RNA–Protein interactions for RNA: ENST00000507245.1

SMAD5-203, Transcript of SMAD family member 5, humanhuman

TSL 2

Gene SMAD5, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-203ENST00000507245 PELP1Q8IZL8 1130 aaKnown RBP12.14□□□□□ -0.47
SMAD5-203ENST00000507245 SLC39A7Q92504 469 aa12.14□□□□□ -0.47
SMAD5-203ENST00000507245 BOLA1Q9Y3E2 137 aa12.14□□□□□ -0.47
SMAD5-203ENST00000507245 L3MBTL3Q96JM7 780 aaPredicted RBP12.12□□□□□ -0.47
SMAD5-203ENST00000507245 MFSD10Q14728 455 aa12.11□□□□□ -0.47
SMAD5-203ENST00000507245 TMC2Q8TDI7 906 aa12.11□□□□□ -0.47
SMAD5-203ENST00000507245 C7P10643 843 aa12.1□□□□□ -0.47
SMAD5-203ENST00000507245 ARHGEF1Q92888 912 aaKnown RBP12.1□□□□□ -0.47
SMAD5-203ENST00000507245 GPHNQ9NQX3 736 aaPredicted RBP12.09□□□□□ -0.47
SMAD5-203ENST00000507245 TPRNQ4KMQ1 711 aa12.07□□□□□ -0.48
SMAD5-203ENST00000507245 PPP1R15BQ5SWA1 713 aa12.06□□□□□ -0.48
SMAD5-203ENST00000507245 TULP1O00294 542 aaPredicted RBP12.05□□□□□ -0.48
SMAD5-203ENST00000507245 TMEM121BQ9BXQ6 578 aaPredicted RBP12.05□□□□□ -0.48
SMAD5-203ENST00000507245 METRNQ9UJH8 293 aa12.05□□□□□ -0.48
SMAD5-203ENST00000507245 COLQQ9Y215 455 aaPredicted RBP12.04□□□□□ -0.48
SMAD5-203ENST00000507245 ABCC9O60706 1549 aa12.01□□□□□ -0.49
SMAD5-203ENST00000507245 PRKCSHP14314 528 aaPredicted RBP12.01□□□□□ -0.49
SMAD5-203ENST00000507245 CAMK2BQ13554 666 aa11.99□□□□□ -0.49
SMAD5-203ENST00000507245 FOXK1P85037 733 aa11.98□□□□□ -0.49
SMAD5-203ENST00000507245 DSG2Q14126 1118 aa11.98□□□□□ -0.49
SMAD5-203ENST00000507245 C2orf72A6NCS6 295 aa11.97□□□□□ -0.49
SMAD5-203ENST00000507245 C3orf67Q6ZVT6 689 aa11.97□□□□□ -0.49
SMAD5-203ENST00000507245 ARIH1Q9Y4X5 557 aaPredicted RBP11.95□□□□□ -0.5
SMAD5-203ENST00000507245 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
SMAD5-203ENST00000507245 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
SMAD5-203ENST00000507245 SEMA3EO15041 775 aa11.93□□□□□ -0.5
SMAD5-203ENST00000507245 KIF3CO14782 793 aa11.92□□□□□ -0.5
SMAD5-203ENST00000507245 SMYD5Q6GMV2 418 aa11.92□□□□□ -0.5
SMAD5-203ENST00000507245 TESPA1A2RU30 521 aaPredicted RBP11.88□□□□□ -0.51
SMAD5-203ENST00000507245 DPYSL4O14531 572 aa11.88□□□□□ -0.51
SMAD5-203ENST00000507245 LMOD2Q6P5Q4 547 aa11.88□□□□□ -0.51
SMAD5-203ENST00000507245 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMAD5-203ENST00000507245 EMILIN3Q9NT22 766 aa11.87□□□□□ -0.51
SMAD5-203ENST00000507245 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
SMAD5-203ENST00000507245 SPDYE16A6NNV3 312 aaPredicted RBP11.85□□□□□ -0.51
SMAD5-203ENST00000507245 MAP3K9P80192 1104 aa11.85□□□□□ -0.51
SMAD5-203ENST00000507245 TMEM92Q6UXU6 159 aa11.85□□□□□ -0.51
SMAD5-203ENST00000507245 POTEB2H3BUK9 544 aa11.81□□□□□ -0.52
SMAD5-203ENST00000507245 UPF1Q92900 1129 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMAD5-203ENST00000507245 PDIA6Q15084 440 aa11.8□□□□□ -0.52
SMAD5-203ENST00000507245 TBC1D12O60347 775 aa11.79□□□□□ -0.52
SMAD5-203ENST00000507245 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
SMAD5-203ENST00000507245 POTEJP0CG39 1038 aa11.77□□□□□ -0.53
SMAD5-203ENST00000507245 MLLT3P42568 568 aaPredicted RBP11.75□□□□□ -0.53
SMAD5-203ENST00000507245 OXER1Q8TDS5 423 aa11.75□□□□□ -0.53
SMAD5-203ENST00000507245 SCUBE2Q9NQ36 999 aa11.71□□□□□ -0.53
SMAD5-203ENST00000507245 GRXCR2A6NFK2 248 aa11.7□□□□□ -0.54
SMAD5-203ENST00000507245 SLC34A2O95436 690 aa11.7□□□□□ -0.54
SMAD5-203ENST00000507245 MAMSTRQ6ZN01 415 aa11.7□□□□□ -0.54
SMAD5-203ENST00000507245 ZC3H15Q8WU90 426 aaKnown RBP11.7□□□□□ -0.54
SMAD5-203ENST00000507245 PTCD2Q8WV60 388 aaKnown RBP11.7□□□□□ -0.54
SMAD5-203ENST00000507245 EVI5O60447 810 aa11.68□□□□□ -0.54
SMAD5-203ENST00000507245 RBM26Q5T8P6 1007 aaKnown RBP11.68□□□□□ -0.54
SMAD5-203ENST00000507245 GPIHBP1Q8IV16 184 aa11.67□□□□□ -0.54
SMAD5-203ENST00000507245 SLAIN1Q8ND83 568 aa11.66□□□□□ -0.54
SMAD5-203ENST00000507245 DDX12PQ92771 950 aa11.64□□□□□ -0.55
SMAD5-203ENST00000507245 PTGER2P43116 358 aa11.63□□□□□ -0.55
SMAD5-203ENST00000507245 RIMBP2O15034 1052 aa11.62□□□□□ -0.55
SMAD5-203ENST00000507245 DOK7Q18PE1 504 aa11.62□□□□□ -0.55
SMAD5-203ENST00000507245 LHX8Q68G74 356 aa11.62□□□□□ -0.55
SMAD5-203ENST00000507245 PCDHGA4Q9Y5G9 962 aa11.62□□□□□ -0.55
SMAD5-203ENST00000507245 RB1CC1Q8TDY2 1594 aa11.59□□□□□ -0.55
SMAD5-203ENST00000507245 NUTM2FA1L443 756 aa11.59□□□□□ -0.55
SMAD5-203ENST00000507245 ZMYND10O75800 440 aa11.59□□□□□ -0.55
SMAD5-203ENST00000507245 NACADO15069 1562 aa11.58□□□□□ -0.56
SMAD5-203ENST00000507245 OSBPP22059 807 aa11.57□□□□□ -0.56
SMAD5-203ENST00000507245 ZNF710Q8N1W2 664 aa11.57□□□□□ -0.56
SMAD5-203ENST00000507245 KRI1Q8N9T8 703 aaKnown RBP11.57□□□□□ -0.56
SMAD5-203ENST00000507245 ANO8Q9HCE9 1232 aaPredicted RBP11.57□□□□□ -0.56
SMAD5-203ENST00000507245 OTUD5Q96G74 571 aa11.56□□□□□ -0.56
SMAD5-203ENST00000507245 SLC24A3Q9HC58 644 aa11.55□□□□□ -0.56
SMAD5-203ENST00000507245 PHF14O94880 888 aa11.54□□□□□ -0.56
SMAD5-203ENST00000507245 BARGINQ6ZT62 677 aa11.54□□□□□ -0.56
SMAD5-203ENST00000507245 EPAS1Q99814 870 aa11.54□□□□□ -0.56
SMAD5-203ENST00000507245 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
SMAD5-203ENST00000507245 MYO15BQ96JP2 1530 aa11.53□□□□□ -0.56
SMAD5-203ENST00000507245 SNPHO15079 494 aa11.52□□□□□ -0.57
SMAD5-203ENST00000507245 HOXB3P14651 431 aaPredicted RBP11.5□□□□□ -0.57
SMAD5-203ENST00000507245 ARSIQ5FYB1 569 aa11.5□□□□□ -0.57
SMAD5-203ENST00000507245 MAP3K7O43318 606 aa11.49□□□□□ -0.57
SMAD5-203ENST00000507245 FCHSD2O94868 740 aa11.49□□□□□ -0.57
SMAD5-203ENST00000507245 NUDT7P0C024 238 aa11.49□□□□□ -0.57
SMAD5-203ENST00000507245 TYW1BQ6NUM6 668 aa11.48□□□□□ -0.57
SMAD5-203ENST00000507245 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
SMAD5-203ENST00000507245 EN1Q05925 392 aaPredicted RBP11.47□□□□□ -0.57
SMAD5-203ENST00000507245 FBXW7Q969H0 707 aa11.47□□□□□ -0.57
SMAD5-203ENST00000507245 RBM33Q96EV2 1170 aaKnown RBP11.47□□□□□ -0.57
SMAD5-203ENST00000507245 AK7Q96M32 723 aa11.47□□□□□ -0.57
SMAD5-203ENST00000507245 HIC1Q14526 733 aa11.46□□□□□ -0.57
SMAD5-203ENST00000507245 PCDHGA10Q9Y5H3 936 aa11.46□□□□□ -0.57
SMAD5-203ENST00000507245 ZCCHC6Q5VYS8 1495 aaKnown RBP11.45□□□□□ -0.58
SMAD5-203ENST00000507245 GNPATO15228 680 aa11.45□□□□□ -0.58
SMAD5-203ENST00000507245 ZNF454Q8N9F8 522 aa11.45□□□□□ -0.58
SMAD5-203ENST00000507245 KHSRPQ92945 711 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMAD5-203ENST00000507245 GPR153Q6NV75 609 aa11.44□□□□□ -0.58
SMAD5-203ENST00000507245 KDM4FA0A1W2PPD8 638 aa11.43□□□□□ -0.58
SMAD5-203ENST00000507245 GPR37O15354 613 aa11.43□□□□□ -0.58
SMAD5-203ENST00000507245 PRIM1P49642 420 aaKnown RBP11.43□□□□□ -0.58
SMAD5-203ENST00000507245 NEUROD2Q15784 382 aa11.43□□□□□ -0.58
SMAD5-203ENST00000507245 DCAF1Q9Y4B6 1507 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms