RNA–Protein interactions for RNA: ENST00000506958.5

APBB3-213, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 3

Gene APBB3, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-213	ENST00000506958	RICTOR	Q6R327	1708 aa		34.07	■■■■□ 3.04
APBB3-213	ENST00000506958	CDC42BPB	Q9Y5S2	1711 aa		34.04	■■■■□ 3.04
APBB3-213	ENST00000506958	AEBP2	Q6ZN18	517 aa	Predicted RBP	34.03	■■■■□ 3.04
APBB3-213	ENST00000506958	SCAPER	Q9BY12	1400 aa		34.03	■■■■□ 3.04
APBB3-213	ENST00000506958	CDC42BPA	Q5VT25	1732 aa		34.01	■■■■□ 3.04
APBB3-213	ENST00000506958	TIAM1	Q13009	1591 aa		34	■■■■□ 3.03
APBB3-213	ENST00000506958	POGZ	Q7Z3K3	1410 aa		34	■■■■□ 3.03
APBB3-213	ENST00000506958	ZMYM4	Q5VZL5	1548 aa		33.99	■■■■□ 3.03
APBB3-213	ENST00000506958	CCNB3	Q8WWL7	1395 aa		33.96	■■■■□ 3.03
APBB3-213	ENST00000506958	ARHGEF40	Q8TER5	1519 aa		33.94	■■■■□ 3.02
APBB3-213	ENST00000506958	MAGI2	Q86UL8	1455 aa		33.94	■■■■□ 3.02
APBB3-213	ENST00000506958	MAP3K1	Q13233	1512 aa		33.94	■■■■□ 3.02
APBB3-213	ENST00000506958	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.93	■■■■□ 3.02
APBB3-213	ENST00000506958	ZNF518A	Q6AHZ1	1483 aa		33.92	■■■■□ 3.02
APBB3-213	ENST00000506958	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.9	■■■■□ 3.02
APBB3-213	ENST00000506958	ABCC1	P33527	1531 aa		33.9	■■■■□ 3.02
APBB3-213	ENST00000506958	ITSN2	Q9NZM3	1697 aa		33.89	■■■■□ 3.02
APBB3-213	ENST00000506958	ZFYVE16	Q7Z3T8	1539 aa		33.89	■■■■□ 3.02
APBB3-213	ENST00000506958	KDM4F	A0A1W2PPD8	638 aa		33.87	■■■■□ 3.01
APBB3-213	ENST00000506958	LRRC9	Q6ZRR7	1453 aa		33.84	■■■■□ 3.01
APBB3-213	ENST00000506958	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.84	■■■■□ 3.01
APBB3-213	ENST00000506958	KDM5C	P41229	1560 aa		33.84	■■■■□ 3.01
APBB3-213	ENST00000506958	PLEKHH2	Q8IVE3	1493 aa		33.83	■■■■□ 3.01
APBB3-213	ENST00000506958	APLP2	Q06481	763 aa		33.83	■■■■□ 3.01
APBB3-213	ENST00000506958	NCOA2	Q15596	1464 aa		33.82	■■■■□ 3
APBB3-213	ENST00000506958	SAMD9L	Q8IVG5	1584 aa		33.81	■■■■□ 3
APBB3-213	ENST00000506958	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.8	■■■■□ 3
APBB3-213	ENST00000506958	YEATS2	Q9ULM3	1422 aa		33.77	■■■■□ 3
APBB3-213	ENST00000506958	HECW2	Q9P2P5	1572 aa		33.77	■■■■□ 3
APBB3-213	ENST00000506958	ARHGEF12	Q9NZN5	1544 aa		33.76	■■■■□ 3
APBB3-213	ENST00000506958	KIAA1107	Q9UPP5	1409 aa		33.76	■■■□□ 2.99
APBB3-213	ENST00000506958	AFAP1	Q8N556	730 aa		33.75	■■■□□ 2.99
APBB3-213	ENST00000506958	SYCP2	Q9BX26	1530 aa		33.74	■■■□□ 2.99
APBB3-213	ENST00000506958	TRAPPC8	Q9Y2L5	1435 aa		33.73	■■■□□ 2.99
APBB3-213	ENST00000506958	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.73	■■■□□ 2.99
APBB3-213	ENST00000506958	MLH3	Q9UHC1	1453 aa		33.72	■■■□□ 2.99
APBB3-213	ENST00000506958	ATP10A	O60312	1499 aa		33.7	■■■□□ 2.99
APBB3-213	ENST00000506958	MYT1L	Q9UL68	1186 aa		33.7	■■■□□ 2.99
APBB3-213	ENST00000506958	C9orf84	Q5VXU9	1444 aa		33.69	■■■□□ 2.98
APBB3-213	ENST00000506958	BCORL1	Q5H9F3	1711 aa		33.66	■■■□□ 2.98
APBB3-213	ENST00000506958	KANK4	Q5T7N3	995 aa	Predicted RBP	33.66	■■■□□ 2.98
APBB3-213	ENST00000506958	ADAMTSL3	P82987	1691 aa		33.62	■■■□□ 2.97
APBB3-213	ENST00000506958	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.62	■■■□□ 2.97
APBB3-213	ENST00000506958	DIP2C	Q9Y2E4	1556 aa		33.62	■■■□□ 2.97
APBB3-213	ENST00000506958	RERE	Q9P2R6	1566 aa		33.6	■■■□□ 2.97
APBB3-213	ENST00000506958	ABCA6	Q8N139	1617 aa		33.59	■■■□□ 2.97
APBB3-213	ENST00000506958	SPAG9	O60271	1321 aa	Known RBP	33.58	■■■□□ 2.97
APBB3-213	ENST00000506958	CAMSAP2	Q08AD1	1489 aa		33.58	■■■□□ 2.97
APBB3-213	ENST00000506958	KIDINS220	Q9ULH0	1771 aa		33.58	■■■□□ 2.97
APBB3-213	ENST00000506958	ZNF644	Q9H582	1327 aa	Predicted RBP	33.56	■■■□□ 2.96
APBB3-213	ENST00000506958	MYOM3	Q5VTT5	1437 aa		33.55	■■■□□ 2.96
APBB3-213	ENST00000506958	ATP7A	Q04656	1500 aa		33.54	■■■□□ 2.96
APBB3-213	ENST00000506958	SIGLEC1	Q9BZZ2	1709 aa		33.54	■■■□□ 2.96
APBB3-213	ENST00000506958	MBD5	Q9P267	1494 aa		33.54	■■■□□ 2.96
APBB3-213	ENST00000506958	MIA2	Q96PC5	1412 aa		33.53	■■■□□ 2.96
APBB3-213	ENST00000506958	INO80	Q9ULG1	1556 aa	Predicted RBP	33.53	■■■□□ 2.96
APBB3-213	ENST00000506958	RSPH4A	Q5TD94	716 aa		33.52	■■■□□ 2.96
APBB3-213	ENST00000506958	MADD	Q8WXG6	1647 aa		33.51	■■■□□ 2.96
APBB3-213	ENST00000506958	CCDC141	Q6ZP82	1450 aa		33.5	■■■□□ 2.95
APBB3-213	ENST00000506958	AGL	P35573	1532 aa		33.48	■■■□□ 2.95
APBB3-213	ENST00000506958	ARHGEF5	Q12774	1597 aa		33.47	■■■□□ 2.95
APBB3-213	ENST00000506958	PTPRM	P28827	1452 aa		33.45	■■■□□ 2.95
APBB3-213	ENST00000506958	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.45	■■■□□ 2.94
APBB3-213	ENST00000506958	MLEC	Q14165	292 aa		33.42	■■■□□ 2.94
APBB3-213	ENST00000506958	RIMS1	Q86UR5	1692 aa	Known RBP	33.42	■■■□□ 2.94
APBB3-213	ENST00000506958	FER1L4	A9Z1Z3	1794 aa		33.42	■■■□□ 2.94
APBB3-213	ENST00000506958	ADGB	Q8N7X0	1667 aa		33.4	■■■□□ 2.94
APBB3-213	ENST00000506958	A2M	P01023	1474 aa		33.37	■■■□□ 2.93
APBB3-213	ENST00000506958	TSPY4	P0CV99	314 aa		33.36	■■■□□ 2.93
APBB3-213	ENST00000506958	TSPY10	P0CW01	314 aa		33.36	■■■□□ 2.93
APBB3-213	ENST00000506958	PLXNC1	O60486	1568 aa		33.34	■■■□□ 2.93
APBB3-213	ENST00000506958	PTPN23	Q9H3S7	1636 aa		33.34	■■■□□ 2.93
APBB3-213	ENST00000506958	FGD6	Q6ZV73	1430 aa		33.33	■■■□□ 2.93
APBB3-213	ENST00000506958	MAST1	Q9Y2H9	1570 aa		33.29	■■■□□ 2.92
APBB3-213	ENST00000506958	TCOF1	Q13428	1488 aa	Known RBP	33.27	■■■□□ 2.92
APBB3-213	ENST00000506958	ESF1	Q9H501	851 aa	Known RBP	33.26	■■■□□ 2.91
APBB3-213	ENST00000506958	DHX29	Q7Z478	1369 aa	Known RBP	33.23	■■■□□ 2.91
APBB3-213	ENST00000506958	CNTLN	Q9NXG0	1405 aa		33.22	■■■□□ 2.91
APBB3-213	ENST00000506958	SHANK2	Q9UPX8	1470 aa		33.21	■■■□□ 2.91
APBB3-213	ENST00000506958	CROCC2	H7BZ55	1655 aa		33.19	■■■□□ 2.9
APBB3-213	ENST00000506958	DNMT1	P26358	1616 aa	Known RBP	33.18	■■■□□ 2.9
APBB3-213	ENST00000506958	DAPK1	P53355	1430 aa		33.15	■■■□□ 2.9
APBB3-213	ENST00000506958	ABCC5	O15440	1437 aa		33.14	■■■□□ 2.9
APBB3-213	ENST00000506958	PPP6R1	Q9UPN7	881 aa		33.14	■■■□□ 2.9
APBB3-213	ENST00000506958	PLPPR3	Q6T4P5	718 aa		33.13	■■■□□ 2.89
APBB3-213	ENST00000506958	MROH2A	A6NES4	1674 aa		33.12	■■■□□ 2.89
APBB3-213	ENST00000506958	GGT6	Q6P531	493 aa		33.1	■■■□□ 2.89
APBB3-213	ENST00000506958	FAM135A	Q9P2D6	1515 aa		33.07	■■■□□ 2.89
APBB3-213	ENST00000506958	C3	P01024	1663 aa		33.07	■■■□□ 2.89
APBB3-213	ENST00000506958	KIF3B	O15066	747 aa		33.07	■■■□□ 2.88
APBB3-213	ENST00000506958	FAM50A	Q14320	339 aa	Known RBP	33.07	■■■□□ 2.88
APBB3-213	ENST00000506958	DUOX2	Q9NRD8	1548 aa		33.06	■■■□□ 2.88
APBB3-213	ENST00000506958	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.06	■■■□□ 2.88
APBB3-213	ENST00000506958	CLTC	Q00610	1675 aa	Known RBP	33.04	■■■□□ 2.88
APBB3-213	ENST00000506958	CEBPA	P49715	358 aa	Predicted RBP	33.03	■■■□□ 2.88
APBB3-213	ENST00000506958	SETD1B	Q9UPS6	1966 aa	Known RBP	33.03	■■■□□ 2.88
APBB3-213	ENST00000506958	KIF15	Q9NS87	1388 aa		33.02	■■■□□ 2.88
APBB3-213	ENST00000506958	LMTK3	Q96Q04	1460 aa		33.01	■■■□□ 2.88
APBB3-213	ENST00000506958	ANKRD30A	Q9BXX3	1397 aa		33.01	■■■□□ 2.88
APBB3-213	ENST00000506958	PREX1	Q8TCU6	1659 aa		33.01	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms