RNA–Protein interactions for RNA: ENST00000505971.5

TRIO-207, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-207ENST00000505971 KIF14Q15058 1648 aa33.46■■■□□ 2.95
TRIO-207ENST00000505971 POGZQ7Z3K3 1410 aa33.45■■■□□ 2.95
TRIO-207ENST00000505971 ZFYVE16Q7Z3T8 1539 aa33.45■■■□□ 2.95
TRIO-207ENST00000505971 EFCAB2Q5VUJ9 269 aa33.45■■■□□ 2.95
TRIO-207ENST00000505971 SIGLEC1Q9BZZ2 1709 aa33.42■■■□□ 2.94
TRIO-207ENST00000505971 ILDR1Q86SU0 546 aaPredicted RBP33.41■■■□□ 2.94
TRIO-207ENST00000505971 CASKIN1Q8WXD9 1431 aa33.39■■■□□ 2.94
TRIO-207ENST00000505971 CLIP1P30622 1438 aa33.36■■■□□ 2.93
TRIO-207ENST00000505971 RIMS1Q86UR5 1692 aaKnown RBP33.34■■■□□ 2.93
TRIO-207ENST00000505971 PCF11O94913 1555 aaKnown RBP33.32■■■□□ 2.92
TRIO-207ENST00000505971 CCDC18Q5T9S5 1454 aa33.31■■■□□ 2.92
TRIO-207ENST00000505971 ATP10AO60312 1499 aa33.3■■■□□ 2.92
TRIO-207ENST00000505971 ARHGAP5Q13017 1502 aa33.29■■■□□ 2.92
TRIO-207ENST00000505971 CDC42BPBQ9Y5S2 1711 aa33.28■■■□□ 2.92
TRIO-207ENST00000505971 ZNF518AQ6AHZ1 1483 aa33.27■■■□□ 2.92
TRIO-207ENST00000505971 KDM5CP41229 1560 aa33.26■■■□□ 2.92
TRIO-207ENST00000505971 LMTK3Q96Q04 1460 aa33.26■■■□□ 2.92
TRIO-207ENST00000505971 C9orf84Q5VXU9 1444 aa33.23■■■□□ 2.91
TRIO-207ENST00000505971 AFAP1Q8N556 730 aa33.23■■■□□ 2.91
TRIO-207ENST00000505971 FYCO1Q9BQS8 1478 aa33.22■■■□□ 2.91
TRIO-207ENST00000505971 PREX2Q70Z35 1606 aa33.2■■■□□ 2.91
TRIO-207ENST00000505971 ARHGEF12Q9NZN5 1544 aa33.19■■■□□ 2.9
TRIO-207ENST00000505971 FER1L4A9Z1Z3 1794 aa33.18■■■□□ 2.9
TRIO-207ENST00000505971 MLECQ14165 292 aa33.17■■■□□ 2.9
TRIO-207ENST00000505971 MLH3Q9UHC1 1453 aa33.15■■■□□ 2.9
TRIO-207ENST00000505971 ABCC1P33527 1531 aa33.13■■■□□ 2.89
TRIO-207ENST00000505971 CDC42BPAQ5VT25 1732 aa33.13■■■□□ 2.89
TRIO-207ENST00000505971 REREQ9P2R6 1566 aa33.12■■■□□ 2.89
TRIO-207ENST00000505971 DIP2CQ9Y2E4 1556 aa33.11■■■□□ 2.89
TRIO-207ENST00000505971 TRAPPC8Q9Y2L5 1435 aa33.11■■■□□ 2.89
TRIO-207ENST00000505971 ITSN2Q9NZM3 1697 aa33.07■■■□□ 2.89
TRIO-207ENST00000505971 ABCA6Q8N139 1617 aa33.05■■■□□ 2.88
TRIO-207ENST00000505971 PLPPR3Q6T4P5 718 aa33.04■■■□□ 2.88
TRIO-207ENST00000505971 HSPA2P54652 639 aa33.03■■■□□ 2.88
TRIO-207ENST00000505971 GPATCH8Q9UKJ3 1502 aaKnown RBP33.02■■■□□ 2.88
TRIO-207ENST00000505971 AGLP35573 1532 aa33.01■■■□□ 2.87
TRIO-207ENST00000505971 KIDINS220Q9ULH0 1771 aa33■■■□□ 2.87
TRIO-207ENST00000505971 MYT1LQ9UL68 1186 aa32.99■■■□□ 2.87
TRIO-207ENST00000505971 SAMD9LQ8IVG5 1584 aa32.97■■■□□ 2.87
TRIO-207ENST00000505971 CEBPAP49715 358 aaPredicted RBP32.96■■■□□ 2.87
TRIO-207ENST00000505971 SETD1BQ9UPS6 1966 aaKnown RBP32.96■■■□□ 2.87
TRIO-207ENST00000505971 FBXO41Q8TF61 875 aa32.94■■■□□ 2.86
TRIO-207ENST00000505971 PREX1Q8TCU6 1659 aa32.92■■■□□ 2.86
TRIO-207ENST00000505971 ZNF777Q9ULD5 760 aaPredicted RBP32.9■■■□□ 2.86
TRIO-207ENST00000505971 KIAA1107Q9UPP5 1409 aa32.9■■■□□ 2.86
TRIO-207ENST00000505971 SYCP2Q9BX26 1530 aa32.88■■■□□ 2.85
TRIO-207ENST00000505971 HNRNPMP52272 730 aaKnown RBP eCLIP32.86■■■□□ 2.855e-7■■■□□ 17.6
TRIO-207ENST00000505971 CFDP1Q9UEE9 299 aaPredicted RBP32.86■■■□□ 2.85
TRIO-207ENST00000505971 MTUS2Q5JR59 1369 aa32.85■■■□□ 2.85
TRIO-207ENST00000505971 PLEKHH2Q8IVE3 1493 aa32.85■■■□□ 2.85
TRIO-207ENST00000505971 CCNB3Q8WWL7 1395 aa32.84■■■□□ 2.85
TRIO-207ENST00000505971 C3P01024 1663 aa32.83■■■□□ 2.85
TRIO-207ENST00000505971 SPAG9O60271 1321 aaKnown RBP32.82■■■□□ 2.84
TRIO-207ENST00000505971 CEP162Q5TB80 1403 aa32.82■■■□□ 2.84
TRIO-207ENST00000505971 ATP7AQ04656 1500 aa32.77■■■□□ 2.84
TRIO-207ENST00000505971 EHBP1L1Q8N3D4 1523 aa32.77■■■□□ 2.84
TRIO-207ENST00000505971 UHRF1BP1Q6BDS2 1440 aa32.77■■■□□ 2.84
TRIO-207ENST00000505971 CNTLNQ9NXG0 1405 aa32.77■■■□□ 2.84
TRIO-207ENST00000505971 INO80Q9ULG1 1556 aaPredicted RBP32.76■■■□□ 2.84
TRIO-207ENST00000505971 TIAM1Q13009 1591 aa32.75■■■□□ 2.83
TRIO-207ENST00000505971 STRCQ7RTU9 1775 aa32.74■■■□□ 2.83
TRIO-207ENST00000505971 ESF1Q9H501 851 aaKnown RBP32.74■■■□□ 2.83
TRIO-207ENST00000505971 PLXNC1O60486 1568 aa32.72■■■□□ 2.83
TRIO-207ENST00000505971 MBD5Q9P267 1494 aa32.71■■■□□ 2.83
TRIO-207ENST00000505971 ZNF644Q9H582 1327 aaPredicted RBP32.71■■■□□ 2.83
TRIO-207ENST00000505971 SUPT6HQ7KZ85 1726 aaKnown RBP32.69■■■□□ 2.82
TRIO-207ENST00000505971 MROH2AA6NES4 1674 aa32.69■■■□□ 2.82
TRIO-207ENST00000505971 A2MP01023 1474 aa32.68■■■□□ 2.82
TRIO-207ENST00000505971 CERKQ8TCT0 537 aa32.65■■■□□ 2.82
TRIO-207ENST00000505971 DMRT2Q9Y5R5 561 aa32.65■■■□□ 2.82
TRIO-207ENST00000505971 ZMYM3Q14202 1370 aa32.64■■■□□ 2.82
TRIO-207ENST00000505971 NPATQ14207 1427 aa32.62■■■□□ 2.81
TRIO-207ENST00000505971 RTEL1-TNFRSF6BF6WH68 1400 aa32.61■■■□□ 2.81
TRIO-207ENST00000505971 ADGBQ8N7X0 1667 aa32.61■■■□□ 2.81
TRIO-207ENST00000505971 NCOA2Q15596 1464 aa32.59■■■□□ 2.81
TRIO-207ENST00000505971 PPP6R1Q9UPN7 881 aa32.56■■■□□ 2.8
TRIO-207ENST00000505971 PTPRTO14522 1441 aa32.56■■■□□ 2.8
TRIO-207ENST00000505971 CLTCQ00610 1675 aaKnown RBP32.55■■■□□ 2.8
TRIO-207ENST00000505971 LOC105371045A0A1W2PR82 267 aa32.53■■■□□ 2.8
TRIO-207ENST00000505971 GGT6Q6P531 493 aa32.52■■■□□ 2.8
TRIO-207ENST00000505971 DHX29Q7Z478 1369 aaKnown RBP32.51■■■□□ 2.79
TRIO-207ENST00000505971 RSPH4AQ5TD94 716 aa32.51■■■□□ 2.79
TRIO-207ENST00000505971 NCOA1Q15788 1441 aa32.51■■■□□ 2.79
TRIO-207ENST00000505971 VPS8Q8N3P4 1428 aa32.51■■■□□ 2.79
TRIO-207ENST00000505971 PTPRKQ15262 1439 aa32.49■■■□□ 2.79
TRIO-207ENST00000505971 CAMSAP2Q08AD1 1489 aa32.48■■■□□ 2.79
TRIO-207ENST00000505971 CCDC141Q6ZP82 1450 aa32.48■■■□□ 2.79
TRIO-207ENST00000505971 LRRC9Q6ZRR7 1453 aa32.45■■■□□ 2.79
TRIO-207ENST00000505971 CAMSAP1Q5T5Y3 1602 aa32.42■■■□□ 2.78
TRIO-207ENST00000505971 MAP3K1Q13233 1512 aa32.41■■■□□ 2.78
TRIO-207ENST00000505971 ARHGEF5Q12774 1597 aa32.41■■■□□ 2.78
TRIO-207ENST00000505971 ZNF142P52746 1687 aaPredicted RBP32.4■■■□□ 2.78
TRIO-207ENST00000505971 MYO3AQ8NEV4 1616 aa32.39■■■□□ 2.78
TRIO-207ENST00000505971 LTBP4Q8N2S1 1624 aa32.37■■■□□ 2.77
TRIO-207ENST00000505971 KIF3BO15066 747 aa32.35■■■□□ 2.77
TRIO-207ENST00000505971 CEP170BQ9Y4F5 1589 aaPredicted RBP32.35■■■□□ 2.77
TRIO-207ENST00000505971 KANK4Q5T7N3 995 aaPredicted RBP32.34■■■□□ 2.77
TRIO-207ENST00000505971 PLA2R1Q13018 1463 aa32.34■■■□□ 2.77
TRIO-207ENST00000505971 FAM135AQ9P2D6 1515 aa32.33■■■□□ 2.77
TRIO-207ENST00000505971 TSPY4P0CV99 314 aa32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms