RNA–Protein interactions for RNA: ENST00000508472.5

DDR1-264, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 836 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-264ENST00000508472 SCAPERQ9BY12 1400 aa25.18■■□□□ 1.62
DDR1-264ENST00000508472 ARHGAP5Q13017 1502 aa25.17■■□□□ 1.62
DDR1-264ENST00000508472 POGZQ7Z3K3 1410 aa25.15■■□□□ 1.62
DDR1-264ENST00000508472 ZFYVE16Q7Z3T8 1539 aa25.15■■□□□ 1.62
DDR1-264ENST00000508472 ADAMTSL3P82987 1691 aa25.13■■□□□ 1.61
DDR1-264ENST00000508472 BCORL1Q5H9F3 1711 aa25.13■■□□□ 1.61
DDR1-264ENST00000508472 ZNF518AQ6AHZ1 1483 aa25.09■■□□□ 1.61
DDR1-264ENST00000508472 PREX2Q70Z35 1606 aa25.08■■□□□ 1.6
DDR1-264ENST00000508472 CDC42BPBQ9Y5S2 1711 aa25.07■■□□□ 1.6
DDR1-264ENST00000508472 HECW2Q9P2P5 1572 aa25.06■■□□□ 1.6
DDR1-264ENST00000508472 PTPRMP28827 1452 aa25.06■■□□□ 1.6
DDR1-264ENST00000508472 YEATS2Q9ULM3 1422 aa25.04■■□□□ 1.6
DDR1-264ENST00000508472 MADDQ8WXG6 1647 aa25.03■■□□□ 1.6
DDR1-264ENST00000508472 ATP10AO60312 1499 aa25.02■■□□□ 1.6
DDR1-264ENST00000508472 MYT1LQ9UL68 1186 aa25.01■■□□□ 1.59
DDR1-264ENST00000508472 CEP162Q5TB80 1403 aa25.01■■□□□ 1.59
DDR1-264ENST00000508472 CDC42BPAQ5VT25 1732 aa25■■□□□ 1.59
DDR1-264ENST00000508472 KDM5CP41229 1560 aa25■■□□□ 1.59
DDR1-264ENST00000508472 C9orf84Q5VXU9 1444 aa24.99■■□□□ 1.59
DDR1-264ENST00000508472 MTUS2Q5JR59 1369 aa24.97■■□□□ 1.59
DDR1-264ENST00000508472 RIMS1Q86UR5 1692 aaKnown RBP24.97■■□□□ 1.59
DDR1-264ENST00000508472 ABCC1P33527 1531 aa24.96■■□□□ 1.59
DDR1-264ENST00000508472 AFAP1Q8N556 730 aa24.96■■□□□ 1.59
DDR1-264ENST00000508472 ITSN2Q9NZM3 1697 aa24.94■■□□□ 1.58
DDR1-264ENST00000508472 MLH3Q9UHC1 1453 aa24.92■■□□□ 1.58
DDR1-264ENST00000508472 FER1L4A9Z1Z3 1794 aa24.91■■□□□ 1.58
DDR1-264ENST00000508472 CCNB3Q8WWL7 1395 aa24.91■■□□□ 1.58
DDR1-264ENST00000508472 GPATCH8Q9UKJ3 1502 aaKnown RBP24.91■■□□□ 1.58
DDR1-264ENST00000508472 SIGLEC1Q9BZZ2 1709 aa24.9■■□□□ 1.58
DDR1-264ENST00000508472 MLECQ14165 292 aa24.9■■□□□ 1.58
DDR1-264ENST00000508472 ZNF777Q9ULD5 760 aaPredicted RBP24.9■■□□□ 1.58
DDR1-264ENST00000508472 EHBP1L1Q8N3D4 1523 aa24.89■■□□□ 1.57
DDR1-264ENST00000508472 PLEKHH2Q8IVE3 1493 aa24.89■■□□□ 1.57
DDR1-264ENST00000508472 REREQ9P2R6 1566 aa24.88■■□□□ 1.57
DDR1-264ENST00000508472 CFDP1Q9UEE9 299 aaPredicted RBP24.88■■□□□ 1.57
DDR1-264ENST00000508472 TRAPPC8Q9Y2L5 1435 aa24.86■■□□□ 1.57
DDR1-264ENST00000508472 DIP2CQ9Y2E4 1556 aa24.86■■□□□ 1.57
DDR1-264ENST00000508472 ARHGEF12Q9NZN5 1544 aa24.86■■□□□ 1.57
DDR1-264ENST00000508472 SAMD9LQ8IVG5 1584 aa24.84■■□□□ 1.57
DDR1-264ENST00000508472 ABCA6Q8N139 1617 aa24.83■■□□□ 1.57
DDR1-264ENST00000508472 KIAA1107Q9UPP5 1409 aa24.83■■□□□ 1.57
DDR1-264ENST00000508472 SYCP2Q9BX26 1530 aa24.81■■□□□ 1.56
DDR1-264ENST00000508472 PLPPR3Q6T4P5 718 aa24.8■■□□□ 1.56
DDR1-264ENST00000508472 KIDINS220Q9ULH0 1771 aa24.8■■□□□ 1.56
DDR1-264ENST00000508472 ESF1Q9H501 851 aaKnown RBP24.79■■□□□ 1.56
DDR1-264ENST00000508472 SPAG9O60271 1321 aaKnown RBP24.79■■□□□ 1.56
DDR1-264ENST00000508472 AGLP35573 1532 aa24.78■■□□□ 1.56
DDR1-264ENST00000508472 LOC105371045A0A1W2PR82 267 aa24.78■■□□□ 1.56
DDR1-264ENST00000508472 HNRNPMP52272 730 aaKnown RBP eCLIP24.77■■□□□ 1.56
DDR1-264ENST00000508472 SUPT6HQ7KZ85 1726 aaKnown RBP24.77■■□□□ 1.56
DDR1-264ENST00000508472 LMTK3Q96Q04 1460 aa24.77■■□□□ 1.56
DDR1-264ENST00000508472 TIAM1Q13009 1591 aa24.76■■□□□ 1.55
DDR1-264ENST00000508472 VPS8Q8N3P4 1428 aa24.76■■□□□ 1.55
DDR1-264ENST00000508472 ATP7AQ04656 1500 aa24.71■■□□□ 1.55
DDR1-264ENST00000508472 INO80Q9ULG1 1556 aaPredicted RBP24.69■■□□□ 1.54
DDR1-264ENST00000508472 NCOA2Q15596 1464 aa24.69■■□□□ 1.54
DDR1-264ENST00000508472 PREX1Q8TCU6 1659 aa24.68■■□□□ 1.54
DDR1-264ENST00000508472 CNTLNQ9NXG0 1405 aa24.68■■□□□ 1.54
DDR1-264ENST00000508472 SETD1BQ9UPS6 1966 aaKnown RBP24.65■■□□□ 1.54
DDR1-264ENST00000508472 RSPH4AQ5TD94 716 aa24.65■■□□□ 1.54
DDR1-264ENST00000508472 MAP3K1Q13233 1512 aa24.65■■□□□ 1.54
DDR1-264ENST00000508472 ADGBQ8N7X0 1667 aa24.64■■□□□ 1.53
DDR1-264ENST00000508472 LRRC9Q6ZRR7 1453 aa24.64■■□□□ 1.53
DDR1-264ENST00000508472 A2MP01023 1474 aa24.63■■□□□ 1.53
DDR1-264ENST00000508472 ZNF644Q9H582 1327 aaPredicted RBP24.62■■□□□ 1.53
DDR1-264ENST00000508472 CEBPAP49715 358 aaPredicted RBP24.62■■□□□ 1.53
DDR1-264ENST00000508472 RTEL1-TNFRSF6BF6WH68 1400 aa24.61■■□□□ 1.53
DDR1-264ENST00000508472 MBD5Q9P267 1494 aa24.61■■□□□ 1.53
DDR1-264ENST00000508472 C3P01024 1663 aa24.61■■□□□ 1.53
DDR1-264ENST00000508472 UHRF1BP1Q6BDS2 1440 aa24.61■■□□□ 1.53
DDR1-264ENST00000508472 HSPA2P54652 639 aa24.6■■□□□ 1.53
DDR1-264ENST00000508472 APLP2Q06481 763 aa24.6■■□□□ 1.53
DDR1-264ENST00000508472 PLXNC1O60486 1568 aa24.59■■□□□ 1.53
DDR1-264ENST00000508472 MROH2AA6NES4 1674 aa24.59■■□□□ 1.53
DDR1-264ENST00000508472 CAMSAP2Q08AD1 1489 aa24.58■■□□□ 1.53
DDR1-264ENST00000508472 CCDC141Q6ZP82 1450 aa24.58■■□□□ 1.53
DDR1-264ENST00000508472 ILDR1Q86SU0 546 aaPredicted RBP24.57■■□□□ 1.52
DDR1-264ENST00000508472 PPP6R1Q9UPN7 881 aa24.56■■□□□ 1.52
DDR1-264ENST00000508472 TSPY4P0CV99 314 aa24.53■■□□□ 1.52
DDR1-264ENST00000508472 TSPY10P0CW01 314 aa24.53■■□□□ 1.52
DDR1-264ENST00000508472 ARHGEF5Q12774 1597 aa24.53■■□□□ 1.52
DDR1-264ENST00000508472 GGT6Q6P531 493 aa24.51■■□□□ 1.51
DDR1-264ENST00000508472 DMRT2Q9Y5R5 561 aa24.5■■□□□ 1.51
DDR1-264ENST00000508472 DHX29Q7Z478 1369 aaKnown RBP24.5■■□□□ 1.51
DDR1-264ENST00000508472 NPATQ14207 1427 aa24.5■■□□□ 1.51
DDR1-264ENST00000508472 ZMYM3Q14202 1370 aa24.49■■□□□ 1.51
DDR1-264ENST00000508472 CLTCQ00610 1675 aaKnown RBP24.49■■□□□ 1.51
DDR1-264ENST00000508472 MIA2Q96PC5 1412 aa24.48■■□□□ 1.51
DDR1-264ENST00000508472 KANK4Q5T7N3 995 aaPredicted RBP24.47■■□□□ 1.51
DDR1-264ENST00000508472 MYOM3Q5VTT5 1437 aa24.46■■□□□ 1.51
DDR1-264ENST00000508472 FAM135AQ9P2D6 1515 aa24.42■■□□□ 1.5
DDR1-264ENST00000508472 KIF3BO15066 747 aa24.41■■□□□ 1.5
DDR1-264ENST00000508472 FBXO41Q8TF61 875 aa24.41■■□□□ 1.5
DDR1-264ENST00000508472 MAST1Q9Y2H9 1570 aa24.4■■□□□ 1.5
DDR1-264ENST00000508472 STRCQ7RTU9 1775 aa24.38■■□□□ 1.49
DDR1-264ENST00000508472 KDM5DQ9BY66 1539 aa24.35■■□□□ 1.49
DDR1-264ENST00000508472 PTPRKQ15262 1439 aa24.35■■□□□ 1.49
DDR1-264ENST00000508472 WASHC2CQ9Y4E1 1318 aa24.34■■□□□ 1.49
DDR1-264ENST00000508472 MYO3AQ8NEV4 1616 aa24.32■■□□□ 1.48
DDR1-264ENST00000508472 ZNF142P52746 1687 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms