RNA–Protein interactions for RNA: ENST00000506951.5

PACRGL-217, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-217ENST00000506951 POGZQ7Z3K3 1410 aa35.32■■■■□ 3.24
PACRGL-217ENST00000506951 SCAPERQ9BY12 1400 aa35.32■■■■□ 3.24
PACRGL-217ENST00000506951 ZFYVE16Q7Z3T8 1539 aa35.3■■■■□ 3.24
PACRGL-217ENST00000506951 PREX2Q70Z35 1606 aa35.28■■■■□ 3.24
PACRGL-217ENST00000506951 CEP162Q5TB80 1403 aa35.27■■■■□ 3.24
PACRGL-217ENST00000506951 CDC42BPBQ9Y5S2 1711 aa35.26■■■■□ 3.24
PACRGL-217ENST00000506951 ADAMTSL3P82987 1691 aa35.24■■■■□ 3.23
PACRGL-217ENST00000506951 BCORL1Q5H9F3 1711 aa35.24■■■■□ 3.23
PACRGL-217ENST00000506951 ARID4BQ4LE39 1312 aaPredicted RBP35.22■■■■□ 3.23
PACRGL-217ENST00000506951 ZNF518AQ6AHZ1 1483 aa35.22■■■■□ 3.23
PACRGL-217ENST00000506951 CDC42BPAQ5VT25 1732 aa35.19■■■■□ 3.22
PACRGL-217ENST00000506951 YEATS2Q9ULM3 1422 aa35.15■■■■□ 3.22
PACRGL-217ENST00000506951 KDM5CP41229 1560 aa35.14■■■■□ 3.22
PACRGL-217ENST00000506951 ABCC1P33527 1531 aa35.11■■■■□ 3.21
PACRGL-217ENST00000506951 MTUS2Q5JR59 1369 aa35.1■■■■□ 3.21
PACRGL-217ENST00000506951 MADDQ8WXG6 1647 aa35.1■■■■□ 3.21
PACRGL-217ENST00000506951 ITSN2Q9NZM3 1697 aa35.09■■■■□ 3.21
PACRGL-217ENST00000506951 HECW2Q9P2P5 1572 aa35.08■■■■□ 3.21
PACRGL-217ENST00000506951 ATP10AO60312 1499 aa35.08■■■■□ 3.21
PACRGL-217ENST00000506951 PTPRMP28827 1452 aa35.08■■■■□ 3.21
PACRGL-217ENST00000506951 EHBP1L1Q8N3D4 1523 aa35.06■■■■□ 3.2
PACRGL-217ENST00000506951 C9orf84Q5VXU9 1444 aa35.06■■■■□ 3.2
PACRGL-217ENST00000506951 GPATCH8Q9UKJ3 1502 aaKnown RBP35.01■■■■□ 3.2
PACRGL-217ENST00000506951 SIGLEC1Q9BZZ2 1709 aa35.01■■■■□ 3.2
PACRGL-217ENST00000506951 AFAP1Q8N556 730 aa35■■■■□ 3.19
PACRGL-217ENST00000506951 RIMS1Q86UR5 1692 aaKnown RBP35■■■■□ 3.19
PACRGL-217ENST00000506951 CCNB3Q8WWL7 1395 aa35■■■■□ 3.19
PACRGL-217ENST00000506951 MLH3Q9UHC1 1453 aa34.99■■■■□ 3.19
PACRGL-217ENST00000506951 MYT1LQ9UL68 1186 aa34.98■■■■□ 3.19
PACRGL-217ENST00000506951 SAMD9LQ8IVG5 1584 aa34.97■■■■□ 3.19
PACRGL-217ENST00000506951 PLEKHH2Q8IVE3 1493 aa34.96■■■■□ 3.19
PACRGL-217ENST00000506951 ARHGEF12Q9NZN5 1544 aa34.96■■■■□ 3.19
PACRGL-217ENST00000506951 REREQ9P2R6 1566 aa34.95■■■■□ 3.18
PACRGL-217ENST00000506951 DIP2CQ9Y2E4 1556 aa34.95■■■■□ 3.18
PACRGL-217ENST00000506951 FER1L4A9Z1Z3 1794 aa34.95■■■■□ 3.18
PACRGL-217ENST00000506951 LOC105371045A0A1W2PR82 267 aa34.94■■■■□ 3.18
PACRGL-217ENST00000506951 TRAPPC8Q9Y2L5 1435 aa34.94■■■■□ 3.18
PACRGL-217ENST00000506951 CFDP1Q9UEE9 299 aaPredicted RBP34.92■■■■□ 3.18
PACRGL-217ENST00000506951 ZNF777Q9ULD5 760 aaPredicted RBP34.92■■■■□ 3.18
PACRGL-217ENST00000506951 VPS8Q8N3P4 1428 aa34.91■■■■□ 3.18
PACRGL-217ENST00000506951 ABCA6Q8N139 1617 aa34.91■■■■□ 3.18
PACRGL-217ENST00000506951 SYCP2Q9BX26 1530 aa34.91■■■■□ 3.18
PACRGL-217ENST00000506951 TIAM1Q13009 1591 aa34.89■■■■□ 3.18
PACRGL-217ENST00000506951 SUPT6HQ7KZ85 1726 aaKnown RBP34.89■■■■□ 3.18
PACRGL-217ENST00000506951 KIAA1107Q9UPP5 1409 aa34.89■■■■□ 3.18
PACRGL-217ENST00000506951 KIDINS220Q9ULH0 1771 aa34.87■■■■□ 3.17
PACRGL-217ENST00000506951 MLECQ14165 292 aa34.84■■■■□ 3.17
PACRGL-217ENST00000506951 AGLP35573 1532 aa34.81■■■■□ 3.16
PACRGL-217ENST00000506951 SPAG9O60271 1321 aaKnown RBP34.77■■■■□ 3.16
PACRGL-217ENST00000506951 NCOA2Q15596 1464 aa34.76■■■■□ 3.15
PACRGL-217ENST00000506951 HNRNPMP52272 730 aaKnown RBP eCLIP34.75■■■■□ 3.15
PACRGL-217ENST00000506951 ATP7AQ04656 1500 aa34.75■■■■□ 3.15
PACRGL-217ENST00000506951 MAP3K1Q13233 1512 aa34.75■■■■□ 3.15
PACRGL-217ENST00000506951 INO80Q9ULG1 1556 aaPredicted RBP34.74■■■■□ 3.15
PACRGL-217ENST00000506951 LRRC9Q6ZRR7 1453 aa34.7■■■■□ 3.15
PACRGL-217ENST00000506951 LMTK3Q96Q04 1460 aa34.68■■■■□ 3.14
PACRGL-217ENST00000506951 ADGBQ8N7X0 1667 aa34.64■■■■□ 3.14
PACRGL-217ENST00000506951 PLPPR3Q6T4P5 718 aa34.64■■■■□ 3.14
PACRGL-217ENST00000506951 ESF1Q9H501 851 aaKnown RBP34.64■■■■□ 3.14
PACRGL-217ENST00000506951 MBD5Q9P267 1494 aa34.62■■■■□ 3.13
PACRGL-217ENST00000506951 CAMSAP2Q08AD1 1489 aa34.61■■■■□ 3.13
PACRGL-217ENST00000506951 ZNF644Q9H582 1327 aaPredicted RBP34.6■■■■□ 3.13
PACRGL-217ENST00000506951 PLXNC1O60486 1568 aa34.6■■■■□ 3.13
PACRGL-217ENST00000506951 PREX1Q8TCU6 1659 aa34.6■■■■□ 3.13
PACRGL-217ENST00000506951 A2MP01023 1474 aa34.58■■■■□ 3.13
PACRGL-217ENST00000506951 CNTLNQ9NXG0 1405 aa34.58■■■■□ 3.13
PACRGL-217ENST00000506951 CCDC141Q6ZP82 1450 aa34.58■■■■□ 3.13
PACRGL-217ENST00000506951 RTEL1-TNFRSF6BF6WH68 1400 aa34.57■■■■□ 3.13
PACRGL-217ENST00000506951 RSPH4AQ5TD94 716 aa34.57■■■■□ 3.12
PACRGL-217ENST00000506951 C3P01024 1663 aa34.54■■■■□ 3.12
PACRGL-217ENST00000506951 APLP2Q06481 763 aa34.54■■■■□ 3.12
PACRGL-217ENST00000506951 SETD1BQ9UPS6 1966 aaKnown RBP34.53■■■■□ 3.12
PACRGL-217ENST00000506951 ARHGEF5Q12774 1597 aa34.52■■■■□ 3.12
PACRGL-217ENST00000506951 MROH2AA6NES4 1674 aa34.51■■■■□ 3.12
PACRGL-217ENST00000506951 CEBPAP49715 358 aaPredicted RBP34.47■■■■□ 3.11
PACRGL-217ENST00000506951 KANK4Q5T7N3 995 aaPredicted RBP34.46■■■■□ 3.11
PACRGL-217ENST00000506951 MIA2Q96PC5 1412 aa34.46■■■■□ 3.11
PACRGL-217ENST00000506951 MYOM3Q5VTT5 1437 aa34.45■■■■□ 3.11
PACRGL-217ENST00000506951 UHRF1BP1Q6BDS2 1440 aa34.44■■■■□ 3.1
PACRGL-217ENST00000506951 TSPY4P0CV99 314 aa34.4■■■■□ 3.1
PACRGL-217ENST00000506951 TSPY10P0CW01 314 aa34.4■■■■□ 3.1
PACRGL-217ENST00000506951 HSPA2P54652 639 aa34.39■■■■□ 3.1
PACRGL-217ENST00000506951 PPP6R1Q9UPN7 881 aa34.39■■■■□ 3.1
PACRGL-217ENST00000506951 DHX29Q7Z478 1369 aaKnown RBP34.38■■■■□ 3.09
PACRGL-217ENST00000506951 CLTCQ00610 1675 aaKnown RBP34.38■■■■□ 3.09
PACRGL-217ENST00000506951 NPATQ14207 1427 aa34.35■■■■□ 3.09
PACRGL-217ENST00000506951 MAST1Q9Y2H9 1570 aa34.35■■■■□ 3.09
PACRGL-217ENST00000506951 GGT6Q6P531 493 aa34.33■■■■□ 3.09
PACRGL-217ENST00000506951 ZMYM3Q14202 1370 aa34.32■■■■□ 3.08
PACRGL-217ENST00000506951 FAM135AQ9P2D6 1515 aa34.31■■■■□ 3.08
PACRGL-217ENST00000506951 PTPN23Q9H3S7 1636 aa34.25■■■■□ 3.07
PACRGL-217ENST00000506951 KIF3BO15066 747 aa34.22■■■■□ 3.07
PACRGL-217ENST00000506951 KDM5DQ9BY66 1539 aa34.21■■■■□ 3.07
PACRGL-217ENST00000506951 CROCC2H7BZ55 1655 aa34.21■■■■□ 3.07
PACRGL-217ENST00000506951 EIF2AK4Q9P2K8 1649 aaKnown RBP34.19■■■■□ 3.06
PACRGL-217ENST00000506951 DMRT2Q9Y5R5 561 aa34.18■■■■□ 3.06
PACRGL-217ENST00000506951 FGD6Q6ZV73 1430 aa34.18■■■■□ 3.06
PACRGL-217ENST00000506951 SHANK2Q9UPX8 1470 aa34.18■■■■□ 3.06
PACRGL-217ENST00000506951 STRCQ7RTU9 1775 aa34.17■■■■□ 3.06
PACRGL-217ENST00000506951 ZNF142P52746 1687 aaPredicted RBP34.16■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms