RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 RYDENQ9NUL5 291 aaKnown RBP9.21□□□□□ -0.94
CDC42SE2-210ENST00000506929 PLSCR2Q9NRY7 297 aa9.2□□□□□ -0.94
CDC42SE2-210ENST00000506929 HAP1P54257 671 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE2-210ENST00000506929 POTEMA6NI47 508 aa9.18□□□□□ -0.94
CDC42SE2-210ENST00000506929 TMEM92Q6UXU6 159 aa9.17□□□□□ -0.94
CDC42SE2-210ENST00000506929 POTEGQ6S5H5 508 aa9.15□□□□□ -0.94
CDC42SE2-210ENST00000506929 SNPHO15079 494 aa9.14□□□□□ -0.95
CDC42SE2-210ENST00000506929 KDM2AQ9Y2K7 1162 aa9.12□□□□□ -0.95
CDC42SE2-210ENST00000506929 NCKAP5LQ9HCH0 1330 aa9.11□□□□□ -0.95
CDC42SE2-210ENST00000506929 FAM163AQ96GL9 167 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE2-210ENST00000506929 LCE2DQ5TA82 110 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE2-210ENST00000506929 C2orf72A6NCS6 295 aa9.06□□□□□ -0.96
CDC42SE2-210ENST00000506929 CRISPLD2Q9H0B8 497 aa9.05□□□□□ -0.96
CDC42SE2-210ENST00000506929 KIF3CO14782 793 aa9.04□□□□□ -0.96
CDC42SE2-210ENST00000506929 TMC2Q8TDI7 906 aa9.04□□□□□ -0.96
CDC42SE2-210ENST00000506929 LARP6Q9BRS8 491 aaKnown RBP9.04□□□□□ -0.96
CDC42SE2-210ENST00000506929 ST18O60284 1047 aa9.03□□□□□ -0.96
CDC42SE2-210ENST00000506929 SLC24A1O60721 1099 aa9.03□□□□□ -0.96
CDC42SE2-210ENST00000506929 DOK7Q18PE1 504 aa9.03□□□□□ -0.96
CDC42SE2-210ENST00000506929 HOXB3P14651 431 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE2-210ENST00000506929 DSG2Q14126 1118 aa9.02□□□□□ -0.97
CDC42SE2-210ENST00000506929 GPHNQ9NQX3 736 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE2-210ENST00000506929 RIMBP2O15034 1052 aa8.99□□□□□ -0.97
CDC42SE2-210ENST00000506929 ZNF710Q8N1W2 664 aa8.99□□□□□ -0.97
CDC42SE2-210ENST00000506929 PDE4AP27815 886 aa8.98□□□□□ -0.97
CDC42SE2-210ENST00000506929 PCDH10Q9P2E7 1040 aa8.98□□□□□ -0.97
CDC42SE2-210ENST00000506929 MFSD10Q14728 455 aa8.97□□□□□ -0.97
CDC42SE2-210ENST00000506929 PPP1R15BQ5SWA1 713 aa8.96□□□□□ -0.98
CDC42SE2-210ENST00000506929 PLPP6Q8IY26 295 aa8.96□□□□□ -0.98
CDC42SE2-210ENST00000506929 ZSWIM6Q9HCJ5 1215 aa8.96□□□□□ -0.98
CDC42SE2-210ENST00000506929 FOXK1P85037 733 aa8.95□□□□□ -0.98
CDC42SE2-210ENST00000506929 VSIG10Q8N0Z9 540 aa8.95□□□□□ -0.98
CDC42SE2-210ENST00000506929 DDX27Q96GQ7 796 aaKnown RBP8.95□□□□□ -0.98
CDC42SE2-210ENST00000506929 HOXB1P14653 301 aaPredicted RBP8.93□□□□□ -0.98
CDC42SE2-210ENST00000506929 MARVELD3Q96A59 401 aa8.93□□□□□ -0.98
CDC42SE2-210ENST00000506929 SLC34A2O95436 690 aa8.92□□□□□ -0.98
CDC42SE2-210ENST00000506929 EMILIN3Q9NT22 766 aa8.92□□□□□ -0.98
CDC42SE2-210ENST00000506929 EMP3P54852 163 aa8.91□□□□□ -0.98
CDC42SE2-210ENST00000506929 GPR153Q6NV75 609 aa8.9□□□□□ -0.98
CDC42SE2-210ENST00000506929 KCNV2Q8TDN2 545 aa8.89□□□□□ -0.99
CDC42SE2-210ENST00000506929 UPF1Q92900 1129 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDC42SE2-210ENST00000506929 KHSRPQ92945 711 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDC42SE2-210ENST00000506929 WDR70Q9NW82 654 aa8.89□□□□□ -0.99
CDC42SE2-210ENST00000506929 CAMK2BQ13554 666 aa8.87□□□□□ -0.99
CDC42SE2-210ENST00000506929 ARSIQ5FYB1 569 aa8.87□□□□□ -0.99
CDC42SE2-210ENST00000506929 E2F4Q16254 413 aa8.86□□□□□ -0.99
CDC42SE2-210ENST00000506929 CDAN1Q8IWY9 1227 aa8.85□□□□□ -0.99
CDC42SE2-210ENST00000506929 PTCD2Q8WV60 388 aaKnown RBP8.85□□□□□ -0.99
CDC42SE2-210ENST00000506929 PCDHGA4Q9Y5G9 962 aa8.85□□□□□ -0.99
CDC42SE2-210ENST00000506929 FAM205CA6NFA0 338 aa8.84□□□□□ -0.99
CDC42SE2-210ENST00000506929 ERBB3P21860 1342 aa8.83□□□□□ -1
CDC42SE2-210ENST00000506929 DPYSL4O14531 572 aa8.83□□□□□ -1
CDC42SE2-210ENST00000506929 OXER1Q8TDS5 423 aa8.83□□□□□ -1
CDC42SE2-210ENST00000506929 TBC1D12O60347 775 aa8.82□□□□□ -1
CDC42SE2-210ENST00000506929 HS3ST6Q96QI5 342 aa8.81□□□□□ -1
CDC42SE2-210ENST00000506929 NUDT7P0C024 238 aa8.8□□□□□ -1
CDC42SE2-210ENST00000506929 POTEB3A0JP26 581 aa8.79□□□□□ -1
CDC42SE2-210ENST00000506929 POTEBQ6S5H4 581 aa8.79□□□□□ -1
CDC42SE2-210ENST00000506929 ZNF316A6NFI3 1004 aaPredicted RBP8.78□□□□□ -1
CDC42SE2-210ENST00000506929 KDM4FA0A1W2PPD8 638 aa8.77□□□□□ -1.01
CDC42SE2-210ENST00000506929 VARS2Q5ST30 1063 aaKnown RBP8.77□□□□□ -1.01
CDC42SE2-210ENST00000506929 MAP3K9P80192 1104 aa8.76□□□□□ -1.01
CDC42SE2-210ENST00000506929 EVI5O60447 810 aa8.74□□□□□ -1.01
CDC42SE2-210ENST00000506929 LHX6Q9UPM6 363 aa8.74□□□□□ -1.01
CDC42SE2-210ENST00000506929 PSDA5PKW4 1024 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE2-210ENST00000506929 SEMA3EO15041 775 aa8.73□□□□□ -1.01
CDC42SE2-210ENST00000506929 ZNF687Q8N1G0 1237 aa8.73□□□□□ -1.01
CDC42SE2-210ENST00000506929 ARHGEF1Q92888 912 aaKnown RBP8.73□□□□□ -1.01
CDC42SE2-210ENST00000506929 ARIH1Q9Y4X5 557 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE2-210ENST00000506929 MLLT3P42568 568 aaPredicted RBP8.71□□□□□ -1.02
CDC42SE2-210ENST00000506929 PDIA6Q15084 440 aa8.7□□□□□ -1.02
CDC42SE2-210ENST00000506929 P3H3Q8IVL6 736 aa8.7□□□□□ -1.02
CDC42SE2-210ENST00000506929 PRIM1P49642 420 aaKnown RBP8.69□□□□□ -1.02
CDC42SE2-210ENST00000506929 DDX12PQ92771 950 aa8.69□□□□□ -1.02
CDC42SE2-210ENST00000506929 ANO8Q9HCE9 1232 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE2-210ENST00000506929 KRTAP3-3Q9BYR6 98 aa8.68□□□□□ -1.02
CDC42SE2-210ENST00000506929 KRTAP3-2Q9BYR7 98 aa8.68□□□□□ -1.02
CDC42SE2-210ENST00000506929 PPP4R3BQ5MIZ7 849 aa8.66□□□□□ -1.02
CDC42SE2-210ENST00000506929 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.02
CDC42SE2-210ENST00000506929 PBX2P40425 430 aa8.65□□□□□ -1.02
CDC42SE2-210ENST00000506929 SPNS2Q8IVW8 549 aa8.65□□□□□ -1.02
CDC42SE2-210ENST00000506929 SPDYE16A6NNV3 312 aaPredicted RBP8.64□□□□□ -1.03
CDC42SE2-210ENST00000506929 TESPA1A2RU30 521 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE2-210ENST00000506929 FOSBP53539 338 aa8.63□□□□□ -1.03
CDC42SE2-210ENST00000506929 ZNF454Q8N9F8 522 aa8.63□□□□□ -1.03
CDC42SE2-210ENST00000506929 PCDHGA10Q9Y5H3 936 aa8.63□□□□□ -1.03
CDC42SE2-210ENST00000506929 MMRN1Q13201 1228 aa8.62□□□□□ -1.03
CDC42SE2-210ENST00000506929 JPH4Q96JJ6 628 aa8.62□□□□□ -1.03
CDC42SE2-210ENST00000506929 PTGER2P43116 358 aa8.61□□□□□ -1.03
CDC42SE2-210ENST00000506929 ARHGAP33O14559 1287 aa8.6□□□□□ -1.03
CDC42SE2-210ENST00000506929 OSBPP22059 807 aa8.6□□□□□ -1.03
CDC42SE2-210ENST00000506929 NBR1Q14596 966 aa8.6□□□□□ -1.03
CDC42SE2-210ENST00000506929 POTEEQ6S8J3 1075 aa8.6□□□□□ -1.03
CDC42SE2-210ENST00000506929 RBM33Q96EV2 1170 aaKnown RBP8.6□□□□□ -1.03
CDC42SE2-210ENST00000506929 LSM11P83369 360 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDC42SE2-210ENST00000506929 RBM26Q5T8P6 1007 aaKnown RBP8.59□□□□□ -1.03
CDC42SE2-210ENST00000506929 ADAM33Q9BZ11 813 aa8.59□□□□□ -1.03
CDC42SE2-210ENST00000506929 ZDHHC16Q969W1 377 aa8.58□□□□□ -1.04
CDC42SE2-210ENST00000506929 KCNH8Q96L42 1107 aa8.58□□□□□ -1.04
CDC42SE2-210ENST00000506929 BCL2L12Q9HB09 334 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms