RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 PREX2Q70Z35 1606 aa26.31■■□□□ 1.8
HOXC4-203ENST00000507650 POGZQ7Z3K3 1410 aa26.31■■□□□ 1.8
HOXC4-203ENST00000507650 YEATS2Q9ULM3 1422 aa26.31■■□□□ 1.8
HOXC4-203ENST00000507650 CDC42BPAQ5VT25 1732 aa26.3■■□□□ 1.8
HOXC4-203ENST00000507650 HECW2Q9P2P5 1572 aa26.29■■□□□ 1.8
HOXC4-203ENST00000507650 MADDQ8WXG6 1647 aa26.28■■□□□ 1.8
HOXC4-203ENST00000507650 SCAPERQ9BY12 1400 aa26.28■■□□□ 1.8
HOXC4-203ENST00000507650 ZFYVE16Q7Z3T8 1539 aa26.28■■□□□ 1.8
HOXC4-203ENST00000507650 ARHGAP5Q13017 1502 aa26.26■■□□□ 1.79
HOXC4-203ENST00000507650 CDK11AQ9UQ88 783 aaPredicted RBP26.26■■□□□ 1.79
HOXC4-203ENST00000507650 KDM5CP41229 1560 aa26.22■■□□□ 1.79
HOXC4-203ENST00000507650 PTPRMP28827 1452 aa26.21■■□□□ 1.79
HOXC4-203ENST00000507650 MAGI2Q86UL8 1455 aa26.21■■□□□ 1.79
HOXC4-203ENST00000507650 RIMS1Q86UR5 1692 aaKnown RBP26.2■■□□□ 1.78
HOXC4-203ENST00000507650 ITSN2Q9NZM3 1697 aa26.2■■□□□ 1.78
HOXC4-203ENST00000507650 EFCAB2Q5VUJ9 269 aa26.19■■□□□ 1.78
HOXC4-203ENST00000507650 ABCC1P33527 1531 aa26.19■■□□□ 1.78
HOXC4-203ENST00000507650 ARHGEF12Q9NZN5 1544 aa26.19■■□□□ 1.78
HOXC4-203ENST00000507650 CEP162Q5TB80 1403 aa26.17■■□□□ 1.78
HOXC4-203ENST00000507650 ZNF518AQ6AHZ1 1483 aa26.13■■□□□ 1.77
HOXC4-203ENST00000507650 SAMD9LQ8IVG5 1584 aa26.12■■□□□ 1.77
HOXC4-203ENST00000507650 ABCA6Q8N139 1617 aa26.12■■□□□ 1.77
HOXC4-203ENST00000507650 FER1L4A9Z1Z3 1794 aa26.12■■□□□ 1.77
HOXC4-203ENST00000507650 DIP2CQ9Y2E4 1556 aa26.12■■□□□ 1.77
HOXC4-203ENST00000507650 ARID4BQ4LE39 1312 aaPredicted RBP26.11■■□□□ 1.77
HOXC4-203ENST00000507650 TRAPPC8Q9Y2L5 1435 aa26.09■■□□□ 1.77
HOXC4-203ENST00000507650 AFAP1Q8N556 730 aa26.09■■□□□ 1.77
HOXC4-203ENST00000507650 ATP10AO60312 1499 aa26.09■■□□□ 1.77
HOXC4-203ENST00000507650 GPATCH8Q9UKJ3 1502 aaKnown RBP26.09■■□□□ 1.77
HOXC4-203ENST00000507650 KIDINS220Q9ULH0 1771 aa26.07■■□□□ 1.76
HOXC4-203ENST00000507650 C9orf84Q5VXU9 1444 aa26.06■■□□□ 1.76
HOXC4-203ENST00000507650 TIAM1Q13009 1591 aa26.03■■□□□ 1.76
HOXC4-203ENST00000507650 MLH3Q9UHC1 1453 aa26.03■■□□□ 1.76
HOXC4-203ENST00000507650 SYCP2Q9BX26 1530 aa26.03■■□□□ 1.76
HOXC4-203ENST00000507650 REREQ9P2R6 1566 aa26.03■■□□□ 1.76
HOXC4-203ENST00000507650 LOC105371045A0A1W2PR82 267 aa26.02■■□□□ 1.76
HOXC4-203ENST00000507650 EHBP1L1Q8N3D4 1523 aa26■■□□□ 1.75
HOXC4-203ENST00000507650 LMTK3Q96Q04 1460 aa25.98■■□□□ 1.75
HOXC4-203ENST00000507650 MTUS2Q5JR59 1369 aa25.95■■□□□ 1.75
HOXC4-203ENST00000507650 MLECQ14165 292 aa25.95■■□□□ 1.74
HOXC4-203ENST00000507650 INO80Q9ULG1 1556 aaPredicted RBP25.93■■□□□ 1.74
HOXC4-203ENST00000507650 CCNB3Q8WWL7 1395 aa25.91■■□□□ 1.74
HOXC4-203ENST00000507650 AGLP35573 1532 aa25.9■■□□□ 1.74
HOXC4-203ENST00000507650 ZNF777Q9ULD5 760 aaPredicted RBP25.9■■□□□ 1.74
HOXC4-203ENST00000507650 SUPT6HQ7KZ85 1726 aaKnown RBP25.88■■□□□ 1.73
HOXC4-203ENST00000507650 VPS8Q8N3P4 1428 aa25.88■■□□□ 1.73
HOXC4-203ENST00000507650 KIAA1107Q9UPP5 1409 aa25.88■■□□□ 1.73
HOXC4-203ENST00000507650 HNRNPMP52272 730 aaKnown RBP eCLIP25.87■■□□□ 1.73
HOXC4-203ENST00000507650 ATP7AQ04656 1500 aa25.86■■□□□ 1.73
HOXC4-203ENST00000507650 C3P01024 1663 aa25.86■■□□□ 1.73
HOXC4-203ENST00000507650 CFDP1Q9UEE9 299 aaPredicted RBP25.85■■□□□ 1.73
HOXC4-203ENST00000507650 ZNF644Q9H582 1327 aaPredicted RBP25.85■■□□□ 1.73
HOXC4-203ENST00000507650 PLXNC1O60486 1568 aa25.84■■□□□ 1.73
HOXC4-203ENST00000507650 NCOA2Q15596 1464 aa25.84■■□□□ 1.73
HOXC4-203ENST00000507650 PLEKHH2Q8IVE3 1493 aa25.84■■□□□ 1.73
HOXC4-203ENST00000507650 PLPPR3Q6T4P5 718 aa25.83■■□□□ 1.73
HOXC4-203ENST00000507650 MBD5Q9P267 1494 aa25.83■■□□□ 1.73
HOXC4-203ENST00000507650 MYT1LQ9UL68 1186 aa25.82■■□□□ 1.72
HOXC4-203ENST00000507650 PREX1Q8TCU6 1659 aa25.82■■□□□ 1.72
HOXC4-203ENST00000507650 ADGBQ8N7X0 1667 aa25.79■■□□□ 1.72
HOXC4-203ENST00000507650 CEBPAP49715 358 aaPredicted RBP25.78■■□□□ 1.72
HOXC4-203ENST00000507650 SPAG9O60271 1321 aaKnown RBP25.77■■□□□ 1.72
HOXC4-203ENST00000507650 LRRC9Q6ZRR7 1453 aa25.77■■□□□ 1.72
HOXC4-203ENST00000507650 CAMSAP2Q08AD1 1489 aa25.74■■□□□ 1.71
HOXC4-203ENST00000507650 HSPA2P54652 639 aa25.74■■□□□ 1.71
HOXC4-203ENST00000507650 MROH2AA6NES4 1674 aa25.73■■□□□ 1.71
HOXC4-203ENST00000507650 MAP3K1Q13233 1512 aa25.73■■□□□ 1.71
HOXC4-203ENST00000507650 A2MP01023 1474 aa25.72■■□□□ 1.71
HOXC4-203ENST00000507650 SETD1BQ9UPS6 1966 aaKnown RBP25.71■■□□□ 1.71
HOXC4-203ENST00000507650 CLTCQ00610 1675 aaKnown RBP25.7■■□□□ 1.7
HOXC4-203ENST00000507650 KANK4Q5T7N3 995 aaPredicted RBP25.69■■□□□ 1.7
HOXC4-203ENST00000507650 STRCQ7RTU9 1775 aa25.68■■□□□ 1.7
HOXC4-203ENST00000507650 ILDR1Q86SU0 546 aaPredicted RBP25.67■■□□□ 1.7
HOXC4-203ENST00000507650 ARHGEF5Q12774 1597 aa25.66■■□□□ 1.7
HOXC4-203ENST00000507650 CCDC141Q6ZP82 1450 aa25.66■■□□□ 1.7
HOXC4-203ENST00000507650 RTEL1-TNFRSF6BF6WH68 1400 aa25.63■■□□□ 1.69
HOXC4-203ENST00000507650 CNTLNQ9NXG0 1405 aa25.61■■□□□ 1.69
HOXC4-203ENST00000507650 UHRF1BP1Q6BDS2 1440 aa25.57■■□□□ 1.68
HOXC4-203ENST00000507650 MAST1Q9Y2H9 1570 aa25.56■■□□□ 1.68
HOXC4-203ENST00000507650 MYOM3Q5VTT5 1437 aa25.55■■□□□ 1.68
HOXC4-203ENST00000507650 ZMYM3Q14202 1370 aa25.54■■□□□ 1.68
HOXC4-203ENST00000507650 DHX29Q7Z478 1369 aaKnown RBP25.54■■□□□ 1.68
HOXC4-203ENST00000507650 MYO3AQ8NEV4 1616 aa25.53■■□□□ 1.68
HOXC4-203ENST00000507650 CROCC2H7BZ55 1655 aa25.52■■□□□ 1.68
HOXC4-203ENST00000507650 ZNF142P52746 1687 aaPredicted RBP25.52■■□□□ 1.68
HOXC4-203ENST00000507650 NPATQ14207 1427 aa25.51■■□□□ 1.67
HOXC4-203ENST00000507650 PTPRKQ15262 1439 aa25.49■■□□□ 1.67
HOXC4-203ENST00000507650 MIA2Q96PC5 1412 aa25.49■■□□□ 1.67
HOXC4-203ENST00000507650 GGT6Q6P531 493 aa25.49■■□□□ 1.67
HOXC4-203ENST00000507650 ESF1Q9H501 851 aaKnown RBP25.49■■□□□ 1.67
HOXC4-203ENST00000507650 PTPN23Q9H3S7 1636 aa25.47■■□□□ 1.67
HOXC4-203ENST00000507650 RNF17Q9BXT8 1623 aaKnown RBP25.46■■□□□ 1.67
HOXC4-203ENST00000507650 RSPH4AQ5TD94 716 aa25.45■■□□□ 1.66
HOXC4-203ENST00000507650 MROH1Q8NDA8 1641 aa25.44■■□□□ 1.66
HOXC4-203ENST00000507650 KDM5DQ9BY66 1539 aa25.42■■□□□ 1.66
HOXC4-203ENST00000507650 CAMSAP1Q5T5Y3 1602 aa25.41■■□□□ 1.66
HOXC4-203ENST00000507650 EIF2AK4Q9P2K8 1649 aaKnown RBP25.41■■□□□ 1.66
HOXC4-203ENST00000507650 CEP170BQ9Y4F5 1589 aaPredicted RBP25.41■■□□□ 1.66
HOXC4-203ENST00000507650 NCOA1Q15788 1441 aa25.41■■□□□ 1.66
HOXC4-203ENST00000507650 KIF3BO15066 747 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms