RNA–Protein interactions for RNA: ENST00000508086.1

CCSER1-206, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-206ENST00000508086 TMEM92Q6UXU6 159 aa13.78□□□□□ -0.2
CCSER1-206ENST00000508086 ZNF687Q8N1G0 1237 aa13.76□□□□□ -0.21
CCSER1-206ENST00000508086 ARSIQ5FYB1 569 aa13.72□□□□□ -0.21
CCSER1-206ENST00000508086 GPR153Q6NV75 609 aa13.72□□□□□ -0.21
CCSER1-206ENST00000508086 MS4A4AQ96JQ5 239 aa13.72□□□□□ -0.21
CCSER1-206ENST00000508086 NLRP6P59044 892 aa13.71□□□□□ -0.21
CCSER1-206ENST00000508086 ANKRD13DQ6ZTN6 518 aa13.71□□□□□ -0.21
CCSER1-206ENST00000508086 TAOK2Q9UL54 1235 aa13.71□□□□□ -0.21
CCSER1-206ENST00000508086 RNF25Q96BH1 459 aaPredicted RBP13.7□□□□□ -0.22
CCSER1-206ENST00000508086 PTGER2P43116 358 aa13.66□□□□□ -0.22
CCSER1-206ENST00000508086 BCL11BQ9C0K0 894 aaPredicted RBP13.64□□□□□ -0.23
CCSER1-206ENST00000508086 STK24Q9Y6E0 443 aa13.64□□□□□ -0.23
CCSER1-206ENST00000508086 ZNF316A6NFI3 1004 aaPredicted RBP13.62□□□□□ -0.23
CCSER1-206ENST00000508086 KHSRPQ92945 711 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCSER1-206ENST00000508086 STK25O00506 426 aa13.55□□□□□ -0.24
CCSER1-206ENST00000508086 LSM11P83369 360 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCSER1-206ENST00000508086 FBXO22Q8NEZ5 403 aa13.53□□□□□ -0.24
CCSER1-206ENST00000508086 NUDT7P0C024 238 aa13.52□□□□□ -0.25
CCSER1-206ENST00000508086 C2orf72A6NCS6 295 aa13.5□□□□□ -0.25
CCSER1-206ENST00000508086 TMC2Q8TDI7 906 aa13.48□□□□□ -0.25
CCSER1-206ENST00000508086 MFRPQ9BY79 579 aa13.48□□□□□ -0.25
CCSER1-206ENST00000508086 ECM2O94769 699 aaPredicted RBP13.47□□□□□ -0.25
CCSER1-206ENST00000508086 PBX2P40425 430 aa13.46□□□□□ -0.25
CCSER1-206ENST00000508086 LHX6Q9UPM6 363 aa13.45□□□□□ -0.26
CCSER1-206ENST00000508086 AXIN2Q9Y2T1 843 aa13.44□□□□□ -0.26
CCSER1-206ENST00000508086 PCDHGA4Q9Y5G9 962 aa13.43□□□□□ -0.26
CCSER1-206ENST00000508086 KIF3CO14782 793 aa13.41□□□□□ -0.26
CCSER1-206ENST00000508086 PKD2Q13563 968 aa13.36□□□□□ -0.27
CCSER1-206ENST00000508086 SLC34A2O95436 690 aa13.35□□□□□ -0.27
CCSER1-206ENST00000508086 PLA2G2EQ9NZK7 142 aa13.35□□□□□ -0.27
CCSER1-206ENST00000508086 HCSTQ9UBK5 93 aa13.35□□□□□ -0.27
CCSER1-206ENST00000508086 PSDA5PKW4 1024 aaPredicted RBP13.32□□□□□ -0.28
CCSER1-206ENST00000508086 ARHGAP33O14559 1287 aa13.32□□□□□ -0.28
CCSER1-206ENST00000508086 STAC3Q96MF2 364 aa13.32□□□□□ -0.28
CCSER1-206ENST00000508086 ADGRD1Q6QNK2 874 aa13.3□□□□□ -0.28
CCSER1-206ENST00000508086 POTEEQ6S8J3 1075 aa13.3□□□□□ -0.28
CCSER1-206ENST00000508086 RGL2O15211 777 aa13.27□□□□□ -0.29
CCSER1-206ENST00000508086 PPP1R37O75864 691 aa13.23□□□□□ -0.29
CCSER1-206ENST00000508086 TBC1D12O60347 775 aa13.22□□□□□ -0.29
CCSER1-206ENST00000508086 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
CCSER1-206ENST00000508086 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.29
CCSER1-206ENST00000508086 PSEN2P49810 448 aa13.2□□□□□ -0.3
CCSER1-206ENST00000508086 PLPP6Q8IY26 295 aa13.19□□□□□ -0.3
CCSER1-206ENST00000508086 TK2O00142 265 aa13.18□□□□□ -0.3
CCSER1-206ENST00000508086 PTCD2Q8WV60 388 aaKnown RBP13.18□□□□□ -0.3
CCSER1-206ENST00000508086 KCTD12Q96CX2 325 aaKnown RBP13.18□□□□□ -0.3
CCSER1-206ENST00000508086 DMRTA1Q5VZB9 504 aa13.17□□□□□ -0.3
CCSER1-206ENST00000508086 FOXK1P85037 733 aa13.13□□□□□ -0.31
CCSER1-206ENST00000508086 KCNK17Q96T54 332 aa13.12□□□□□ -0.31
CCSER1-206ENST00000508086 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
CCSER1-206ENST00000508086 HRO43593 1189 aa13.1□□□□□ -0.31
CCSER1-206ENST00000508086 DSG2Q14126 1118 aa13.08□□□□□ -0.32
CCSER1-206ENST00000508086 KDM4FA0A1W2PPD8 638 aa13.07□□□□□ -0.32
CCSER1-206ENST00000508086 PTPN5P54829 565 aa13.07□□□□□ -0.32
CCSER1-206ENST00000508086 UPF1Q92900 1129 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCSER1-206ENST00000508086 GOLGA8CPA6NN73 597 aa13.02□□□□□ -0.33
CCSER1-206ENST00000508086 ZNF454Q8N9F8 522 aa13.02□□□□□ -0.33
CCSER1-206ENST00000508086 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
CCSER1-206ENST00000508086 HS6ST3Q8IZP7 471 aa12.99□□□□□ -0.33
CCSER1-206ENST00000508086 VPS9D1Q9Y2B5 631 aa12.99□□□□□ -0.33
CCSER1-206ENST00000508086 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
CCSER1-206ENST00000508086 PTPREP23469 700 aa12.93□□□□□ -0.34
CCSER1-206ENST00000508086 OXER1Q8TDS5 423 aa12.92□□□□□ -0.34
CCSER1-206ENST00000508086 RYDENQ9NUL5 291 aaKnown RBP12.92□□□□□ -0.34
CCSER1-206ENST00000508086 MRPL50Q8N5N7 158 aaKnown RBP12.91□□□□□ -0.34
CCSER1-206ENST00000508086 BCL2L12Q9HB09 334 aa12.91□□□□□ -0.34
CCSER1-206ENST00000508086 WNT2BQ93097 391 aa12.9□□□□□ -0.34
CCSER1-206ENST00000508086 RTN4Q9NQC3 1192 aaKnown RBP12.9□□□□□ -0.34
CCSER1-206ENST00000508086 PPP1R15BQ5SWA1 713 aa12.89□□□□□ -0.35
CCSER1-206ENST00000508086 THSD4Q6ZMP0 1018 aa12.86□□□□□ -0.35
CCSER1-206ENST00000508086 SLC4A5Q9BY07 1137 aa12.86□□□□□ -0.35
CCSER1-206ENST00000508086 IRX2Q9BZI1 471 aaPredicted RBP12.85□□□□□ -0.35
CCSER1-206ENST00000508086 PDE4AP27815 886 aa12.84□□□□□ -0.35
CCSER1-206ENST00000508086 FOSBP53539 338 aa12.84□□□□□ -0.35
CCSER1-206ENST00000508086 NBPF3Q9H094 633 aa12.84□□□□□ -0.35
CCSER1-206ENST00000508086 DNAJC5Q9H3Z4 198 aa12.84□□□□□ -0.35
CCSER1-206ENST00000508086 RGS20O76081 388 aa12.83□□□□□ -0.36
CCSER1-206ENST00000508086 EVI5O60447 810 aa12.81□□□□□ -0.36
CCSER1-206ENST00000508086 ZDHHC16Q969W1 377 aa12.81□□□□□ -0.36
CCSER1-206ENST00000508086 ZBED2Q9BTP6 218 aa12.81□□□□□ -0.36
CCSER1-206ENST00000508086 CRISPLD2Q9H0B8 497 aa12.81□□□□□ -0.36
CCSER1-206ENST00000508086 BHMG1C9JSJ3 638 aaPredicted RBP12.8□□□□□ -0.36
CCSER1-206ENST00000508086 JPH4Q96JJ6 628 aa12.8□□□□□ -0.36
CCSER1-206ENST00000508086 MAP3K9P80192 1104 aa12.79□□□□□ -0.36
CCSER1-206ENST00000508086 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
CCSER1-206ENST00000508086 DCAF8L2P0C7V8 631 aa12.77□□□□□ -0.37
CCSER1-206ENST00000508086 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.37
CCSER1-206ENST00000508086 A0A0G2JS52 829 aa12.76□□□□□ -0.37
CCSER1-206ENST00000508086 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
CCSER1-206ENST00000508086 ADAM33Q9BZ11 813 aa12.76□□□□□ -0.37
CCSER1-206ENST00000508086 ANO8Q9HCE9 1232 aaPredicted RBP12.74□□□□□ -0.37
CCSER1-206ENST00000508086 ANKK1Q8NFD2 765 aa12.73□□□□□ -0.37
CCSER1-206ENST00000508086 DDX27Q96GQ7 796 aaKnown RBP12.73□□□□□ -0.37
CCSER1-206ENST00000508086 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.37
CCSER1-206ENST00000508086 PPP1R3GB7ZBB8 358 aa12.67□□□□□ -0.38
CCSER1-206ENST00000508086 RABGEF1Q9UJ41 708 aa12.66□□□□□ -0.38
CCSER1-206ENST00000508086 PROX2Q3B8N5 592 aa12.65□□□□□ -0.38
CCSER1-206ENST00000508086 BCAMP50895 628 aa12.62□□□□□ -0.39
CCSER1-206ENST00000508086 PCDHGA10Q9Y5H3 936 aa12.62□□□□□ -0.39
CCSER1-206ENST00000508086 FBXW7Q969H0 707 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms