RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 PLEKHD1A6NEE1 506 aa17.47■□□□□ 0.39
BRIX1-202ENST00000506023 FBXO41Q8TF61 875 aa17.47■□□□□ 0.39
BRIX1-202ENST00000506023 HSPA2P54652 639 aa17.45■□□□□ 0.38
BRIX1-202ENST00000506023 POGZQ7Z3K3 1410 aa17.45■□□□□ 0.38
BRIX1-202ENST00000506023 ARHGAP35Q9NRY4 1499 aa17.44■□□□□ 0.38
BRIX1-202ENST00000506023 PLCH2O75038 1416 aa17.43■□□□□ 0.38
BRIX1-202ENST00000506023 SCAPERQ9BY12 1400 aa17.42■□□□□ 0.38
BRIX1-202ENST00000506023 ARHGEF12Q9NZN5 1544 aa17.42■□□□□ 0.38
BRIX1-202ENST00000506023 PLPPR3Q6T4P5 718 aa17.41■□□□□ 0.38
BRIX1-202ENST00000506023 MAGI2Q86UL8 1455 aa17.41■□□□□ 0.38
BRIX1-202ENST00000506023 CDC42BPBQ9Y5S2 1711 aa17.41■□□□□ 0.38
BRIX1-202ENST00000506023 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
BRIX1-202ENST00000506023 PREX1Q8TCU6 1659 aa17.38■□□□□ 0.37
BRIX1-202ENST00000506023 KDM5CP41229 1560 aa17.37■□□□□ 0.37
BRIX1-202ENST00000506023 MLECQ14165 292 aa17.37■□□□□ 0.37
BRIX1-202ENST00000506023 STRCQ7RTU9 1775 aa17.37■□□□□ 0.37
BRIX1-202ENST00000506023 DIP2CQ9Y2E4 1556 aa17.36■□□□□ 0.37
BRIX1-202ENST00000506023 ABCA6Q8N139 1617 aa17.36■□□□□ 0.37
BRIX1-202ENST00000506023 ATP10AO60312 1499 aa17.35■□□□□ 0.37
BRIX1-202ENST00000506023 C9orf84Q5VXU9 1444 aa17.34■□□□□ 0.37
BRIX1-202ENST00000506023 FMN1Q68DA7 1419 aa17.32■□□□□ 0.36
BRIX1-202ENST00000506023 PREX2Q70Z35 1606 aa17.32■□□□□ 0.36
BRIX1-202ENST00000506023 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
BRIX1-202ENST00000506023 C3P01024 1663 aa17.31■□□□□ 0.36
BRIX1-202ENST00000506023 ITSN2Q9NZM3 1697 aa17.31■□□□□ 0.36
BRIX1-202ENST00000506023 ARHGAP5Q13017 1502 aa17.31■□□□□ 0.36
BRIX1-202ENST00000506023 CDC42BPAQ5VT25 1732 aa17.3■□□□□ 0.36
BRIX1-202ENST00000506023 CEBPAP49715 358 aaPredicted RBP17.3■□□□□ 0.36
BRIX1-202ENST00000506023 ATP1B4Q9UN42 357 aaPredicted RBP17.28■□□□□ 0.36
BRIX1-202ENST00000506023 ZNF518AQ6AHZ1 1483 aa17.28■□□□□ 0.36
BRIX1-202ENST00000506023 KIDINS220Q9ULH0 1771 aa17.28■□□□□ 0.36
BRIX1-202ENST00000506023 REREQ9P2R6 1566 aa17.28■□□□□ 0.36
BRIX1-202ENST00000506023 ABCC1P33527 1531 aa17.27■□□□□ 0.36
BRIX1-202ENST00000506023 UBTFP17480 764 aaKnown RBP17.27■□□□□ 0.36
BRIX1-202ENST00000506023 AFAP1Q8N556 730 aa17.27■□□□□ 0.36
BRIX1-202ENST00000506023 EFCAB2Q5VUJ9 269 aa17.26■□□□□ 0.35
BRIX1-202ENST00000506023 TRAPPC8Q9Y2L5 1435 aa17.25■□□□□ 0.35
BRIX1-202ENST00000506023 SETD1BQ9UPS6 1966 aaKnown RBP17.24■□□□□ 0.35
BRIX1-202ENST00000506023 CERKQ8TCT0 537 aa17.23■□□□□ 0.35
BRIX1-202ENST00000506023 MLH3Q9UHC1 1453 aa17.22■□□□□ 0.35
BRIX1-202ENST00000506023 AGLP35573 1532 aa17.2■□□□□ 0.34
BRIX1-202ENST00000506023 SAMD9LQ8IVG5 1584 aa17.19■□□□□ 0.34
BRIX1-202ENST00000506023 CLIP1P30622 1438 aa17.19■□□□□ 0.34
BRIX1-202ENST00000506023 CASKIN1Q8WXD9 1431 aa17.19■□□□□ 0.34
BRIX1-202ENST00000506023 MSH5O43196 834 aa17.18■□□□□ 0.34
BRIX1-202ENST00000506023 CDK11AQ9UQ88 783 aaPredicted RBP17.16■□□□□ 0.34
BRIX1-202ENST00000506023 UHRF1BP1Q6BDS2 1440 aa17.15■□□□□ 0.34
BRIX1-202ENST00000506023 CCDC18Q5T9S5 1454 aa17.15■□□□□ 0.34
BRIX1-202ENST00000506023 SUPT6HQ7KZ85 1726 aaKnown RBP17.15■□□□□ 0.34
BRIX1-202ENST00000506023 POTEDQ86YR6 584 aa17.14■□□□□ 0.33
BRIX1-202ENST00000506023 SYCP2Q9BX26 1530 aa17.14■□□□□ 0.33
BRIX1-202ENST00000506023 LTBP4Q8N2S1 1624 aa17.14■□□□□ 0.33
BRIX1-202ENST00000506023 MROH2AA6NES4 1674 aa17.13■□□□□ 0.33
BRIX1-202ENST00000506023 FYCO1Q9BQS8 1478 aa17.11■□□□□ 0.33
BRIX1-202ENST00000506023 INO80Q9ULG1 1556 aaPredicted RBP17.11■□□□□ 0.33
BRIX1-202ENST00000506023 CLTCQ00610 1675 aaKnown RBP17.1■□□□□ 0.33
BRIX1-202ENST00000506023 GPATCH8Q9UKJ3 1502 aaKnown RBP17.1■□□□□ 0.33
BRIX1-202ENST00000506023 PLXNC1O60486 1568 aa17.1■□□□□ 0.33
BRIX1-202ENST00000506023 MYT1LQ9UL68 1186 aa17.08■□□□□ 0.32
BRIX1-202ENST00000506023 PTPRTO14522 1441 aa17.07■□□□□ 0.32
BRIX1-202ENST00000506023 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
BRIX1-202ENST00000506023 NCOA1Q15788 1441 aa17.06■□□□□ 0.32
BRIX1-202ENST00000506023 ZNF142P52746 1687 aaPredicted RBP17.06■□□□□ 0.32
BRIX1-202ENST00000506023 CAMSAP1Q5T5Y3 1602 aa17.06■□□□□ 0.32
BRIX1-202ENST00000506023 MYO3AQ8NEV4 1616 aa17.06■□□□□ 0.32
BRIX1-202ENST00000506023 ILDR2Q71H61 639 aa17.05■□□□□ 0.32
BRIX1-202ENST00000506023 HNRNPMP52272 730 aaKnown RBP eCLIP17.02■□□□□ 0.32
BRIX1-202ENST00000506023 PIAS4Q8N2W9 510 aaPredicted RBP17.02■□□□□ 0.32
BRIX1-202ENST00000506023 ZNF777Q9ULD5 760 aaPredicted RBP17.02■□□□□ 0.32
BRIX1-202ENST00000506023 TIAM1Q13009 1591 aa17.02■□□□□ 0.31
BRIX1-202ENST00000506023 ADGBQ8N7X0 1667 aa17.01■□□□□ 0.31
BRIX1-202ENST00000506023 CNTLNQ9NXG0 1405 aa17.01■□□□□ 0.31
BRIX1-202ENST00000506023 NPATQ14207 1427 aa16.99■□□□□ 0.31
BRIX1-202ENST00000506023 DMRT2Q9Y5R5 561 aa16.99■□□□□ 0.31
BRIX1-202ENST00000506023 ZMYM3Q14202 1370 aa16.99■□□□□ 0.31
BRIX1-202ENST00000506023 SPATA31D1Q6ZQQ2 1576 aa16.98■□□□□ 0.31
BRIX1-202ENST00000506023 A2MP01023 1474 aa16.98■□□□□ 0.31
BRIX1-202ENST00000506023 CEP170BQ9Y4F5 1589 aaPredicted RBP16.98■□□□□ 0.31
BRIX1-202ENST00000506023 PTPRKQ15262 1439 aa16.97■□□□□ 0.31
BRIX1-202ENST00000506023 KIAA1107Q9UPP5 1409 aa16.97■□□□□ 0.31
BRIX1-202ENST00000506023 SPAG9O60271 1321 aaKnown RBP16.96■□□□□ 0.31
BRIX1-202ENST00000506023 DISP3Q9P2K9 1392 aa16.96■□□□□ 0.31
BRIX1-202ENST00000506023 ZNF644Q9H582 1327 aaPredicted RBP16.96■□□□□ 0.3
BRIX1-202ENST00000506023 MBD5Q9P267 1494 aa16.95■□□□□ 0.3
BRIX1-202ENST00000506023 NCKAP5LQ9HCH0 1330 aa16.95■□□□□ 0.3
BRIX1-202ENST00000506023 TCOF1Q13428 1488 aaKnown RBP16.94■□□□□ 0.3
BRIX1-202ENST00000506023 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
BRIX1-202ENST00000506023 ESF1Q9H501 851 aaKnown RBP16.93■□□□□ 0.3
BRIX1-202ENST00000506023 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
BRIX1-202ENST00000506023 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
BRIX1-202ENST00000506023 PLEKHH2Q8IVE3 1493 aa16.92■□□□□ 0.3
BRIX1-202ENST00000506023 DNMT1P26358 1616 aaKnown RBP16.92■□□□□ 0.3
BRIX1-202ENST00000506023 CCNB3Q8WWL7 1395 aa16.91■□□□□ 0.3
BRIX1-202ENST00000506023 PLA2R1Q13018 1463 aa16.91■□□□□ 0.3
BRIX1-202ENST00000506023 EHBP1L1Q8N3D4 1523 aa16.91■□□□□ 0.3
BRIX1-202ENST00000506023 POLR1AO95602 1720 aaPredicted RBP16.9■□□□□ 0.3
BRIX1-202ENST00000506023 NEURL4Q96JN8 1562 aa16.9■□□□□ 0.3
BRIX1-202ENST00000506023 CFDP1Q9UEE9 299 aaPredicted RBP16.9■□□□□ 0.3
BRIX1-202ENST00000506023 GGT6Q6P531 493 aa16.87■□□□□ 0.29
BRIX1-202ENST00000506023 MTUS2Q5JR59 1369 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms