0.65
GYPB-209ENST00000508618 LSM11P83369 360 aaKnown RBP eCLIP11□□□□□ -0.65
GYPB-209ENST00000508618 NUDT7P0C024 238 aa10.99□□□□□ -0.65
GYPB-209ENST00000508618 PPP1R37O75864 691 aa10.98□□□□□ -0.65
GYPB-209ENST00000508618 PSDA5PKW4 1024 aaPredicted RBP10.97□□□□□ -0.65
GYPB-209ENST00000508618 LHX6Q9UPM6 363 aa10.95□□□□□ -0.66
GYPB-209ENST00000508618 DNAJC5Q9H3Z4 198 aa10.94□□□□□ -0.66
GYPB-209ENST00000508618 FOXK1P85037 733 aa10.93□□□□□ -0.66
GYPB-209ENST00000508618 ANKRD13DQ6ZTN6 518 aa10.93□□□□□ -0.66
GYPB-209ENST00000508618 PTCD2Q8WV60 388 aaKnown RBP10.93□□□□□ -0.66
GYPB-209ENST00000508618 KDM4FA0A1W2PPD8 638 aa10.92□□□□□ -0.66
GYPB-209ENST00000508618 POTEEQ6S8J3 1075 aa10.9□□□□□ -0.66
GYPB-209ENST00000508618 GPHNQ9NQX3 736 aaPredicted RBP10.9□□□□□ -0.66
GYPB-209ENST00000508618 RYDENQ9NUL5 291 aaKnown RBP10.87□□□□□ -0.67
GYPB-209ENST00000508618 ARHGAP33O14559 1287 aa10.85□□□□□ -0.67
GYPB-209ENST00000508618 PLPP6Q8IY26 295 aa10.85□□□□□ -0.67
GYPB-209ENST00000508618 CHGAP10645 457 aaKnown RBP10.82□□□□□ -0.68
GYPB-209ENST00000508618 DSG2Q14126 1118 aa10.82□□□□□ -0.68
GYPB-209ENST00000508618 ADGRD1Q6QNK2 874 aa10.82□□□□□ -0.68
GYPB-209ENST00000508618 AXIN2Q9Y2T1 843 aa10.82□□□□□ -0.68
GYPB-209ENST00000508618 TK2O00142 265 aa10.81□□□□□ -0.68
GYPB-209ENST00000508618 TBC1D12O60347 775 aa10.81□□□□□ -0.68
GYPB-209ENST00000508618 PPP4R3BQ5MIZ7 849 aa10.8□□□□□ -0.68
GYPB-209ENST00000508618 NKX1-1Q15270 411 aaPredicted RBP10.79□□□□□ -0.68
GYPB-209ENST00000508618 CRISPLD2Q9H0B8 497 aa10.78□□□□□ -0.68
GYPB-209ENST00000508618 OXER1Q8TDS5 423 aa10.76□□□□□ -0.69
GYPB-209ENST00000508618 HCSTQ9UBK5 93 aa10.75□□□□□ -0.69
GYPB-209ENST00000508618 HRO43593 1189 aa10.74□□□□□ -0.69
GYPB-209ENST00000508618 PPP1R15BQ5SWA1 713 aa10.71□□□□□ -0.69
GYPB-209ENST00000508618 DMRTA1Q5VZB9 504 aa10.71□□□□□ -0.69
GYPB-209ENST00000508618 KCNH8Q96L42 1107 aa10.71□□□□□ -0.69
GYPB-209ENST00000508618 PSEN2P49810 448 aa10.7□□□□□ -0.7
GYPB-209ENST00000508618 NCKAP5LQ9HCH0 1330 aa10.67□□□□□ -0.7
GYPB-209ENST00000508618 KCNK17Q96T54 332 aa10.66□□□□□ -0.7
GYPB-209ENST00000508618 SLC4A5Q9BY07 1137 aa10.66□□□□□ -0.7
GYPB-209ENST00000508618 BCL2L12Q9HB09 334 aa10.66□□□□□ -0.7
GYPB-209ENST00000508618 PDE4AP27815 886 aa10.65□□□□□ -0.7
GYPB-209ENST00000508618 PLA2G2EQ9NZK7 142 aa10.65□□□□□ -0.7
GYPB-209ENST00000508618 UPF1Q92900 1129 aaKnown RBP eCLIP10.64□□□□□ -0.71
GYPB-209ENST00000508618 GTPBP6O43824 516 aaPredicted RBP10.63□□□□□ -0.71
GYPB-209ENST00000508618 FOSBP53539 338 aa10.63□□□□□ -0.71
GYPB-209ENST00000508618 ZNF454Q8N9F8 522 aa10.63□□□□□ -0.71
GYPB-209ENST00000508618 JPH4Q96JJ6 628 aa10.63□□□□□ -0.71
GYPB-209ENST00000508618 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
GYPB-209ENST00000508618 VPS9D1Q9Y2B5 631 aa10.62□□□□□ -0.71
GYPB-209ENST00000508618 MFSD10Q14728 455 aa10.61□□□□□ -0.71
GYPB-209ENST00000508618 DDX27Q96GQ7 796 aaKnown RBP10.59□□□□□ -0.71
GYPB-209ENST00000508618 PTPREP23469 700 aa10.58□□□□□ -0.72
GYPB-209ENST00000508618 STAC3Q96MF2 364 aa10.58□□□□□ -0.72
GYPB-209ENST00000508618 KCTD12Q96CX2 325 aaKnown RBP10.57□□□□□ -0.72
GYPB-209ENST00000508618 EVI5O60447 810 aa10.56□□□□□ -0.72
GYPB-209ENST00000508618 ZBED2Q9BTP6 218 aa10.55□□□□□ -0.72
GYPB-209ENST00000508618 BHMG1C9JSJ3 638 aaPredicted RBP10.54□□□□□ -0.72
GYPB-209ENST00000508618 ZDHHC16Q969W1 377 aa10.54□□□□□ -0.72
GYPB-209ENST00000508618 LARP6Q9BRS8 491 aaKnown RBP10.54□□□□□ -0.72
GYPB-209ENST00000508618 IFFO2Q5TF58 517 aa10.5□□□□□ -0.73
GYPB-209ENST00000508618 ADAM33Q9BZ11 813 aa10.5□□□□□ -0.73
GYPB-209ENST00000508618 THSD4Q6ZMP0 1018 aa10.49□□□□□ -0.73
GYPB-209ENST00000508618 NBPF3Q9H094 633 aa10.49□□□□□ -0.73
GYPB-209ENST00000508618 PPP1R3GB7ZBB8 358 aa10.48□□□□□ -0.73
GYPB-209ENST00000508618 MAP3K9P80192 1104 aa10.48□□□□□ -0.73
GYPB-209ENST00000508618 EMILIN3Q9NT22 766 aa10.48□□□□□ -0.73
GYPB-209ENST00000508618 MRPL50Q8N5N7 158 aaKnown RBP10.47□□□□□ -0.73
GYPB-209ENST00000508618 FBXW7Q969H0 707 aa10.46□□□□□ -0.73
GYPB-209ENST00000508618 RGS20O76081 388 aa10.44□□□□□ -0.74
GYPB-209ENST00000508618 PCDHGA10Q9Y5H3 936 aa10.44□□□□□ -0.74
GYPB-209ENST00000508618 GOLGA8CPA6NN73 597 aa10.43□□□□□ -0.74
GYPB-209ENST00000508618 PHF14O94880 888 aa10.43□□□□□ -0.74
GYPB-209ENST00000508618 CAMK2BQ13554 666 aa10.43□□□□□ -0.74
GYPB-209ENST00000508618 WNT2BQ93097 391 aa10.43□□□□□ -0.74
GYPB-209ENST00000508618 PTPN5P54829 565 aa10.42□□□□□ -0.74
GYPB-209ENST00000508618 TYW1BQ6NUM6 668 aa10.42□□□□□ -0.74
GYPB-209ENST00000508618 CADPS2Q86UW7 1296 aa10.42□□□□□ -0.74
GYPB-209ENST00000508618 RABGEF1Q9UJ41 708 aa10.42□□□□□ -0.74
GYPB-209ENST00000508618 DCAF8L2P0C7V8 631 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms