RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 ADAMTSL3P82987 1691 aa23.16■■□□□ 1.3
RAB28-205ENST00000508274 ARHGAP5Q13017 1502 aa23.15■■□□□ 1.3
RAB28-205ENST00000508274 BCORL1Q5H9F3 1711 aa23.15■■□□□ 1.3
RAB28-205ENST00000508274 CDC42BPBQ9Y5S2 1711 aa23.15■■□□□ 1.3
RAB28-205ENST00000508274 POGZQ7Z3K3 1410 aa23.15■■□□□ 1.3
RAB28-205ENST00000508274 YEATS2Q9ULM3 1422 aa23.14■■□□□ 1.3
RAB28-205ENST00000508274 ZFYVE16Q7Z3T8 1539 aa23.13■■□□□ 1.29
RAB28-205ENST00000508274 SIGLEC1Q9BZZ2 1709 aa23.13■■□□□ 1.29
RAB28-205ENST00000508274 EFCAB2Q5VUJ9 269 aa23.13■■□□□ 1.29
RAB28-205ENST00000508274 PREX2Q70Z35 1606 aa23.11■■□□□ 1.29
RAB28-205ENST00000508274 ARID4BQ4LE39 1312 aaPredicted RBP23.1■■□□□ 1.29
RAB28-205ENST00000508274 HECW2Q9P2P5 1572 aa23.09■■□□□ 1.29
RAB28-205ENST00000508274 MADDQ8WXG6 1647 aa23.09■■□□□ 1.29
RAB28-205ENST00000508274 CDC42BPAQ5VT25 1732 aa23.08■■□□□ 1.29
RAB28-205ENST00000508274 CEP162Q5TB80 1403 aa23.08■■□□□ 1.29
RAB28-205ENST00000508274 MAGI2Q86UL8 1455 aa23.08■■□□□ 1.28
RAB28-205ENST00000508274 PTPRMP28827 1452 aa23.05■■□□□ 1.28
RAB28-205ENST00000508274 ZNF518AQ6AHZ1 1483 aa23.04■■□□□ 1.28
RAB28-205ENST00000508274 KDM5CP41229 1560 aa23.03■■□□□ 1.28
RAB28-205ENST00000508274 ABCC1P33527 1531 aa23.02■■□□□ 1.28
RAB28-205ENST00000508274 RIMS1Q86UR5 1692 aaKnown RBP23.02■■□□□ 1.27
RAB28-205ENST00000508274 AFAP1Q8N556 730 aa23.01■■□□□ 1.27
RAB28-205ENST00000508274 ARHGEF12Q9NZN5 1544 aa23■■□□□ 1.27
RAB28-205ENST00000508274 ITSN2Q9NZM3 1697 aa23■■□□□ 1.27
RAB28-205ENST00000508274 LOC105371045A0A1W2PR82 267 aa22.97■■□□□ 1.27
RAB28-205ENST00000508274 ATP10AO60312 1499 aa22.97■■□□□ 1.27
RAB28-205ENST00000508274 C9orf84Q5VXU9 1444 aa22.96■■□□□ 1.27
RAB28-205ENST00000508274 TRAPPC8Q9Y2L5 1435 aa22.96■■□□□ 1.27
RAB28-205ENST00000508274 SAMD9LQ8IVG5 1584 aa22.96■■□□□ 1.27
RAB28-205ENST00000508274 GPATCH8Q9UKJ3 1502 aaKnown RBP22.95■■□□□ 1.26
RAB28-205ENST00000508274 DIP2CQ9Y2E4 1556 aa22.94■■□□□ 1.26
RAB28-205ENST00000508274 ABCA6Q8N139 1617 aa22.94■■□□□ 1.26
RAB28-205ENST00000508274 MTUS2Q5JR59 1369 aa22.94■■□□□ 1.26
RAB28-205ENST00000508274 FER1L4A9Z1Z3 1794 aa22.93■■□□□ 1.26
RAB28-205ENST00000508274 MLECQ14165 292 aa22.93■■□□□ 1.26
RAB28-205ENST00000508274 SYCP2Q9BX26 1530 aa22.91■■□□□ 1.26
RAB28-205ENST00000508274 MYT1LQ9UL68 1186 aa22.91■■□□□ 1.26
RAB28-205ENST00000508274 ZNF777Q9ULD5 760 aaPredicted RBP22.91■■□□□ 1.26
RAB28-205ENST00000508274 EHBP1L1Q8N3D4 1523 aa22.9■■□□□ 1.26
RAB28-205ENST00000508274 MLH3Q9UHC1 1453 aa22.9■■□□□ 1.26
RAB28-205ENST00000508274 KIDINS220Q9ULH0 1771 aa22.89■■□□□ 1.25
RAB28-205ENST00000508274 TIAM1Q13009 1591 aa22.88■■□□□ 1.25
RAB28-205ENST00000508274 CCNB3Q8WWL7 1395 aa22.87■■□□□ 1.25
RAB28-205ENST00000508274 PLPPR3Q6T4P5 718 aa22.86■■□□□ 1.25
RAB28-205ENST00000508274 REREQ9P2R6 1566 aa22.86■■□□□ 1.25
RAB28-205ENST00000508274 CFDP1Q9UEE9 299 aaPredicted RBP22.84■■□□□ 1.25
RAB28-205ENST00000508274 HNRNPMP52272 730 aaKnown RBP eCLIP22.83■■□□□ 1.252e-6■■■■□ 25.1
RAB28-205ENST00000508274 LMTK3Q96Q04 1460 aa22.82■■□□□ 1.24
RAB28-205ENST00000508274 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
RAB28-205ENST00000508274 KIAA1107Q9UPP5 1409 aa22.79■■□□□ 1.24
RAB28-205ENST00000508274 SUPT6HQ7KZ85 1726 aaKnown RBP22.79■■□□□ 1.24
RAB28-205ENST00000508274 PLEKHH2Q8IVE3 1493 aa22.78■■□□□ 1.24
RAB28-205ENST00000508274 ZNF644Q9H582 1327 aaPredicted RBP22.78■■□□□ 1.24
RAB28-205ENST00000508274 AGLP35573 1532 aa22.77■■□□□ 1.24
RAB28-205ENST00000508274 INO80Q9ULG1 1556 aaPredicted RBP22.77■■□□□ 1.24
RAB28-205ENST00000508274 NCOA2Q15596 1464 aa22.76■■□□□ 1.23
RAB28-205ENST00000508274 SPAG9O60271 1321 aaKnown RBP22.76■■□□□ 1.23
RAB28-205ENST00000508274 ATP7AQ04656 1500 aa22.76■■□□□ 1.23
RAB28-205ENST00000508274 CEBPAP49715 358 aaPredicted RBP22.72■■□□□ 1.23
RAB28-205ENST00000508274 MBD5Q9P267 1494 aa22.71■■□□□ 1.23
RAB28-205ENST00000508274 LRRC9Q6ZRR7 1453 aa22.71■■□□□ 1.23
RAB28-205ENST00000508274 HSPA2P54652 639 aa22.69■■□□□ 1.22
RAB28-205ENST00000508274 C3P01024 1663 aa22.69■■□□□ 1.22
RAB28-205ENST00000508274 PLXNC1O60486 1568 aa22.69■■□□□ 1.22
RAB28-205ENST00000508274 PREX1Q8TCU6 1659 aa22.68■■□□□ 1.22
RAB28-205ENST00000508274 CAMSAP2Q08AD1 1489 aa22.67■■□□□ 1.22
RAB28-205ENST00000508274 A2MP01023 1474 aa22.66■■□□□ 1.22
RAB28-205ENST00000508274 ADGBQ8N7X0 1667 aa22.65■■□□□ 1.22
RAB28-205ENST00000508274 MAP3K1Q13233 1512 aa22.65■■□□□ 1.22
RAB28-205ENST00000508274 KANK4Q5T7N3 995 aaPredicted RBP22.63■■□□□ 1.21
RAB28-205ENST00000508274 CCDC141Q6ZP82 1450 aa22.61■■□□□ 1.21
RAB28-205ENST00000508274 ESF1Q9H501 851 aaKnown RBP22.6■■□□□ 1.21
RAB28-205ENST00000508274 ILDR1Q86SU0 546 aaPredicted RBP22.59■■□□□ 1.21
RAB28-205ENST00000508274 SETD1BQ9UPS6 1966 aaKnown RBP22.59■■□□□ 1.21
RAB28-205ENST00000508274 MROH2AA6NES4 1674 aa22.59■■□□□ 1.21
RAB28-205ENST00000508274 RTEL1-TNFRSF6BF6WH68 1400 aa22.58■■□□□ 1.21
RAB28-205ENST00000508274 CNTLNQ9NXG0 1405 aa22.58■■□□□ 1.21
RAB28-205ENST00000508274 CLTCQ00610 1675 aaKnown RBP22.58■■□□□ 1.21
RAB28-205ENST00000508274 ARHGEF5Q12774 1597 aa22.57■■□□□ 1.2
RAB28-205ENST00000508274 UHRF1BP1Q6BDS2 1440 aa22.56■■□□□ 1.2
RAB28-205ENST00000508274 GGT6Q6P531 493 aa22.53■■□□□ 1.2
RAB28-205ENST00000508274 MYOM3Q5VTT5 1437 aa22.52■■□□□ 1.2
RAB28-205ENST00000508274 DHX29Q7Z478 1369 aaKnown RBP22.51■■□□□ 1.19
RAB28-205ENST00000508274 ZMYM3Q14202 1370 aa22.5■■□□□ 1.19
RAB28-205ENST00000508274 STRCQ7RTU9 1775 aa22.5■■□□□ 1.19
RAB28-205ENST00000508274 RSPH4AQ5TD94 716 aa22.5■■□□□ 1.19
RAB28-205ENST00000508274 MIA2Q96PC5 1412 aa22.48■■□□□ 1.19
RAB28-205ENST00000508274 NPATQ14207 1427 aa22.46■■□□□ 1.19
RAB28-205ENST00000508274 MAST1Q9Y2H9 1570 aa22.46■■□□□ 1.19
RAB28-205ENST00000508274 APLP2Q06481 763 aa22.46■■□□□ 1.19
RAB28-205ENST00000508274 KIF3BO15066 747 aa22.44■■□□□ 1.18
RAB28-205ENST00000508274 TSPY4P0CV99 314 aa22.44■■□□□ 1.18
RAB28-205ENST00000508274 TSPY10P0CW01 314 aa22.44■■□□□ 1.18
RAB28-205ENST00000508274 MYO3AQ8NEV4 1616 aa22.43■■□□□ 1.18
RAB28-205ENST00000508274 PTPN23Q9H3S7 1636 aa22.42■■□□□ 1.18
RAB28-205ENST00000508274 PTPRKQ15262 1439 aa22.42■■□□□ 1.18
RAB28-205ENST00000508274 PPP6R1Q9UPN7 881 aa22.4■■□□□ 1.18
RAB28-205ENST00000508274 CROCC2H7BZ55 1655 aa22.39■■□□□ 1.18
RAB28-205ENST00000508274 KDM5DQ9BY66 1539 aa22.39■■□□□ 1.17
RAB28-205ENST00000508274 ZNF142P52746 1687 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms