RNA–Protein interactions for RNA: ENST00000505905.1

LIN54-205, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN54, Length 810 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-205ENST00000505905 DOK7Q18PE1 504 aa16.65■□□□□ 0.26
LIN54-205ENST00000505905 FAM205CA6NFA0 338 aa16.64■□□□□ 0.25
LIN54-205ENST00000505905 KRTAP3-3Q9BYR6 98 aa16.61■□□□□ 0.25
LIN54-205ENST00000505905 KRTAP3-2Q9BYR7 98 aa16.61■□□□□ 0.25
LIN54-205ENST00000505905 ZNF710Q8N1W2 664 aa16.6■□□□□ 0.25
LIN54-205ENST00000505905 SPNS2Q8IVW8 549 aa16.59■□□□□ 0.25
LIN54-205ENST00000505905 ZSWIM6Q9HCJ5 1215 aa16.52■□□□□ 0.24
LIN54-205ENST00000505905 RIMBP2O15034 1052 aa16.51■□□□□ 0.23
LIN54-205ENST00000505905 MMRN1Q13201 1228 aa16.51■□□□□ 0.23
LIN54-205ENST00000505905 GPR153Q6NV75 609 aa16.51■□□□□ 0.23
LIN54-205ENST00000505905 KIF3CO14782 793 aa16.5■□□□□ 0.23
LIN54-205ENST00000505905 ERBB3P21860 1342 aa16.45■□□□□ 0.22
LIN54-205ENST00000505905 PPP1R37O75864 691 aa16.44■□□□□ 0.22
LIN54-205ENST00000505905 C2orf72A6NCS6 295 aa16.43■□□□□ 0.22
LIN54-205ENST00000505905 HS6ST3Q8IZP7 471 aa16.42■□□□□ 0.22
LIN54-205ENST00000505905 VARS2Q5ST30 1063 aaKnown RBP16.4■□□□□ 0.22
LIN54-205ENST00000505905 ARSIQ5FYB1 569 aa16.39■□□□□ 0.21
LIN54-205ENST00000505905 KHSRPQ92945 711 aaKnown RBP eCLIP16.36■□□□□ 0.215e-6■■■□□ 19
LIN54-205ENST00000505905 ZNF687Q8N1G0 1237 aa16.29■□□□□ 0.2
LIN54-205ENST00000505905 SLC34A2O95436 690 aa16.27■□□□□ 0.2
LIN54-205ENST00000505905 CHGAP10645 457 aaKnown RBP16.27■□□□□ 0.2
LIN54-205ENST00000505905 TMC2Q8TDI7 906 aa16.27■□□□□ 0.2
LIN54-205ENST00000505905 DNAJC5Q9H3Z4 198 aa16.27■□□□□ 0.2
LIN54-205ENST00000505905 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
LIN54-205ENST00000505905 NKX1-1Q15270 411 aaPredicted RBP16.26■□□□□ 0.19
LIN54-205ENST00000505905 PCDHGA4Q9Y5G9 962 aa16.21■□□□□ 0.19
LIN54-205ENST00000505905 NUDT7P0C024 238 aa16.19■□□□□ 0.18
LIN54-205ENST00000505905 KDM4FA0A1W2PPD8 638 aa16.13■□□□□ 0.17
LIN54-205ENST00000505905 FOXK1P85037 733 aa16.13■□□□□ 0.17
LIN54-205ENST00000505905 GPHNQ9NQX3 736 aaPredicted RBP16.13■□□□□ 0.17
LIN54-205ENST00000505905 LHX6Q9UPM6 363 aa16.12■□□□□ 0.17
LIN54-205ENST00000505905 DSG2Q14126 1118 aa16.08■□□□□ 0.16
LIN54-205ENST00000505905 POTEEQ6S8J3 1075 aa16.08■□□□□ 0.16
LIN54-205ENST00000505905 PLPP6Q8IY26 295 aa16.08■□□□□ 0.16
LIN54-205ENST00000505905 PTCD2Q8WV60 388 aaKnown RBP16.08■□□□□ 0.16
LIN54-205ENST00000505905 LSM11P83369 360 aaKnown RBP eCLIP16.03■□□□□ 0.16
LIN54-205ENST00000505905 RNF166Q96A37 237 aaPredicted RBP16.02■□□□□ 0.16
LIN54-205ENST00000505905 MYT1LQ9UL68 1186 aa16.02■□□□□ 0.16
LIN54-205ENST00000505905 PBX2P40425 430 aa16■□□□□ 0.15
LIN54-205ENST00000505905 CRISPLD2Q9H0B8 497 aa16■□□□□ 0.15
LIN54-205ENST00000505905 RYDENQ9NUL5 291 aaKnown RBP16■□□□□ 0.15
LIN54-205ENST00000505905 ANKRD13DQ6ZTN6 518 aa15.99■□□□□ 0.15
LIN54-205ENST00000505905 GTPBP6O43824 516 aaPredicted RBP15.98■□□□□ 0.15
LIN54-205ENST00000505905 AXIN2Q9Y2T1 843 aa15.97■□□□□ 0.15
LIN54-205ENST00000505905 PTGER2P43116 358 aa15.96■□□□□ 0.15
LIN54-205ENST00000505905 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
LIN54-205ENST00000505905 OXER1Q8TDS5 423 aa15.92■□□□□ 0.14
LIN54-205ENST00000505905 PSDA5PKW4 1024 aaPredicted RBP15.91■□□□□ 0.14
LIN54-205ENST00000505905 PPP1R15BQ5SWA1 713 aa15.87■□□□□ 0.13
LIN54-205ENST00000505905 ARHGAP33O14559 1287 aa15.86■□□□□ 0.13
LIN54-205ENST00000505905 TBC1D12O60347 775 aa15.85■□□□□ 0.13
LIN54-205ENST00000505905 UPF1Q92900 1129 aaKnown RBP eCLIP15.82■□□□□ 0.12
LIN54-205ENST00000505905 PDE4AP27815 886 aa15.8■□□□□ 0.12
LIN54-205ENST00000505905 DMRTA1Q5VZB9 504 aa15.8■□□□□ 0.12
LIN54-205ENST00000505905 PSEN2P49810 448 aa15.79■□□□□ 0.12
LIN54-205ENST00000505905 PPP4R3BQ5MIZ7 849 aa15.79■□□□□ 0.12
LIN54-205ENST00000505905 ADGRD1Q6QNK2 874 aa15.79■□□□□ 0.12
LIN54-205ENST00000505905 DCAF8L2P0C7V8 631 aa15.77■□□□□ 0.12
LIN54-205ENST00000505905 MFSD10Q14728 455 aa15.75■□□□□ 0.11
LIN54-205ENST00000505905 TK2O00142 265 aa15.74■□□□□ 0.11
LIN54-205ENST00000505905 HRO43593 1189 aa15.73■□□□□ 0.11
LIN54-205ENST00000505905 LARP6Q9BRS8 491 aaKnown RBP15.73■□□□□ 0.11
LIN54-205ENST00000505905 CADPS2Q86UW7 1296 aa15.72■□□□□ 0.11
LIN54-205ENST00000505905 DDX27Q96GQ7 796 aaKnown RBP15.71■□□□□ 0.11
LIN54-205ENST00000505905 ANO8Q9HCE9 1232 aaPredicted RBP15.7■□□□□ 0.1
LIN54-205ENST00000505905 FOSBP53539 338 aa15.69■□□□□ 0.1
LIN54-205ENST00000505905 KCNK17Q96T54 332 aa15.68■□□□□ 0.1
LIN54-205ENST00000505905 ZNF454Q8N9F8 522 aa15.67■□□□□ 0.1
LIN54-205ENST00000505905 EMILIN3Q9NT22 766 aa15.66■□□□□ 0.1
LIN54-205ENST00000505905 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
LIN54-205ENST00000505905 EVI5O60447 810 aa15.64■□□□□ 0.09
LIN54-205ENST00000505905 JPH4Q96JJ6 628 aa15.6■□□□□ 0.09
LIN54-205ENST00000505905 VPS9D1Q9Y2B5 631 aa15.59■□□□□ 0.09
LIN54-205ENST00000505905 SLC4A5Q9BY07 1137 aa15.56■□□□□ 0.08
LIN54-205ENST00000505905 HCSTQ9UBK5 93 aa15.56■□□□□ 0.08
LIN54-205ENST00000505905 KCNH8Q96L42 1107 aa15.55■□□□□ 0.08
LIN54-205ENST00000505905 MAP3K9P80192 1104 aa15.54■□□□□ 0.08
LIN54-205ENST00000505905 ADAM33Q9BZ11 813 aa15.54■□□□□ 0.08
LIN54-205ENST00000505905 CAMK2BQ13554 666 aa15.52■□□□□ 0.08
LIN54-205ENST00000505905 BBXQ8WY36 941 aaPredicted RBP15.52■□□□□ 0.08
LIN54-205ENST00000505905 ZDHHC16Q969W1 377 aa15.52■□□□□ 0.08
LIN54-205ENST00000505905 PTPREP23469 700 aa15.51■□□□□ 0.07
LIN54-205ENST00000505905 ZBED2Q9BTP6 218 aa15.51■□□□□ 0.07
LIN54-205ENST00000505905 PCDHGA10Q9Y5H3 936 aa15.49■□□□□ 0.07
LIN54-205ENST00000505905 BHMG1C9JSJ3 638 aaPredicted RBP15.48■□□□□ 0.07
LIN54-205ENST00000505905 KCTD12Q96CX2 325 aaKnown RBP15.48■□□□□ 0.07
LIN54-205ENST00000505905 PLA2G2EQ9NZK7 142 aa15.43■□□□□ 0.06
LIN54-205ENST00000505905 STAC3Q96MF2 364 aa15.41■□□□□ 0.06
LIN54-205ENST00000505905 DPYSL4O14531 572 aa15.39■□□□□ 0.05
LIN54-205ENST00000505905 PHF14O94880 888 aa15.38■□□□□ 0.05
LIN54-205ENST00000505905 RTN4Q9NQC3 1192 aaKnown RBP15.38■□□□□ 0.05
LIN54-205ENST00000505905 PPP1R3GB7ZBB8 358 aa15.37■□□□□ 0.05
LIN54-205ENST00000505905 COL9A1P20849 921 aa15.37■□□□□ 0.05
LIN54-205ENST00000505905 AMER1Q5JTC6 1135 aaPredicted RBP15.37■□□□□ 0.05
LIN54-205ENST00000505905 TYW1BQ6NUM6 668 aa15.37■□□□□ 0.05
LIN54-205ENST00000505905 FBXW7Q969H0 707 aa15.35■□□□□ 0.05
LIN54-205ENST00000505905 SPRYD3Q8NCJ5 442 aa15.33■□□□□ 0.04
LIN54-205ENST00000505905 PROX2Q3B8N5 592 aa15.32■□□□□ 0.04
LIN54-205ENST00000505905 THSD4Q6ZMP0 1018 aa15.32■□□□□ 0.04
LIN54-205ENST00000505905 MRPL50Q8N5N7 158 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms