RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 ARHGAP5Q13017 1502 aa20.85■□□□□ 0.93
NR1I3-225ENST00000508387 BCORL1Q5H9F3 1711 aa20.85■□□□□ 0.93
NR1I3-225ENST00000508387 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
NR1I3-225ENST00000508387 POGZQ7Z3K3 1410 aa20.85■□□□□ 0.93
NR1I3-225ENST00000508387 SCAPERQ9BY12 1400 aa20.85■□□□□ 0.93
NR1I3-225ENST00000508387 ZFYVE16Q7Z3T8 1539 aa20.83■□□□□ 0.93
NR1I3-225ENST00000508387 PREX2Q70Z35 1606 aa20.83■□□□□ 0.93
NR1I3-225ENST00000508387 MADDQ8WXG6 1647 aa20.82■□□□□ 0.92
NR1I3-225ENST00000508387 CEP162Q5TB80 1403 aa20.81■□□□□ 0.92
NR1I3-225ENST00000508387 CDC42BPAQ5VT25 1732 aa20.81■□□□□ 0.92
NR1I3-225ENST00000508387 HECW2Q9P2P5 1572 aa20.8■□□□□ 0.92
NR1I3-225ENST00000508387 EFCAB2Q5VUJ9 269 aa20.77■□□□□ 0.92
NR1I3-225ENST00000508387 ARID4BQ4LE39 1312 aaPredicted RBP20.77■□□□□ 0.91
NR1I3-225ENST00000508387 PTPRMP28827 1452 aa20.75■□□□□ 0.91
NR1I3-225ENST00000508387 ABCC1P33527 1531 aa20.75■□□□□ 0.91
NR1I3-225ENST00000508387 RIMS1Q86UR5 1692 aaKnown RBP20.75■□□□□ 0.91
NR1I3-225ENST00000508387 KDM5CP41229 1560 aa20.75■□□□□ 0.91
NR1I3-225ENST00000508387 ARHGEF12Q9NZN5 1544 aa20.74■□□□□ 0.91
NR1I3-225ENST00000508387 ITSN2Q9NZM3 1697 aa20.74■□□□□ 0.91
NR1I3-225ENST00000508387 MAGI2Q86UL8 1455 aa20.73■□□□□ 0.91
NR1I3-225ENST00000508387 LOC105371045A0A1W2PR82 267 aa20.72■□□□□ 0.91
NR1I3-225ENST00000508387 ZNF518AQ6AHZ1 1483 aa20.71■□□□□ 0.91
NR1I3-225ENST00000508387 SAMD9LQ8IVG5 1584 aa20.71■□□□□ 0.91
NR1I3-225ENST00000508387 AFAP1Q8N556 730 aa20.7■□□□□ 0.9
NR1I3-225ENST00000508387 ABCA6Q8N139 1617 aa20.7■□□□□ 0.9
NR1I3-225ENST00000508387 TRAPPC8Q9Y2L5 1435 aa20.7■□□□□ 0.9
NR1I3-225ENST00000508387 DIP2CQ9Y2E4 1556 aa20.68■□□□□ 0.9
NR1I3-225ENST00000508387 GPATCH8Q9UKJ3 1502 aaKnown RBP20.68■□□□□ 0.9
NR1I3-225ENST00000508387 C9orf84Q5VXU9 1444 aa20.67■□□□□ 0.9
NR1I3-225ENST00000508387 ATP10AO60312 1499 aa20.66■□□□□ 0.9
NR1I3-225ENST00000508387 FER1L4A9Z1Z3 1794 aa20.66■□□□□ 0.9
NR1I3-225ENST00000508387 SYCP2Q9BX26 1530 aa20.65■□□□□ 0.9
NR1I3-225ENST00000508387 MLECQ14165 292 aa20.65■□□□□ 0.9
NR1I3-225ENST00000508387 TIAM1Q13009 1591 aa20.64■□□□□ 0.9
NR1I3-225ENST00000508387 EHBP1L1Q8N3D4 1523 aa20.64■□□□□ 0.9
NR1I3-225ENST00000508387 MTUS2Q5JR59 1369 aa20.64■□□□□ 0.89
NR1I3-225ENST00000508387 KIDINS220Q9ULH0 1771 aa20.62■□□□□ 0.89
NR1I3-225ENST00000508387 ZNF777Q9ULD5 760 aaPredicted RBP20.62■□□□□ 0.89
NR1I3-225ENST00000508387 PLPPR3Q6T4P5 718 aa20.61■□□□□ 0.89
NR1I3-225ENST00000508387 MLH3Q9UHC1 1453 aa20.6■□□□□ 0.89
NR1I3-225ENST00000508387 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.89
NR1I3-225ENST00000508387 CCNB3Q8WWL7 1395 aa20.58■□□□□ 0.88
NR1I3-225ENST00000508387 REREQ9P2R6 1566 aa20.57■□□□□ 0.88
NR1I3-225ENST00000508387 LMTK3Q96Q04 1460 aa20.56■□□□□ 0.88
NR1I3-225ENST00000508387 VPS8Q8N3P4 1428 aa20.55■□□□□ 0.88
NR1I3-225ENST00000508387 HNRNPMP52272 730 aaKnown RBP eCLIP20.54■□□□□ 0.88
NR1I3-225ENST00000508387 CFDP1Q9UEE9 299 aaPredicted RBP20.53■□□□□ 0.88
NR1I3-225ENST00000508387 INO80Q9ULG1 1556 aaPredicted RBP20.53■□□□□ 0.88
NR1I3-225ENST00000508387 SUPT6HQ7KZ85 1726 aaKnown RBP20.53■□□□□ 0.88
NR1I3-225ENST00000508387 ZNF644Q9H582 1327 aaPredicted RBP20.53■□□□□ 0.88
NR1I3-225ENST00000508387 NCOA2Q15596 1464 aa20.51■□□□□ 0.87
NR1I3-225ENST00000508387 ATP7AQ04656 1500 aa20.51■□□□□ 0.87
NR1I3-225ENST00000508387 KIAA1107Q9UPP5 1409 aa20.49■□□□□ 0.87
NR1I3-225ENST00000508387 AGLP35573 1532 aa20.48■□□□□ 0.87
NR1I3-225ENST00000508387 PLEKHH2Q8IVE3 1493 aa20.48■□□□□ 0.87
NR1I3-225ENST00000508387 CEBPAP49715 358 aaPredicted RBP20.47■□□□□ 0.87
NR1I3-225ENST00000508387 MBD5Q9P267 1494 aa20.46■□□□□ 0.87
NR1I3-225ENST00000508387 SPAG9O60271 1321 aaKnown RBP20.46■□□□□ 0.87
NR1I3-225ENST00000508387 LRRC9Q6ZRR7 1453 aa20.45■□□□□ 0.86
NR1I3-225ENST00000508387 PLXNC1O60486 1568 aa20.45■□□□□ 0.86
NR1I3-225ENST00000508387 C3P01024 1663 aa20.45■□□□□ 0.86
NR1I3-225ENST00000508387 HSPA2P54652 639 aa20.44■□□□□ 0.86
NR1I3-225ENST00000508387 CAMSAP2Q08AD1 1489 aa20.43■□□□□ 0.86
NR1I3-225ENST00000508387 KANK4Q5T7N3 995 aaPredicted RBP20.41■□□□□ 0.86
NR1I3-225ENST00000508387 PREX1Q8TCU6 1659 aa20.41■□□□□ 0.86
NR1I3-225ENST00000508387 ADGBQ8N7X0 1667 aa20.4■□□□□ 0.86
NR1I3-225ENST00000508387 A2MP01023 1474 aa20.39■□□□□ 0.85
NR1I3-225ENST00000508387 MAP3K1Q13233 1512 aa20.37■□□□□ 0.85
NR1I3-225ENST00000508387 CCDC141Q6ZP82 1450 aa20.36■□□□□ 0.85
NR1I3-225ENST00000508387 CLTCQ00610 1675 aaKnown RBP20.35■□□□□ 0.85
NR1I3-225ENST00000508387 MROH2AA6NES4 1674 aa20.33■□□□□ 0.85
NR1I3-225ENST00000508387 ILDR1Q86SU0 546 aaPredicted RBP20.32■□□□□ 0.84
NR1I3-225ENST00000508387 ARHGEF5Q12774 1597 aa20.32■□□□□ 0.84
NR1I3-225ENST00000508387 RTEL1-TNFRSF6BF6WH68 1400 aa20.3■□□□□ 0.84
NR1I3-225ENST00000508387 MYOM3Q5VTT5 1437 aa20.28■□□□□ 0.84
NR1I3-225ENST00000508387 UHRF1BP1Q6BDS2 1440 aa20.28■□□□□ 0.84
NR1I3-225ENST00000508387 CNTLNQ9NXG0 1405 aa20.28■□□□□ 0.84
NR1I3-225ENST00000508387 ESF1Q9H501 851 aaKnown RBP20.27■□□□□ 0.84
NR1I3-225ENST00000508387 STRCQ7RTU9 1775 aa20.26■□□□□ 0.83
NR1I3-225ENST00000508387 GGT6Q6P531 493 aa20.26■□□□□ 0.83
NR1I3-225ENST00000508387 ZMYM3Q14202 1370 aa20.24■□□□□ 0.83
NR1I3-225ENST00000508387 DHX29Q7Z478 1369 aaKnown RBP20.24■□□□□ 0.83
NR1I3-225ENST00000508387 MAST1Q9Y2H9 1570 aa20.23■□□□□ 0.83
NR1I3-225ENST00000508387 MYO3AQ8NEV4 1616 aa20.22■□□□□ 0.83
NR1I3-225ENST00000508387 MIA2Q96PC5 1412 aa20.21■□□□□ 0.83
NR1I3-225ENST00000508387 PTPN23Q9H3S7 1636 aa20.21■□□□□ 0.83
NR1I3-225ENST00000508387 CROCC2H7BZ55 1655 aa20.2■□□□□ 0.82
NR1I3-225ENST00000508387 SETD1BQ9UPS6 1966 aaKnown RBP20.2■□□□□ 0.82
NR1I3-225ENST00000508387 NPATQ14207 1427 aa20.19■□□□□ 0.82
NR1I3-225ENST00000508387 PTPRKQ15262 1439 aa20.19■□□□□ 0.82
NR1I3-225ENST00000508387 KIF3BO15066 747 aa20.18■□□□□ 0.82
NR1I3-225ENST00000508387 KDM5DQ9BY66 1539 aa20.17■□□□□ 0.82
NR1I3-225ENST00000508387 ZNF142P52746 1687 aaPredicted RBP20.16■□□□□ 0.82
NR1I3-225ENST00000508387 RSPH4AQ5TD94 716 aa20.16■□□□□ 0.82
NR1I3-225ENST00000508387 APLP2Q06481 763 aa20.15■□□□□ 0.82
NR1I3-225ENST00000508387 CAMSAP1Q5T5Y3 1602 aa20.14■□□□□ 0.81
NR1I3-225ENST00000508387 RNF17Q9BXT8 1623 aaKnown RBP20.14■□□□□ 0.81
NR1I3-225ENST00000508387 FGD6Q6ZV73 1430 aa20.14■□□□□ 0.81
NR1I3-225ENST00000508387 TSPY4P0CV99 314 aa20.14■□□□□ 0.81
NR1I3-225ENST00000508387 TSPY10P0CW01 314 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms