RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 SPRYD3Q8NCJ5 442 aa10.24□□□□□ -0.77
HMGB1P44-201ENST00000508597 TMEM121BQ9BXQ6 578 aaPredicted RBP10.24□□□□□ -0.77
HMGB1P44-201ENST00000508597 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.23□□□□□ -0.77
HMGB1P44-201ENST00000508597 TMEM92Q6UXU6 159 aa10.21□□□□□ -0.77
HMGB1P44-201ENST00000508597 L3MBTL3Q96JM7 780 aaPredicted RBP10.21□□□□□ -0.77
HMGB1P44-201ENST00000508597 CADPS2Q86UW7 1296 aa10.2□□□□□ -0.78
HMGB1P44-201ENST00000508597 PLCB2Q00722 1185 aa10.17□□□□□ -0.78
HMGB1P44-201ENST00000508597 TSHZ2Q9NRE2 1034 aa10.16□□□□□ -0.78
HMGB1P44-201ENST00000508597 RYDENQ9NUL5 291 aaKnown RBP10.14□□□□□ -0.79
HMGB1P44-201ENST00000508597 G3V3G9 751 aa10.11□□□□□ -0.79
HMGB1P44-201ENST00000508597 C3orf67Q6ZVT6 689 aa10.11□□□□□ -0.79
HMGB1P44-201ENST00000508597 SLAIN1Q8ND83 568 aa10.11□□□□□ -0.79
HMGB1P44-201ENST00000508597 SCUBE2Q9NQ36 999 aa10.11□□□□□ -0.79
HMGB1P44-201ENST00000508597 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.11□□□□□ -0.79
HMGB1P44-201ENST00000508597 NCKAP5LQ9HCH0 1330 aa10.09□□□□□ -0.79
HMGB1P44-201ENST00000508597 C2orf72A6NCS6 295 aa10.09□□□□□ -0.79
HMGB1P44-201ENST00000508597 MAMSTRQ6ZN01 415 aa10.09□□□□□ -0.79
HMGB1P44-201ENST00000508597 KIF3CO14782 793 aa10.08□□□□□ -0.8
HMGB1P44-201ENST00000508597 CRISPLD2Q9H0B8 497 aa10.05□□□□□ -0.8
HMGB1P44-201ENST00000508597 EIF4G1Q04637 1599 aaKnown RBP10.02□□□□□ -0.81
HMGB1P44-201ENST00000508597 HAP1P54257 671 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P44-201ENST00000508597 GPHNQ9NQX3 736 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P44-201ENST00000508597 PLSCR2Q9NRY7 297 aa10.02□□□□□ -0.81
HMGB1P44-201ENST00000508597 DSG2Q14126 1118 aa10.01□□□□□ -0.81
HMGB1P44-201ENST00000508597 LARP6Q9BRS8 491 aaKnown RBP10□□□□□ -0.81
HMGB1P44-201ENST00000508597 BAZ1AQ9NRL2 1556 aaPredicted RBP10□□□□□ -0.81
HMGB1P44-201ENST00000508597 TMC2Q8TDI7 906 aa9.99□□□□□ -0.81
HMGB1P44-201ENST00000508597 HOXB3P14651 431 aaPredicted RBP9.98□□□□□ -0.81
HMGB1P44-201ENST00000508597 KDM2AQ9Y2K7 1162 aa9.98□□□□□ -0.81
HMGB1P44-201ENST00000508597 PDE4AP27815 886 aa9.97□□□□□ -0.81
HMGB1P44-201ENST00000508597 CECR2Q9BXF3 1484 aa9.97□□□□□ -0.81
HMGB1P44-201ENST00000508597 FOXK1P85037 733 aa9.96□□□□□ -0.82
HMGB1P44-201ENST00000508597 MFSD10Q14728 455 aa9.95□□□□□ -0.82
HMGB1P44-201ENST00000508597 PLPP6Q8IY26 295 aa9.95□□□□□ -0.82
HMGB1P44-201ENST00000508597 SMARCA4P51532 1647 aa9.95□□□□□ -0.82
HMGB1P44-201ENST00000508597 LCE2DQ5TA82 110 aaPredicted RBP9.94□□□□□ -0.82
HMGB1P44-201ENST00000508597 CC2D2AQ9P2K1 1620 aa9.93□□□□□ -0.82
HMGB1P44-201ENST00000508597 PPP1R15BQ5SWA1 713 aa9.93□□□□□ -0.82
HMGB1P44-201ENST00000508597 POTEMA6NI47 508 aa9.92□□□□□ -0.82
HMGB1P44-201ENST00000508597 FAM163AQ96GL9 167 aaPredicted RBP9.91□□□□□ -0.82
HMGB1P44-201ENST00000508597 DDX27Q96GQ7 796 aaKnown RBP9.91□□□□□ -0.82
HMGB1P44-201ENST00000508597 SMARCA2P51531 1590 aa9.89□□□□□ -0.83
HMGB1P44-201ENST00000508597 MROH2BQ7Z745 1585 aa9.89□□□□□ -0.83
HMGB1P44-201ENST00000508597 PEG3Q9GZU2 1588 aa9.89□□□□□ -0.83
HMGB1P44-201ENST00000508597 KHSRPQ92945 711 aaKnown RBP eCLIP9.89□□□□□ -0.83
HMGB1P44-201ENST00000508597 ST18O60284 1047 aa9.88□□□□□ -0.83
HMGB1P44-201ENST00000508597 POTEGQ6S5H5 508 aa9.88□□□□□ -0.83
HMGB1P44-201ENST00000508597 EMILIN3Q9NT22 766 aa9.88□□□□□ -0.83
HMGB1P44-201ENST00000508597 NCAPD3P42695 1498 aa9.87□□□□□ -0.83
HMGB1P44-201ENST00000508597 ATAD2BQ9ULI0 1458 aa9.86□□□□□ -0.83
HMGB1P44-201ENST00000508597 RSF1Q96T23 1441 aaPredicted RBP9.85□□□□□ -0.83
HMGB1P44-201ENST00000508597 GPR153Q6NV75 609 aa9.85□□□□□ -0.83
HMGB1P44-201ENST00000508597 ARSIQ5FYB1 569 aa9.84□□□□□ -0.83
HMGB1P44-201ENST00000508597 UPF1Q92900 1129 aaKnown RBP eCLIP9.84□□□□□ -0.83
HMGB1P44-201ENST00000508597 HMGXB3Q12766 1538 aa9.83□□□□□ -0.84
HMGB1P44-201ENST00000508597 SLC34A2O95436 690 aa9.83□□□□□ -0.84
HMGB1P44-201ENST00000508597 CAMK2BQ13554 666 aa9.83□□□□□ -0.84
HMGB1P44-201ENST00000508597 VSIG10Q8N0Z9 540 aa9.83□□□□□ -0.84
HMGB1P44-201ENST00000508597 DOK7Q18PE1 504 aa9.82□□□□□ -0.84
HMGB1P44-201ENST00000508597 OXER1Q8TDS5 423 aa9.82□□□□□ -0.84
HMGB1P44-201ENST00000508597 PCDHGA4Q9Y5G9 962 aa9.82□□□□□ -0.84
HMGB1P44-201ENST00000508597 SNPHO15079 494 aa9.81□□□□□ -0.84
HMGB1P44-201ENST00000508597 PTCD2Q8WV60 388 aaKnown RBP9.81□□□□□ -0.84
HMGB1P44-201ENST00000508597 MARVELD3Q96A59 401 aa9.81□□□□□ -0.84
HMGB1P44-201ENST00000508597 WDR70Q9NW82 654 aa9.81□□□□□ -0.84
HMGB1P44-201ENST00000508597 E2F4Q16254 413 aa9.8□□□□□ -0.84
HMGB1P44-201ENST00000508597 BAZ1BQ9UIG0 1483 aaKnown RBP9.79□□□□□ -0.84
HMGB1P44-201ENST00000508597 WIZO95785 1651 aa9.79□□□□□ -0.84
HMGB1P44-201ENST00000508597 KDM4FA0A1W2PPD8 638 aa9.78□□□□□ -0.84
HMGB1P44-201ENST00000508597 ZNF710Q8N1W2 664 aa9.78□□□□□ -0.84
HMGB1P44-201ENST00000508597 KCNV2Q8TDN2 545 aa9.78□□□□□ -0.84
HMGB1P44-201ENST00000508597 POTEB3A0JP26 581 aa9.77□□□□□ -0.85
HMGB1P44-201ENST00000508597 DPYSL4O14531 572 aa9.77□□□□□ -0.85
HMGB1P44-201ENST00000508597 NUDT7P0C024 238 aa9.77□□□□□ -0.85
HMGB1P44-201ENST00000508597 HOXB1P14653 301 aaPredicted RBP9.77□□□□□ -0.85
HMGB1P44-201ENST00000508597 POTEBQ6S5H4 581 aa9.77□□□□□ -0.85
HMGB1P44-201ENST00000508597 PCDH10Q9P2E7 1040 aa9.74□□□□□ -0.85
HMGB1P44-201ENST00000508597 TOP2AP11388 1531 aaKnown RBP9.73□□□□□ -0.85
HMGB1P44-201ENST00000508597 ZSWIM6Q9HCJ5 1215 aa9.73□□□□□ -0.85
HMGB1P44-201ENST00000508597 RIMBP2O15034 1052 aa9.72□□□□□ -0.85
HMGB1P44-201ENST00000508597 MAP3K9P80192 1104 aa9.72□□□□□ -0.85
HMGB1P44-201ENST00000508597 EVI5O60447 810 aa9.7□□□□□ -0.86
HMGB1P44-201ENST00000508597 LHX6Q9UPM6 363 aa9.7□□□□□ -0.86
HMGB1P44-201ENST00000508597 SUPT5HO00267 1087 aaKnown RBP9.69□□□□□ -0.86
HMGB1P44-201ENST00000508597 FAM205CA6NFA0 338 aa9.68□□□□□ -0.86
HMGB1P44-201ENST00000508597 EMP3P54852 163 aa9.68□□□□□ -0.86
HMGB1P44-201ENST00000508597 ANO8Q9HCE9 1232 aaPredicted RBP9.68□□□□□ -0.86
HMGB1P44-201ENST00000508597 ARIH1Q9Y4X5 557 aaPredicted RBP9.68□□□□□ -0.86
HMGB1P44-201ENST00000508597 TBC1D12O60347 775 aa9.67□□□□□ -0.86
HMGB1P44-201ENST00000508597 ZNF316A6NFI3 1004 aaPredicted RBP9.65□□□□□ -0.86
HMGB1P44-201ENST00000508597 ARHGEF1Q92888 912 aaKnown RBP9.65□□□□□ -0.86
HMGB1P44-201ENST00000508597 HS3ST6Q96QI5 342 aa9.65□□□□□ -0.86
HMGB1P44-201ENST00000508597 PDIA6Q15084 440 aa9.64□□□□□ -0.87
HMGB1P44-201ENST00000508597 VARS2Q5ST30 1063 aaKnown RBP9.64□□□□□ -0.87
HMGB1P44-201ENST00000508597 ERBB3P21860 1342 aa9.63□□□□□ -0.87
HMGB1P44-201ENST00000508597 SEMA3EO15041 775 aa9.62□□□□□ -0.87
HMGB1P44-201ENST00000508597 BCANQ96GW7 911 aa9.62□□□□□ -0.87
HMGB1P44-201ENST00000508597 MLLT3P42568 568 aaPredicted RBP9.61□□□□□ -0.87
HMGB1P44-201ENST00000508597 PRIM1P49642 420 aaKnown RBP9.61□□□□□ -0.87
HMGB1P44-201ENST00000508597 POTEEQ6S8J3 1075 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms