RNA–Protein interactions for RNA: ENST00000507313.5

LINC00939-202, long intergenic non-protein coding RNA 939, humanhuman

TSL 2 BASIC

Gene LINC00939, Length 2,819 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-202ENST00000507313 COL17A1Q9UMD9 1497 aaPredicted RBP13.43□□□□□ -0.26
LINC00939-202ENST00000507313 LRRIQ1Q96JM4 1722 aa13.42□□□□□ -0.26
LINC00939-202ENST00000507313 HNRNPMP52272 730 aaKnown RBP eCLIP13.42□□□□□ -0.26
LINC00939-202ENST00000507313 AFAP1Q8N556 730 aa13.42□□□□□ -0.26
LINC00939-202ENST00000507313 LRRC9Q6ZRR7 1453 aa13.42□□□□□ -0.26
LINC00939-202ENST00000507313 KIF14Q15058 1648 aa13.41□□□□□ -0.26
LINC00939-202ENST00000507313 FANCAO15360 1455 aa13.4□□□□□ -0.26
LINC00939-202ENST00000507313 TEX14Q8IWB6 1497 aa13.4□□□□□ -0.26
LINC00939-202ENST00000507313 AKNAQ7Z591 1439 aa13.39□□□□□ -0.27
LINC00939-202ENST00000507313 TIAM1Q13009 1591 aa13.39□□□□□ -0.27
LINC00939-202ENST00000507313 TTC37Q6PGP7 1564 aa13.38□□□□□ -0.27
LINC00939-202ENST00000507313 GPATCH8Q9UKJ3 1502 aaKnown RBP13.38□□□□□ -0.27
LINC00939-202ENST00000507313 ABCA9Q8IUA7 1624 aa13.38□□□□□ -0.27
LINC00939-202ENST00000507313 SCAPERQ9BY12 1400 aa13.38□□□□□ -0.27
LINC00939-202ENST00000507313 NCOA2Q15596 1464 aa13.38□□□□□ -0.27
LINC00939-202ENST00000507313 MAP3K4Q9Y6R4 1608 aa13.37□□□□□ -0.27
LINC00939-202ENST00000507313 ARHGAP5Q13017 1502 aa13.36□□□□□ -0.27
LINC00939-202ENST00000507313 PHLDB1Q86UU1 1377 aa13.34□□□□□ -0.27
LINC00939-202ENST00000507313 FAM50AQ14320 339 aaKnown RBP13.34□□□□□ -0.27
LINC00939-202ENST00000507313 MAP3K1Q13233 1512 aa13.34□□□□□ -0.27
LINC00939-202ENST00000507313 EHBP1L1Q8N3D4 1523 aa13.34□□□□□ -0.27
LINC00939-202ENST00000507313 CFAP43Q8NDM7 1665 aa13.33□□□□□ -0.28
LINC00939-202ENST00000507313 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.28
LINC00939-202ENST00000507313 ADGRL1O94910 1474 aa13.33□□□□□ -0.28
LINC00939-202ENST00000507313 NEO1Q92859 1461 aa13.33□□□□□ -0.28
LINC00939-202ENST00000507313 PPRC1Q5VV67 1664 aaKnown RBP13.32□□□□□ -0.28
LINC00939-202ENST00000507313 ACIN1Q9UKV3 1341 aaKnown RBP13.32□□□□□ -0.28
LINC00939-202ENST00000507313 DENND4BO75064 1496 aaPredicted RBP13.32□□□□□ -0.28
LINC00939-202ENST00000507313 NEUROD1Q13562 356 aa13.31□□□□□ -0.28
LINC00939-202ENST00000507313 KDM6BO15054 1643 aa13.31□□□□□ -0.28
LINC00939-202ENST00000507313 ITGAEP38570 1179 aa13.31□□□□□ -0.28
LINC00939-202ENST00000507313 ARID4BQ4LE39 1312 aaPredicted RBP13.29□□□□□ -0.28
LINC00939-202ENST00000507313 TRAPPC8Q9Y2L5 1435 aa13.29□□□□□ -0.28
LINC00939-202ENST00000507313 TSPY4P0CV99 314 aa13.29□□□□□ -0.28
LINC00939-202ENST00000507313 TSPY10P0CW01 314 aa13.29□□□□□ -0.28
LINC00939-202ENST00000507313 ARAP3Q8WWN8 1544 aa13.29□□□□□ -0.28
LINC00939-202ENST00000507313 CHIC2Q9UKJ5 165 aa13.28□□□□□ -0.28
LINC00939-202ENST00000507313 SPAG9O60271 1321 aaKnown RBP13.28□□□□□ -0.28
LINC00939-202ENST00000507313 MYOM3Q5VTT5 1437 aa13.27□□□□□ -0.28
LINC00939-202ENST00000507313 ARHGEF12Q9NZN5 1544 aa13.27□□□□□ -0.28
LINC00939-202ENST00000507313 MLECQ14165 292 aa13.26□□□□□ -0.29
LINC00939-202ENST00000507313 SUPT6HQ7KZ85 1726 aaKnown RBP13.25□□□□□ -0.29
LINC00939-202ENST00000507313 RSPH4AQ5TD94 716 aa13.24□□□□□ -0.29
LINC00939-202ENST00000507313 MYO5CQ9NQX4 1742 aa13.23□□□□□ -0.29
LINC00939-202ENST00000507313 POGZQ7Z3K3 1410 aa13.23□□□□□ -0.29
LINC00939-202ENST00000507313 YEATS2Q9ULM3 1422 aa13.23□□□□□ -0.29
LINC00939-202ENST00000507313 KIAA1107Q9UPP5 1409 aa13.23□□□□□ -0.29
LINC00939-202ENST00000507313 CDC42BPBQ9Y5S2 1711 aa13.23□□□□□ -0.29
LINC00939-202ENST00000507313 FGD6Q6ZV73 1430 aa13.23□□□□□ -0.29
LINC00939-202ENST00000507313 DIEXFQ68CQ4 756 aaKnown RBP13.22□□□□□ -0.29
LINC00939-202ENST00000507313 MIA2Q96PC5 1412 aa13.22□□□□□ -0.29
LINC00939-202ENST00000507313 GTF3C3Q9Y5Q9 886 aa13.22□□□□□ -0.29
LINC00939-202ENST00000507313 SYCP2Q9BX26 1530 aa13.21□□□□□ -0.29
LINC00939-202ENST00000507313 CDC42BPAQ5VT25 1732 aa13.21□□□□□ -0.29
LINC00939-202ENST00000507313 ZNF518AQ6AHZ1 1483 aa13.21□□□□□ -0.29
LINC00939-202ENST00000507313 PREX2Q70Z35 1606 aa13.21□□□□□ -0.29
LINC00939-202ENST00000507313 MBD5Q9P267 1494 aa13.21□□□□□ -0.3
LINC00939-202ENST00000507313 RRP7BPQ9NSQ0 103 aa13.21□□□□□ -0.3
LINC00939-202ENST00000507313 CAMSAP2Q08AD1 1489 aa13.2□□□□□ -0.3
LINC00939-202ENST00000507313 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
LINC00939-202ENST00000507313 PLEKHH2Q8IVE3 1493 aa13.2□□□□□ -0.3
LINC00939-202ENST00000507313 ABCC1P33527 1531 aa13.18□□□□□ -0.3
LINC00939-202ENST00000507313 GGT6Q6P531 493 aa13.17□□□□□ -0.3
LINC00939-202ENST00000507313 KDM4FA0A1W2PPD8 638 aa13.17□□□□□ -0.3
LINC00939-202ENST00000507313 CENPBP07199 599 aaPredicted RBP13.17□□□□□ -0.3
LINC00939-202ENST00000507313 CFAP74Q9C0B2 1584 aa13.16□□□□□ -0.3
LINC00939-202ENST00000507313 ABCC5O15440 1437 aa13.15□□□□□ -0.3
LINC00939-202ENST00000507313 KIF3BO15066 747 aa13.14□□□□□ -0.31
LINC00939-202ENST00000507313 FRMPD1Q5SYB0 1578 aa13.14□□□□□ -0.31
LINC00939-202ENST00000507313 CCDC141Q6ZP82 1450 aa13.14□□□□□ -0.31
LINC00939-202ENST00000507313 MLH3Q9UHC1 1453 aa13.14□□□□□ -0.31
LINC00939-202ENST00000507313 ATP10AO60312 1499 aa13.13□□□□□ -0.31
LINC00939-202ENST00000507313 MAGI2Q86UL8 1455 aa13.13□□□□□ -0.31
LINC00939-202ENST00000507313 ITSN2Q9NZM3 1697 aa13.12□□□□□ -0.31
LINC00939-202ENST00000507313 ARXQ96QS3 562 aa13.12□□□□□ -0.31
LINC00939-202ENST00000507313 ZFYVE16Q7Z3T8 1539 aa13.11□□□□□ -0.31
LINC00939-202ENST00000507313 C9orf84Q5VXU9 1444 aa13.11□□□□□ -0.31
LINC00939-202ENST00000507313 PTPN23Q9H3S7 1636 aa13.11□□□□□ -0.31
LINC00939-202ENST00000507313 DAPK1P53355 1430 aa13.11□□□□□ -0.31
LINC00939-202ENST00000507313 RICTORQ6R327 1708 aa13.11□□□□□ -0.31
LINC00939-202ENST00000507313 AMER1Q5JTC6 1135 aaPredicted RBP13.11□□□□□ -0.31
LINC00939-202ENST00000507313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC00939-202ENST00000507313 ESF1Q9H501 851 aaKnown RBP13.11□□□□□ -0.31
LINC00939-202ENST00000507313 PTPRKQ15262 1439 aa13.1□□□□□ -0.31
LINC00939-202ENST00000507313 TCOF1Q13428 1488 aaKnown RBP13.09□□□□□ -0.31
LINC00939-202ENST00000507313 RTEL1-TNFRSF6BF6WH68 1400 aa13.09□□□□□ -0.31
LINC00939-202ENST00000507313 KDM5CP41229 1560 aa13.09□□□□□ -0.31
LINC00939-202ENST00000507313 DHX29Q7Z478 1369 aaKnown RBP13.09□□□□□ -0.31
LINC00939-202ENST00000507313 TIMELESSQ9UNS1 1208 aa13.08□□□□□ -0.31
LINC00939-202ENST00000507313 CEBPAP49715 358 aaPredicted RBP13.08□□□□□ -0.32
LINC00939-202ENST00000507313 ANKRD30AQ9BXX3 1397 aa13.08□□□□□ -0.32
LINC00939-202ENST00000507313 ZMYM4Q5VZL5 1548 aa13.07□□□□□ -0.32
LINC00939-202ENST00000507313 KIF15Q9NS87 1388 aa13.07□□□□□ -0.32
LINC00939-202ENST00000507313 RRBP1Q9P2E9 1410 aaKnown RBP13.07□□□□□ -0.32
LINC00939-202ENST00000507313 ATP7AQ04656 1500 aa13.07□□□□□ -0.32
LINC00939-202ENST00000507313 A2MP01023 1474 aa13.07□□□□□ -0.32
LINC00939-202ENST00000507313 NCOA1Q15788 1441 aa13.06□□□□□ -0.32
LINC00939-202ENST00000507313 HECW2Q9P2P5 1572 aa13.05□□□□□ -0.32
LINC00939-202ENST00000507313 YTHDC1Q96MU7 727 aaKnown RBP13.04□□□□□ -0.32
LINC00939-202ENST00000507313 WASHC2CQ9Y4E1 1318 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms