RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 BCORL1Q5H9F3 1711 aa33.81■■■■□ 3
CLDND1-216ENST00000507944 CCDC18Q5T9S5 1454 aa33.79■■■■□ 3
CLDND1-216ENST00000507944 POGZQ7Z3K3 1410 aa33.79■■■■□ 3
CLDND1-216ENST00000507944 MAGI2Q86UL8 1455 aa33.78■■■■□ 3
CLDND1-216ENST00000507944 PTPRMP28827 1452 aa33.77■■■■□ 3
CLDND1-216ENST00000507944 ZFYVE16Q7Z3T8 1539 aa33.77■■■■□ 3
CLDND1-216ENST00000507944 YEATS2Q9ULM3 1422 aa33.77■■■■□ 3
CLDND1-216ENST00000507944 ARHGAP5Q13017 1502 aa33.74■■■□□ 2.99
CLDND1-216ENST00000507944 FYCO1Q9BQS8 1478 aa33.72■■■□□ 2.99
CLDND1-216ENST00000507944 MADDQ8WXG6 1647 aa33.7■■■□□ 2.99
CLDND1-216ENST00000507944 CDC42BPBQ9Y5S2 1711 aa33.65■■■□□ 2.98
CLDND1-216ENST00000507944 AFAP1Q8N556 730 aa33.64■■■□□ 2.98
CLDND1-216ENST00000507944 ZNF518AQ6AHZ1 1483 aa33.63■■■□□ 2.97
CLDND1-216ENST00000507944 SIGLEC1Q9BZZ2 1709 aa33.62■■■□□ 2.97
CLDND1-216ENST00000507944 ATP10AO60312 1499 aa33.62■■■□□ 2.97
CLDND1-216ENST00000507944 RIMS1Q86UR5 1692 aaKnown RBP33.6■■■□□ 2.97
CLDND1-216ENST00000507944 MLECQ14165 292 aa33.59■■■□□ 2.97
CLDND1-216ENST00000507944 PREX2Q70Z35 1606 aa33.59■■■□□ 2.97
CLDND1-216ENST00000507944 MYT1LQ9UL68 1186 aa33.57■■■□□ 2.96
CLDND1-216ENST00000507944 C9orf84Q5VXU9 1444 aa33.55■■■□□ 2.96
CLDND1-216ENST00000507944 KDM5CP41229 1560 aa33.55■■■□□ 2.96
CLDND1-216ENST00000507944 CDC42BPAQ5VT25 1732 aa33.52■■■□□ 2.96
CLDND1-216ENST00000507944 PLPPR3Q6T4P5 718 aa33.5■■■□□ 2.95
CLDND1-216ENST00000507944 ARHGEF12Q9NZN5 1544 aa33.49■■■□□ 2.95
CLDND1-216ENST00000507944 TRAPPC8Q9Y2L5 1435 aa33.49■■■□□ 2.95
CLDND1-216ENST00000507944 ABCC1P33527 1531 aa33.48■■■□□ 2.95
CLDND1-216ENST00000507944 ZNF777Q9ULD5 760 aaPredicted RBP33.47■■■□□ 2.95
CLDND1-216ENST00000507944 MLH3Q9UHC1 1453 aa33.46■■■□□ 2.95
CLDND1-216ENST00000507944 CEP162Q5TB80 1403 aa33.45■■■□□ 2.95
CLDND1-216ENST00000507944 FER1L4A9Z1Z3 1794 aa33.44■■■□□ 2.94
CLDND1-216ENST00000507944 GPATCH8Q9UKJ3 1502 aaKnown RBP33.44■■■□□ 2.94
CLDND1-216ENST00000507944 ITSN2Q9NZM3 1697 aa33.44■■■□□ 2.94
CLDND1-216ENST00000507944 MTUS2Q5JR59 1369 aa33.43■■■□□ 2.94
CLDND1-216ENST00000507944 DIP2CQ9Y2E4 1556 aa33.42■■■□□ 2.94
CLDND1-216ENST00000507944 LMTK3Q96Q04 1460 aa33.4■■■□□ 2.94
CLDND1-216ENST00000507944 ILDR1Q86SU0 546 aaPredicted RBP33.38■■■□□ 2.93
CLDND1-216ENST00000507944 CFDP1Q9UEE9 299 aaPredicted RBP33.38■■■□□ 2.93
CLDND1-216ENST00000507944 CCNB3Q8WWL7 1395 aa33.37■■■□□ 2.93
CLDND1-216ENST00000507944 ABCA6Q8N139 1617 aa33.37■■■□□ 2.93
CLDND1-216ENST00000507944 SAMD9LQ8IVG5 1584 aa33.36■■■□□ 2.93
CLDND1-216ENST00000507944 REREQ9P2R6 1566 aa33.35■■■□□ 2.93
CLDND1-216ENST00000507944 HNRNPMP52272 730 aaKnown RBP eCLIP33.35■■■□□ 2.93
CLDND1-216ENST00000507944 KIDINS220Q9ULH0 1771 aa33.32■■■□□ 2.92
CLDND1-216ENST00000507944 LOC105371045A0A1W2PR82 267 aa33.31■■■□□ 2.92
CLDND1-216ENST00000507944 SYCP2Q9BX26 1530 aa33.31■■■□□ 2.92
CLDND1-216ENST00000507944 CEBPAP49715 358 aaPredicted RBP33.29■■■□□ 2.92
CLDND1-216ENST00000507944 HSPA2P54652 639 aa33.29■■■□□ 2.92
CLDND1-216ENST00000507944 KIAA1107Q9UPP5 1409 aa33.28■■■□□ 2.92
CLDND1-216ENST00000507944 PLEKHH2Q8IVE3 1493 aa33.28■■■□□ 2.92
CLDND1-216ENST00000507944 AGLP35573 1532 aa33.28■■■□□ 2.92
CLDND1-216ENST00000507944 SPAG9O60271 1321 aaKnown RBP33.28■■■□□ 2.92
CLDND1-216ENST00000507944 EHBP1L1Q8N3D4 1523 aa33.27■■■□□ 2.92
CLDND1-216ENST00000507944 ESF1Q9H501 851 aaKnown RBP33.2■■■□□ 2.91
CLDND1-216ENST00000507944 TIAM1Q13009 1591 aa33.2■■■□□ 2.91
CLDND1-216ENST00000507944 ZNF644Q9H582 1327 aaPredicted RBP33.19■■■□□ 2.9
CLDND1-216ENST00000507944 SETD1BQ9UPS6 1966 aaKnown RBP33.18■■■□□ 2.9
CLDND1-216ENST00000507944 ATP7AQ04656 1500 aa33.15■■■□□ 2.9
CLDND1-216ENST00000507944 PREX1Q8TCU6 1659 aa33.13■■■□□ 2.89
CLDND1-216ENST00000507944 VPS8Q8N3P4 1428 aa33.11■■■□□ 2.89
CLDND1-216ENST00000507944 INO80Q9ULG1 1556 aaPredicted RBP33.1■■■□□ 2.89
CLDND1-216ENST00000507944 NCOA2Q15596 1464 aa33.09■■■□□ 2.89
CLDND1-216ENST00000507944 SUPT6HQ7KZ85 1726 aaKnown RBP33.08■■■□□ 2.89
CLDND1-216ENST00000507944 C3P01024 1663 aa33.08■■■□□ 2.89
CLDND1-216ENST00000507944 MBD5Q9P267 1494 aa33.08■■■□□ 2.89
CLDND1-216ENST00000507944 CNTLNQ9NXG0 1405 aa33.08■■■□□ 2.89
CLDND1-216ENST00000507944 A2MP01023 1474 aa33.06■■■□□ 2.88
CLDND1-216ENST00000507944 UHRF1BP1Q6BDS2 1440 aa33.05■■■□□ 2.88
CLDND1-216ENST00000507944 PLXNC1O60486 1568 aa33.01■■■□□ 2.88
CLDND1-216ENST00000507944 FBXO41Q8TF61 875 aa33■■■□□ 2.87
CLDND1-216ENST00000507944 RTEL1-TNFRSF6BF6WH68 1400 aa32.99■■■□□ 2.87
CLDND1-216ENST00000507944 LRRC9Q6ZRR7 1453 aa32.98■■■□□ 2.87
CLDND1-216ENST00000507944 ADGBQ8N7X0 1667 aa32.97■■■□□ 2.87
CLDND1-216ENST00000507944 RSPH4AQ5TD94 716 aa32.97■■■□□ 2.87
CLDND1-216ENST00000507944 GGT6Q6P531 493 aa32.97■■■□□ 2.87
CLDND1-216ENST00000507944 ZMYM3Q14202 1370 aa32.96■■■□□ 2.87
CLDND1-216ENST00000507944 CAMSAP2Q08AD1 1489 aa32.96■■■□□ 2.87
CLDND1-216ENST00000507944 MROH2AA6NES4 1674 aa32.94■■■□□ 2.86
CLDND1-216ENST00000507944 CCDC141Q6ZP82 1450 aa32.93■■■□□ 2.86
CLDND1-216ENST00000507944 KANK4Q5T7N3 995 aaPredicted RBP32.92■■■□□ 2.86
CLDND1-216ENST00000507944 MAP3K1Q13233 1512 aa32.91■■■□□ 2.86
CLDND1-216ENST00000507944 PPP6R1Q9UPN7 881 aa32.9■■■□□ 2.86
CLDND1-216ENST00000507944 DMRT2Q9Y5R5 561 aa32.9■■■□□ 2.86
CLDND1-216ENST00000507944 DHX29Q7Z478 1369 aaKnown RBP32.9■■■□□ 2.86
CLDND1-216ENST00000507944 STRCQ7RTU9 1775 aa32.88■■■□□ 2.85
CLDND1-216ENST00000507944 CLTCQ00610 1675 aaKnown RBP32.88■■■□□ 2.85
CLDND1-216ENST00000507944 NPATQ14207 1427 aa32.88■■■□□ 2.85
CLDND1-216ENST00000507944 TSPY4P0CV99 314 aa32.85■■■□□ 2.85
CLDND1-216ENST00000507944 TSPY10P0CW01 314 aa32.85■■■□□ 2.85
CLDND1-216ENST00000507944 ARHGEF5Q12774 1597 aa32.83■■■□□ 2.85
CLDND1-216ENST00000507944 KIF3BO15066 747 aa32.81■■■□□ 2.84
CLDND1-216ENST00000507944 CERKQ8TCT0 537 aa32.8■■■□□ 2.84
CLDND1-216ENST00000507944 PTPRKQ15262 1439 aa32.77■■■□□ 2.84
CLDND1-216ENST00000507944 APLP2Q06481 763 aa32.77■■■□□ 2.84
CLDND1-216ENST00000507944 MYOM3Q5VTT5 1437 aa32.75■■■□□ 2.83
CLDND1-216ENST00000507944 MIA2Q96PC5 1412 aa32.74■■■□□ 2.83
CLDND1-216ENST00000507944 PTPRTO14522 1441 aa32.73■■■□□ 2.83
CLDND1-216ENST00000507944 NCOA1Q15788 1441 aa32.72■■■□□ 2.83
CLDND1-216ENST00000507944 CAMSAP1Q5T5Y3 1602 aa32.68■■■□□ 2.82
CLDND1-216ENST00000507944 WASHC2CQ9Y4E1 1318 aa32.67■■■□□ 2.82
CLDND1-216ENST00000507944 MAST1Q9Y2H9 1570 aa32.66■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms