RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 NCKAP5LQ9HCH0 1330 aa16.81■□□□□ 0.28
RETREG1-203ENST00000506441 PELP1Q8IZL8 1130 aaKnown RBP16.8■□□□□ 0.28
RETREG1-203ENST00000506441 MFSD10Q14728 455 aa16.79■□□□□ 0.28
RETREG1-203ENST00000506441 GPHNQ9NQX3 736 aaPredicted RBP16.79■□□□□ 0.28
RETREG1-203ENST00000506441 ARHGEF1Q92888 912 aaKnown RBP16.78■□□□□ 0.28
RETREG1-203ENST00000506441 METRNQ9UJH8 293 aa16.78■□□□□ 0.28
RETREG1-203ENST00000506441 TMEM121BQ9BXQ6 578 aaPredicted RBP16.77■□□□□ 0.28
RETREG1-203ENST00000506441 KCNV2Q8TDN2 545 aa16.75■□□□□ 0.27
RETREG1-203ENST00000506441 TULP1O00294 542 aaPredicted RBP16.73■□□□□ 0.27
RETREG1-203ENST00000506441 PPP1R15BQ5SWA1 713 aa16.71■□□□□ 0.27
RETREG1-203ENST00000506441 COLQQ9Y215 455 aaPredicted RBP16.71■□□□□ 0.27
RETREG1-203ENST00000506441 POTEIP0CG38 1075 aa16.68■□□□□ 0.26
RETREG1-203ENST00000506441 C3orf67Q6ZVT6 689 aa16.67■□□□□ 0.26
RETREG1-203ENST00000506441 FOXK1P85037 733 aa16.65■□□□□ 0.26
RETREG1-203ENST00000506441 CAMK2BQ13554 666 aa16.62■□□□□ 0.25
RETREG1-203ENST00000506441 ARIH1Q9Y4X5 557 aaPredicted RBP16.61■□□□□ 0.25
RETREG1-203ENST00000506441 DSG2Q14126 1118 aa16.6■□□□□ 0.25
RETREG1-203ENST00000506441 C2orf72A6NCS6 295 aa16.59■□□□□ 0.25
RETREG1-203ENST00000506441 POTEFA5A3E0 1075 aa16.57■□□□□ 0.24
RETREG1-203ENST00000506441 SMYD5Q6GMV2 418 aa16.57■□□□□ 0.24
RETREG1-203ENST00000506441 PLPP6Q8IY26 295 aa16.57■□□□□ 0.24
RETREG1-203ENST00000506441 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.56■□□□□ 0.24
RETREG1-203ENST00000506441 KIF3CO14782 793 aa16.54■□□□□ 0.24
RETREG1-203ENST00000506441 TPRNQ4KMQ1 711 aa16.51■□□□□ 0.23
RETREG1-203ENST00000506441 SPDYE16A6NNV3 312 aaPredicted RBP16.49■□□□□ 0.23
RETREG1-203ENST00000506441 MAP3K9P80192 1104 aa16.47■□□□□ 0.23
RETREG1-203ENST00000506441 TBC1D12O60347 775 aa16.45■□□□□ 0.22
RETREG1-203ENST00000506441 MAMSTRQ6ZN01 415 aa16.43■□□□□ 0.22
RETREG1-203ENST00000506441 TESPA1A2RU30 521 aaPredicted RBP16.42■□□□□ 0.22
RETREG1-203ENST00000506441 SEMA3EO15041 775 aa16.42■□□□□ 0.22
RETREG1-203ENST00000506441 TMEM92Q6UXU6 159 aa16.42■□□□□ 0.22
RETREG1-203ENST00000506441 DPYSL4O14531 572 aa16.41■□□□□ 0.22
RETREG1-203ENST00000506441 EMILIN3Q9NT22 766 aa16.41■□□□□ 0.22
RETREG1-203ENST00000506441 ZNF316A6NFI3 1004 aaPredicted RBP16.4■□□□□ 0.22
RETREG1-203ENST00000506441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.4■□□□□ 0.22
RETREG1-203ENST00000506441 LMOD2Q6P5Q4 547 aa16.38■□□□□ 0.21
RETREG1-203ENST00000506441 SCUBE2Q9NQ36 999 aa16.37■□□□□ 0.21
RETREG1-203ENST00000506441 PRKCSHP14314 528 aaPredicted RBP16.36■□□□□ 0.21
RETREG1-203ENST00000506441 PDIA6Q15084 440 aa16.35■□□□□ 0.21
RETREG1-203ENST00000506441 UPF1Q92900 1129 aaKnown RBP eCLIP16.34■□□□□ 0.21
RETREG1-203ENST00000506441 OXER1Q8TDS5 423 aa16.32■□□□□ 0.2
RETREG1-203ENST00000506441 SLC34A2O95436 690 aa16.31■□□□□ 0.2
RETREG1-203ENST00000506441 PTCD2Q8WV60 388 aaKnown RBP16.28■□□□□ 0.2
RETREG1-203ENST00000506441 RIMBP2O15034 1052 aa16.24■□□□□ 0.19
RETREG1-203ENST00000506441 SLAIN1Q8ND83 568 aa16.24■□□□□ 0.19
RETREG1-203ENST00000506441 DOK7Q18PE1 504 aa16.23■□□□□ 0.19
RETREG1-203ENST00000506441 EVI5O60447 810 aa16.21■□□□□ 0.19
RETREG1-203ENST00000506441 MLLT3P42568 568 aaPredicted RBP16.19■□□□□ 0.18
RETREG1-203ENST00000506441 PTGER2P43116 358 aa16.19■□□□□ 0.18
RETREG1-203ENST00000506441 GRXCR2A6NFK2 248 aa16.18■□□□□ 0.18
RETREG1-203ENST00000506441 SNPHO15079 494 aa16.17■□□□□ 0.18
RETREG1-203ENST00000506441 POTEB2H3BUK9 544 aa16.15■□□□□ 0.18
RETREG1-203ENST00000506441 PCDHGA4Q9Y5G9 962 aa16.14■□□□□ 0.17
RETREG1-203ENST00000506441 POTEJP0CG39 1038 aa16.13■□□□□ 0.17
RETREG1-203ENST00000506441 GPIHBP1Q8IV16 184 aa16.13■□□□□ 0.17
RETREG1-203ENST00000506441 ZNF710Q8N1W2 664 aa16.13■□□□□ 0.17
RETREG1-203ENST00000506441 ZC3H15Q8WU90 426 aaKnown RBP16.12■□□□□ 0.17
RETREG1-203ENST00000506441 ANO8Q9HCE9 1232 aaPredicted RBP16.12■□□□□ 0.17
RETREG1-203ENST00000506441 ZSWIM6Q9HCJ5 1215 aa16.12■□□□□ 0.17
RETREG1-203ENST00000506441 DDX12PQ92771 950 aa16.09■□□□□ 0.17
RETREG1-203ENST00000506441 RBM26Q5T8P6 1007 aaKnown RBP16.08■□□□□ 0.16
RETREG1-203ENST00000506441 EPAS1Q99814 870 aa16.08■□□□□ 0.16
RETREG1-203ENST00000506441 NUTM2FA1L443 756 aa16.04■□□□□ 0.16
RETREG1-203ENST00000506441 PHF14O94880 888 aa16.03■□□□□ 0.16
RETREG1-203ENST00000506441 KRI1Q8N9T8 703 aaKnown RBP16.01■□□□□ 0.15
RETREG1-203ENST00000506441 ZMYND10O75800 440 aa16■□□□□ 0.15
RETREG1-203ENST00000506441 OSBPP22059 807 aa16■□□□□ 0.15
RETREG1-203ENST00000506441 FBXW7Q969H0 707 aa15.99■□□□□ 0.15
RETREG1-203ENST00000506441 HOXB3P14651 431 aaPredicted RBP15.98■□□□□ 0.15
RETREG1-203ENST00000506441 ARSIQ5FYB1 569 aa15.97■□□□□ 0.15
RETREG1-203ENST00000506441 LHX8Q68G74 356 aa15.97■□□□□ 0.15
RETREG1-203ENST00000506441 TYW1BQ6NUM6 668 aa15.97■□□□□ 0.15
RETREG1-203ENST00000506441 BARGINQ6ZT62 677 aa15.96■□□□□ 0.15
RETREG1-203ENST00000506441 PSDA5PKW4 1024 aaPredicted RBP15.95■□□□□ 0.14
RETREG1-203ENST00000506441 JPH4Q96JJ6 628 aa15.95■□□□□ 0.14
RETREG1-203ENST00000506441 FCHSD2O94868 740 aa15.94■□□□□ 0.14
RETREG1-203ENST00000506441 NUDT7P0C024 238 aa15.93■□□□□ 0.14
RETREG1-203ENST00000506441 MAP3K7O43318 606 aa15.92■□□□□ 0.14
RETREG1-203ENST00000506441 GPR153Q6NV75 609 aa15.92■□□□□ 0.14
RETREG1-203ENST00000506441 HIC1Q14526 733 aa15.9■□□□□ 0.14
RETREG1-203ENST00000506441 EN1Q05925 392 aaPredicted RBP15.89■□□□□ 0.13
RETREG1-203ENST00000506441 ZNF454Q8N9F8 522 aa15.89■□□□□ 0.13
RETREG1-203ENST00000506441 PCDHGA10Q9Y5H3 936 aa15.89■□□□□ 0.13
RETREG1-203ENST00000506441 KDM4FA0A1W2PPD8 638 aa15.88■□□□□ 0.13
RETREG1-203ENST00000506441 OTUD5Q96G74 571 aa15.88■□□□□ 0.13
RETREG1-203ENST00000506441 AK7Q96M32 723 aa15.88■□□□□ 0.13
RETREG1-203ENST00000506441 SLC24A3Q9HC58 644 aa15.88■□□□□ 0.13
RETREG1-203ENST00000506441 FOSBP53539 338 aa15.87■□□□□ 0.13
RETREG1-203ENST00000506441 ZDHHC16Q969W1 377 aa15.87■□□□□ 0.13
RETREG1-203ENST00000506441 RBM33Q96EV2 1170 aaKnown RBP15.87■□□□□ 0.13
RETREG1-203ENST00000506441 GNPATO15228 680 aa15.86■□□□□ 0.13
RETREG1-203ENST00000506441 CERKQ8TCT0 537 aa15.85■□□□□ 0.13
RETREG1-203ENST00000506441 HOXB1P14653 301 aaPredicted RBP15.84■□□□□ 0.13
RETREG1-203ENST00000506441 PPP4R3BQ5MIZ7 849 aa15.84■□□□□ 0.13
RETREG1-203ENST00000506441 KHSRPQ92945 711 aaKnown RBP eCLIP15.84■□□□□ 0.13
RETREG1-203ENST00000506441 MINK1Q8N4C8 1332 aaPredicted RBP15.84■□□□□ 0.13
RETREG1-203ENST00000506441 NISCHQ9Y2I1 1504 aa15.84■□□□□ 0.13
RETREG1-203ENST00000506441 PTGDRQ13258 359 aa15.8■□□□□ 0.12
RETREG1-203ENST00000506441 LHX6Q9UPM6 363 aa15.8■□□□□ 0.12
RETREG1-203ENST00000506441 MAP2K5Q13163 448 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms