RNA–Protein interactions for RNA: ENST00000506147.5

MATR3-235, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-235ENST00000506147 ARAP3Q8WWN8 1544 aa24.27■■□□□ 1.48
MATR3-235ENST00000506147 TTC37Q6PGP7 1564 aa24.27■■□□□ 1.48
MATR3-235ENST00000506147 ITSN2Q9NZM3 1697 aa24.27■■□□□ 1.48
MATR3-235ENST00000506147 PLCH2O75038 1416 aa24.27■■□□□ 1.48
MATR3-235ENST00000506147 FGD6Q6ZV73 1430 aa24.26■■□□□ 1.47
MATR3-235ENST00000506147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.25■■□□□ 1.475e-19■■□□□ 13.5
MATR3-235ENST00000506147 CFDP1Q9UEE9 299 aaPredicted RBP24.24■■□□□ 1.47
MATR3-235ENST00000506147 TRIM26Q12899 539 aaPredicted RBP24.23■■□□□ 1.47
MATR3-235ENST00000506147 CDC42BPAQ5VT25 1732 aa24.22■■□□□ 1.47
MATR3-235ENST00000506147 PREX2Q70Z35 1606 aa24.22■■□□□ 1.47
MATR3-235ENST00000506147 MYO5CQ9NQX4 1742 aa24.21■■□□□ 1.47
MATR3-235ENST00000506147 CD109Q6YHK3 1445 aa24.21■■□□□ 1.47
MATR3-235ENST00000506147 TCOF1Q13428 1488 aaKnown RBP24.19■■□□□ 1.46
MATR3-235ENST00000506147 EFCAB2Q5VUJ9 269 aa24.19■■□□□ 1.46
MATR3-235ENST00000506147 COL17A1Q9UMD9 1497 aaPredicted RBP24.19■■□□□ 1.46
MATR3-235ENST00000506147 MAP3K4Q9Y6R4 1608 aa24.17■■□□□ 1.46
MATR3-235ENST00000506147 CDC42BPBQ9Y5S2 1711 aa24.16■■□□□ 1.46
MATR3-235ENST00000506147 ARHGAP5Q13017 1502 aa24.15■■□□□ 1.46
MATR3-235ENST00000506147 PTPN23Q9H3S7 1636 aa24.15■■□□□ 1.46
MATR3-235ENST00000506147 PLEKHH2Q8IVE3 1493 aa24.13■■□□□ 1.45
MATR3-235ENST00000506147 FANCAO15360 1455 aa24.11■■□□□ 1.45
MATR3-235ENST00000506147 KIAA1107Q9UPP5 1409 aa24.1■■□□□ 1.45
MATR3-235ENST00000506147 FAM50AQ14320 339 aaKnown RBP24.1■■□□□ 1.45
MATR3-235ENST00000506147 CAMSAP2Q08AD1 1489 aa24.1■■□□□ 1.45
MATR3-235ENST00000506147 CFAP74Q9C0B2 1584 aa24.09■■□□□ 1.45
MATR3-235ENST00000506147 NEO1Q92859 1461 aa24.09■■□□□ 1.45
MATR3-235ENST00000506147 RSPH4AQ5TD94 716 aa24.09■■□□□ 1.45
MATR3-235ENST00000506147 ZNF777Q9ULD5 760 aaPredicted RBP24.08■■□□□ 1.45
MATR3-235ENST00000506147 TEX14Q8IWB6 1497 aa24.07■■□□□ 1.44
MATR3-235ENST00000506147 LMTK3Q96Q04 1460 aa24.07■■□□□ 1.44
MATR3-235ENST00000506147 ZNF644Q9H582 1327 aaPredicted RBP24.07■■□□□ 1.44
MATR3-235ENST00000506147 SAMD9LQ8IVG5 1584 aa24.06■■□□□ 1.44
MATR3-235ENST00000506147 AKNAQ7Z591 1439 aa24.04■■□□□ 1.44
MATR3-235ENST00000506147 MBD5Q9P267 1494 aa24.01■■□□□ 1.43
MATR3-235ENST00000506147 ABCC1P33527 1531 aa24.01■■□□□ 1.43
MATR3-235ENST00000506147 ARHGEF5Q12774 1597 aa24.01■■□□□ 1.43
MATR3-235ENST00000506147 DNMT1P26358 1616 aaKnown RBP23.98■■□□□ 1.43
MATR3-235ENST00000506147 DAPK1P53355 1430 aa23.97■■□□□ 1.43
MATR3-235ENST00000506147 SYCP2Q9BX26 1530 aa23.96■■□□□ 1.43
MATR3-235ENST00000506147 ABCC5O15440 1437 aa23.96■■□□□ 1.43
MATR3-235ENST00000506147 SCAPERQ9BY12 1400 aa23.96■■□□□ 1.43
MATR3-235ENST00000506147 HNRNPMP52272 730 aaKnown RBP eCLIP23.96■■□□□ 1.434e-9■■■■■ 28.9
MATR3-235ENST00000506147 CCDC141Q6ZP82 1450 aa23.95■■□□□ 1.42
MATR3-235ENST00000506147 ARHGEF12Q9NZN5 1544 aa23.94■■□□□ 1.42
MATR3-235ENST00000506147 SHANK2Q9UPX8 1470 aa23.94■■□□□ 1.42
MATR3-235ENST00000506147 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
MATR3-235ENST00000506147 TSPY4P0CV99 314 aa23.92■■□□□ 1.42
MATR3-235ENST00000506147 TSPY10P0CW01 314 aa23.92■■□□□ 1.42
MATR3-235ENST00000506147 PTPRKQ15262 1439 aa23.9■■□□□ 1.42
MATR3-235ENST00000506147 ROCK1Q13464 1354 aa23.9■■□□□ 1.42
MATR3-235ENST00000506147 DENND4BO75064 1496 aaPredicted RBP23.89■■□□□ 1.42
MATR3-235ENST00000506147 ZNF518AQ6AHZ1 1483 aa23.89■■□□□ 1.42
MATR3-235ENST00000506147 ITGAEP38570 1179 aa23.89■■□□□ 1.41
MATR3-235ENST00000506147 TRAPPC8Q9Y2L5 1435 aa23.89■■□□□ 1.41
MATR3-235ENST00000506147 POGZQ7Z3K3 1410 aa23.88■■□□□ 1.41
MATR3-235ENST00000506147 CROCC2H7BZ55 1655 aa23.87■■□□□ 1.41
MATR3-235ENST00000506147 MAST1Q9Y2H9 1570 aa23.86■■□□□ 1.41
MATR3-235ENST00000506147 RTEL1-TNFRSF6BF6WH68 1400 aa23.86■■□□□ 1.41
MATR3-235ENST00000506147 SOCS7O14512 581 aa23.86■■□□□ 1.41
MATR3-235ENST00000506147 C9orf84Q5VXU9 1444 aa23.85■■□□□ 1.41
MATR3-235ENST00000506147 ADGRL2O95490 1459 aa23.85■■□□□ 1.41
MATR3-235ENST00000506147 AFAP1Q8N556 730 aa23.84■■□□□ 1.41
MATR3-235ENST00000506147 KDM5CP41229 1560 aa23.83■■□□□ 1.41
MATR3-235ENST00000506147 ANKRD30AQ9BXX3 1397 aa23.82■■□□□ 1.4
MATR3-235ENST00000506147 ILDR2Q71H61 639 aa23.82■■□□□ 1.4
MATR3-235ENST00000506147 SPAG9O60271 1321 aaKnown RBP23.82■■□□□ 1.4
MATR3-235ENST00000506147 NCOA1Q15788 1441 aa23.81■■□□□ 1.4
MATR3-235ENST00000506147 MLH3Q9UHC1 1453 aa23.81■■□□□ 1.4
MATR3-235ENST00000506147 HFM1A2PYH4 1435 aa23.8■■□□□ 1.4
MATR3-235ENST00000506147 CHIC2Q9UKJ5 165 aa23.79■■□□□ 1.4
MATR3-235ENST00000506147 ADGBQ8N7X0 1667 aa23.78■■□□□ 1.4
MATR3-235ENST00000506147 RICTORQ6R327 1708 aa23.78■■□□□ 1.4
MATR3-235ENST00000506147 RAPGEF3O95398 923 aa23.77■■□□□ 1.4
MATR3-235ENST00000506147 MAGI2Q86UL8 1455 aa23.76■■□□□ 1.39
MATR3-235ENST00000506147 ZMYM4Q5VZL5 1548 aa23.75■■□□□ 1.39
MATR3-235ENST00000506147 ZFYVE16Q7Z3T8 1539 aa23.75■■□□□ 1.39
MATR3-235ENST00000506147 PLXNC1O60486 1568 aa23.75■■□□□ 1.39
MATR3-235ENST00000506147 INO80Q9ULG1 1556 aaPredicted RBP23.75■■□□□ 1.39
MATR3-235ENST00000506147 NAIPQ13075 1403 aa23.75■■□□□ 1.39
MATR3-235ENST00000506147 PTPRMP28827 1452 aa23.75■■□□□ 1.39
MATR3-235ENST00000506147 ATP7AQ04656 1500 aa23.74■■□□□ 1.39
MATR3-235ENST00000506147 HRCP23327 699 aa23.74■■□□□ 1.39
MATR3-235ENST00000506147 ACIN1Q9UKV3 1341 aaKnown RBP23.74■■□□□ 1.39
MATR3-235ENST00000506147 SETD5Q9C0A6 1442 aa23.74■■□□□ 1.39
MATR3-235ENST00000506147 FRMPD1Q5SYB0 1578 aa23.74■■□□□ 1.39
MATR3-235ENST00000506147 KIF15Q9NS87 1388 aa23.71■■□□□ 1.39
MATR3-235ENST00000506147 DISP3Q9P2K9 1392 aa23.71■■□□□ 1.39
MATR3-235ENST00000506147 RRP7BPQ9NSQ0 103 aa23.71■■□□□ 1.39
MATR3-235ENST00000506147 ADAMTSL3P82987 1691 aa23.7■■□□□ 1.39
MATR3-235ENST00000506147 GCC2Q8IWJ2 1684 aa23.69■■□□□ 1.38
MATR3-235ENST00000506147 KIDINS220Q9ULH0 1771 aa23.68■■□□□ 1.38
MATR3-235ENST00000506147 MYT1LQ9UL68 1186 aa23.68■■□□□ 1.38
MATR3-235ENST00000506147 DUOX2Q9NRD8 1548 aa23.67■■□□□ 1.38
MATR3-235ENST00000506147 ANKRD50Q9ULJ7 1429 aa23.65■■□□□ 1.38
MATR3-235ENST00000506147 ERBINQ96RT1 1412 aa23.64■■□□□ 1.37
MATR3-235ENST00000506147 DHX29Q7Z478 1369 aaKnown RBP23.64■■□□□ 1.37
MATR3-235ENST00000506147 RAB3GAP2Q9H2M9 1393 aa23.64■■□□□ 1.37
MATR3-235ENST00000506147 CERKQ8TCT0 537 aa23.6■■□□□ 1.37
MATR3-235ENST00000506147 A2MP01023 1474 aa23.6■■□□□ 1.37
MATR3-235ENST00000506147 DIP2CQ9Y2E4 1556 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms