RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 CADPS2Q86UW7 1296 aa13.69□□□□□ -0.22
DHFR-204ENST00000508282 C2orf72A6NCS6 295 aa13.68□□□□□ -0.22
DHFR-204ENST00000508282 PLCB2Q00722 1185 aa13.68□□□□□ -0.22
DHFR-204ENST00000508282 TMC2Q8TDI7 906 aa13.66□□□□□ -0.22
DHFR-204ENST00000508282 NCKAP5LQ9HCH0 1330 aa13.64□□□□□ -0.23
DHFR-204ENST00000508282 CRISPLD2Q9H0B8 497 aa13.64□□□□□ -0.23
DHFR-204ENST00000508282 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
DHFR-204ENST00000508282 TSHZ2Q9NRE2 1034 aa13.59□□□□□ -0.23
DHFR-204ENST00000508282 PDE4AP27815 886 aa13.58□□□□□ -0.24
DHFR-204ENST00000508282 HOXB3P14651 431 aaPredicted RBP13.57□□□□□ -0.24
DHFR-204ENST00000508282 SNPHO15079 494 aa13.56□□□□□ -0.24
DHFR-204ENST00000508282 FOXK1P85037 733 aa13.56□□□□□ -0.24
DHFR-204ENST00000508282 DSG2Q14126 1118 aa13.56□□□□□ -0.24
DHFR-204ENST00000508282 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
DHFR-204ENST00000508282 FAM163AQ96GL9 167 aaPredicted RBP13.53□□□□□ -0.24
DHFR-204ENST00000508282 MFSD10Q14728 455 aa13.52□□□□□ -0.25
DHFR-204ENST00000508282 PLPP6Q8IY26 295 aa13.52□□□□□ -0.25
DHFR-204ENST00000508282 PPP1R15BQ5SWA1 713 aa13.51□□□□□ -0.25
DHFR-204ENST00000508282 LCE2DQ5TA82 110 aaPredicted RBP13.51□□□□□ -0.25
DHFR-204ENST00000508282 DOK7Q18PE1 504 aa13.5□□□□□ -0.25
DHFR-204ENST00000508282 DDX27Q96GQ7 796 aaKnown RBP13.5□□□□□ -0.25
DHFR-204ENST00000508282 ST18O60284 1047 aa13.48□□□□□ -0.25
DHFR-204ENST00000508282 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.25
DHFR-204ENST00000508282 SLC34A2O95436 690 aa13.44□□□□□ -0.26
DHFR-204ENST00000508282 ZNF710Q8N1W2 664 aa13.44□□□□□ -0.26
DHFR-204ENST00000508282 RIMBP2O15034 1052 aa13.41□□□□□ -0.26
DHFR-204ENST00000508282 ZSWIM6Q9HCJ5 1215 aa13.41□□□□□ -0.26
DHFR-204ENST00000508282 GPR153Q6NV75 609 aa13.4□□□□□ -0.26
DHFR-204ENST00000508282 HOXB1P14653 301 aaPredicted RBP13.38□□□□□ -0.27
DHFR-204ENST00000508282 PTCD2Q8WV60 388 aaKnown RBP13.38□□□□□ -0.27
DHFR-204ENST00000508282 ARSIQ5FYB1 569 aa13.37□□□□□ -0.27
DHFR-204ENST00000508282 PCDHGA4Q9Y5G9 962 aa13.37□□□□□ -0.27
DHFR-204ENST00000508282 CAMK2BQ13554 666 aa13.35□□□□□ -0.27
DHFR-204ENST00000508282 OXER1Q8TDS5 423 aa13.35□□□□□ -0.27
DHFR-204ENST00000508282 KHSRPQ92945 711 aaKnown RBP eCLIP13.35□□□□□ -0.27
DHFR-204ENST00000508282 EMILIN3Q9NT22 766 aa13.35□□□□□ -0.27
DHFR-204ENST00000508282 WDR70Q9NW82 654 aa13.35□□□□□ -0.27
DHFR-204ENST00000508282 MARVELD3Q96A59 401 aa13.34□□□□□ -0.27
DHFR-204ENST00000508282 UPF1Q92900 1129 aaKnown RBP eCLIP13.33□□□□□ -0.28
DHFR-204ENST00000508282 E2F4Q16254 413 aa13.3□□□□□ -0.28
DHFR-204ENST00000508282 KDM2AQ9Y2K7 1162 aa13.3□□□□□ -0.28
DHFR-204ENST00000508282 NUDT7P0C024 238 aa13.28□□□□□ -0.28
DHFR-204ENST00000508282 EMP3P54852 163 aa13.28□□□□□ -0.28
DHFR-204ENST00000508282 KDM4FA0A1W2PPD8 638 aa13.27□□□□□ -0.29
DHFR-204ENST00000508282 POTEMA6NI47 508 aa13.27□□□□□ -0.29
DHFR-204ENST00000508282 TBC1D12O60347 775 aa13.27□□□□□ -0.29
DHFR-204ENST00000508282 POTEGQ6S5H5 508 aa13.27□□□□□ -0.29
DHFR-204ENST00000508282 VSIG10Q8N0Z9 540 aa13.24□□□□□ -0.29
DHFR-204ENST00000508282 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
DHFR-204ENST00000508282 DPYSL4O14531 572 aa13.22□□□□□ -0.29
DHFR-204ENST00000508282 FAM205CA6NFA0 338 aa13.21□□□□□ -0.29
DHFR-204ENST00000508282 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
DHFR-204ENST00000508282 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
DHFR-204ENST00000508282 ERBB3P21860 1342 aa13.19□□□□□ -0.3
DHFR-204ENST00000508282 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
DHFR-204ENST00000508282 EVI5O60447 810 aa13.19□□□□□ -0.3
DHFR-204ENST00000508282 KCNV2Q8TDN2 545 aa13.19□□□□□ -0.3
DHFR-204ENST00000508282 LHX6Q9UPM6 363 aa13.19□□□□□ -0.3
DHFR-204ENST00000508282 ARIH1Q9Y4X5 557 aaPredicted RBP13.19□□□□□ -0.3
DHFR-204ENST00000508282 HS3ST6Q96QI5 342 aa13.18□□□□□ -0.3
DHFR-204ENST00000508282 VARS2Q5ST30 1063 aaKnown RBP13.16□□□□□ -0.3
DHFR-204ENST00000508282 ANO8Q9HCE9 1232 aaPredicted RBP13.16□□□□□ -0.3
DHFR-204ENST00000508282 PDIA6Q15084 440 aa13.12□□□□□ -0.31
DHFR-204ENST00000508282 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
DHFR-204ENST00000508282 P3H3Q8IVL6 736 aa13.11□□□□□ -0.31
DHFR-204ENST00000508282 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
DHFR-204ENST00000508282 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
DHFR-204ENST00000508282 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
DHFR-204ENST00000508282 FOSBP53539 338 aa13.05□□□□□ -0.32
DHFR-204ENST00000508282 ZNF687Q8N1G0 1237 aa13.05□□□□□ -0.32
DHFR-204ENST00000508282 ZNF454Q8N9F8 522 aa13.04□□□□□ -0.32
DHFR-204ENST00000508282 JPH4Q96JJ6 628 aa13.04□□□□□ -0.32
DHFR-204ENST00000508282 PTGER2P43116 358 aa13.03□□□□□ -0.32
DHFR-204ENST00000508282 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.33
DHFR-204ENST00000508282 SLC24A1O60721 1099 aa13.01□□□□□ -0.33
DHFR-204ENST00000508282 DDX12PQ92771 950 aa13.01□□□□□ -0.33
DHFR-204ENST00000508282 PCDHGA10Q9Y5H3 936 aa13.01□□□□□ -0.33
DHFR-204ENST00000508282 PHF14O94880 888 aa12.99□□□□□ -0.33
DHFR-204ENST00000508282 POTEEQ6S8J3 1075 aa12.99□□□□□ -0.33
DHFR-204ENST00000508282 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
DHFR-204ENST00000508282 KRTAP3-3Q9BYR6 98 aa12.98□□□□□ -0.33
DHFR-204ENST00000508282 KRTAP3-2Q9BYR7 98 aa12.98□□□□□ -0.33
DHFR-204ENST00000508282 ZDHHC16Q969W1 377 aa12.96□□□□□ -0.33
DHFR-204ENST00000508282 ADAM33Q9BZ11 813 aa12.95□□□□□ -0.34
DHFR-204ENST00000508282 GRXCR2A6NFK2 248 aa12.94□□□□□ -0.34
DHFR-204ENST00000508282 SEMA3EO15041 775 aa12.94□□□□□ -0.34
DHFR-204ENST00000508282 TYW1BQ6NUM6 668 aa12.94□□□□□ -0.34
DHFR-204ENST00000508282 AXIN2Q9Y2T1 843 aa12.94□□□□□ -0.34
DHFR-204ENST00000508282 PBX2P40425 430 aa12.93□□□□□ -0.34
DHFR-204ENST00000508282 MLLT3P42568 568 aaPredicted RBP12.93□□□□□ -0.34
DHFR-204ENST00000508282 EPAS1Q99814 870 aa12.93□□□□□ -0.34
DHFR-204ENST00000508282 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
DHFR-204ENST00000508282 NBR1Q14596 966 aa12.92□□□□□ -0.34
DHFR-204ENST00000508282 FBXW7Q969H0 707 aa12.92□□□□□ -0.34
DHFR-204ENST00000508282 ARHGAP33O14559 1287 aa12.91□□□□□ -0.34
DHFR-204ENST00000508282 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
DHFR-204ENST00000508282 OSBPP22059 807 aa12.89□□□□□ -0.35
DHFR-204ENST00000508282 PSEN2P49810 448 aa12.89□□□□□ -0.35
DHFR-204ENST00000508282 KCNK17Q96T54 332 aa12.89□□□□□ -0.35
DHFR-204ENST00000508282 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms