RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 ARHGAP5Q13017 1502 aa35.85■■■■□ 3.33
SPOCK1-204ENST00000505690 CDC42BPBQ9Y5S2 1711 aa35.84■■■■□ 3.33
SPOCK1-204ENST00000505690 CCNB3Q8WWL7 1395 aa35.84■■■■□ 3.33
SPOCK1-204ENST00000505690 GPATCH8Q9UKJ3 1502 aaKnown RBP35.83■■■■□ 3.33
SPOCK1-204ENST00000505690 EFCAB2Q5VUJ9 269 aa35.82■■■■□ 3.32
SPOCK1-204ENST00000505690 AKNAQ7Z591 1439 aa35.82■■■■□ 3.32
SPOCK1-204ENST00000505690 COL17A1Q9UMD9 1497 aaPredicted RBP35.81■■■■□ 3.32
SPOCK1-204ENST00000505690 ITSN2Q9NZM3 1697 aa35.75■■■■□ 3.31
SPOCK1-204ENST00000505690 ADGRL1O94910 1474 aa35.72■■■■□ 3.31
SPOCK1-204ENST00000505690 CFDP1Q9UEE9 299 aaPredicted RBP35.71■■■■□ 3.31
SPOCK1-204ENST00000505690 DENND4BO75064 1496 aaPredicted RBP35.67■■■■□ 3.3
SPOCK1-204ENST00000505690 SCAPERQ9BY12 1400 aa35.66■■■■□ 3.3
SPOCK1-204ENST00000505690 ZNF777Q9ULD5 760 aaPredicted RBP35.65■■■■□ 3.3
SPOCK1-204ENST00000505690 SAMD9LQ8IVG5 1584 aa35.64■■■■□ 3.3
SPOCK1-204ENST00000505690 ABCC1P33527 1531 aa35.62■■■■□ 3.29
SPOCK1-204ENST00000505690 RAPGEF3O95398 923 aa35.62■■■■□ 3.29
SPOCK1-204ENST00000505690 FRMPD1Q5SYB0 1578 aa35.6■■■■□ 3.29
SPOCK1-204ENST00000505690 MYOM3Q5VTT5 1437 aa35.59■■■■□ 3.29
SPOCK1-204ENST00000505690 RICTORQ6R327 1708 aa35.59■■■■□ 3.29
SPOCK1-204ENST00000505690 POGZQ7Z3K3 1410 aa35.57■■■■□ 3.28
SPOCK1-204ENST00000505690 PLEKHH2Q8IVE3 1493 aa35.56■■■■□ 3.28
SPOCK1-204ENST00000505690 ARHGEF12Q9NZN5 1544 aa35.55■■■■□ 3.28
SPOCK1-204ENST00000505690 PPARGC1BQ86YN6 1023 aaKnown RBP35.53■■■■□ 3.28
SPOCK1-204ENST00000505690 ZNF644Q9H582 1327 aaPredicted RBP35.53■■■■□ 3.28
SPOCK1-204ENST00000505690 SYCP2Q9BX26 1530 aa35.52■■■■□ 3.28
SPOCK1-204ENST00000505690 MIA2Q96PC5 1412 aa35.52■■■■□ 3.28
SPOCK1-204ENST00000505690 KIAA1107Q9UPP5 1409 aa35.52■■■■□ 3.28
SPOCK1-204ENST00000505690 ZNF518AQ6AHZ1 1483 aa35.5■■■■□ 3.27
SPOCK1-204ENST00000505690 CAMSAP2Q08AD1 1489 aa35.49■■■■□ 3.27
SPOCK1-204ENST00000505690 TRAPPC8Q9Y2L5 1435 aa35.48■■■■□ 3.27
SPOCK1-204ENST00000505690 ZMYM4Q5VZL5 1548 aa35.47■■■■□ 3.27
SPOCK1-204ENST00000505690 HNRNPMP52272 730 aaKnown RBP eCLIP35.47■■■■□ 3.27
SPOCK1-204ENST00000505690 AFAP1Q8N556 730 aa35.46■■■■□ 3.27
SPOCK1-204ENST00000505690 KDM5CP41229 1560 aa35.44■■■■□ 3.26
SPOCK1-204ENST00000505690 FGD6Q6ZV73 1430 aa35.43■■■■□ 3.26
SPOCK1-204ENST00000505690 MBD5Q9P267 1494 aa35.41■■■■□ 3.26
SPOCK1-204ENST00000505690 PTPN23Q9H3S7 1636 aa35.39■■■■□ 3.26
SPOCK1-204ENST00000505690 MAGI2Q86UL8 1455 aa35.39■■■■□ 3.26
SPOCK1-204ENST00000505690 HECW2Q9P2P5 1572 aa35.35■■■■□ 3.25
SPOCK1-204ENST00000505690 ZFYVE16Q7Z3T8 1539 aa35.35■■■■□ 3.25
SPOCK1-204ENST00000505690 TCOF1Q13428 1488 aaKnown RBP35.34■■■■□ 3.25
SPOCK1-204ENST00000505690 ARHGEF40Q8TER5 1519 aa35.33■■■■□ 3.25
SPOCK1-204ENST00000505690 MLH3Q9UHC1 1453 aa35.33■■■■□ 3.25
SPOCK1-204ENST00000505690 ARHGEF5Q12774 1597 aa35.33■■■■□ 3.25
SPOCK1-204ENST00000505690 YEATS2Q9ULM3 1422 aa35.32■■■■□ 3.24
SPOCK1-204ENST00000505690 CCDC141Q6ZP82 1450 aa35.31■■■■□ 3.24
SPOCK1-204ENST00000505690 RSPH4AQ5TD94 716 aa35.31■■■■□ 3.24
SPOCK1-204ENST00000505690 MYT1LQ9UL68 1186 aa35.3■■■■□ 3.24
SPOCK1-204ENST00000505690 SPAG9O60271 1321 aaKnown RBP35.29■■■■□ 3.24
SPOCK1-204ENST00000505690 KIDINS220Q9ULH0 1771 aa35.25■■■■□ 3.23
SPOCK1-204ENST00000505690 INO80Q9ULG1 1556 aaPredicted RBP35.24■■■■□ 3.23
SPOCK1-204ENST00000505690 ATP7AQ04656 1500 aa35.22■■■■□ 3.23
SPOCK1-204ENST00000505690 FAM50AQ14320 339 aaKnown RBP35.21■■■■□ 3.23
SPOCK1-204ENST00000505690 DIP2CQ9Y2E4 1556 aa35.21■■■■□ 3.23
SPOCK1-204ENST00000505690 ATP10AO60312 1499 aa35.2■■■■□ 3.23
SPOCK1-204ENST00000505690 ABCA6Q8N139 1617 aa35.2■■■■□ 3.23
SPOCK1-204ENST00000505690 RTEL1-TNFRSF6BF6WH68 1400 aa35.18■■■■□ 3.22
SPOCK1-204ENST00000505690 TSPY4P0CV99 314 aa35.18■■■■□ 3.22
SPOCK1-204ENST00000505690 TSPY10P0CW01 314 aa35.18■■■■□ 3.22
SPOCK1-204ENST00000505690 DNMT1P26358 1616 aaKnown RBP35.17■■■■□ 3.22
SPOCK1-204ENST00000505690 ABCC5O15440 1437 aa35.15■■■■□ 3.22
SPOCK1-204ENST00000505690 C9orf84Q5VXU9 1444 aa35.15■■■■□ 3.22
SPOCK1-204ENST00000505690 DAPK1P53355 1430 aa35.15■■■■□ 3.22
SPOCK1-204ENST00000505690 MAST1Q9Y2H9 1570 aa35.13■■■■□ 3.21
SPOCK1-204ENST00000505690 CROCC2H7BZ55 1655 aa35.13■■■■□ 3.21
SPOCK1-204ENST00000505690 RRBP1Q9P2E9 1410 aaKnown RBP35.12■■■■□ 3.21
SPOCK1-204ENST00000505690 SHANK2Q9UPX8 1470 aa35.09■■■■□ 3.21
SPOCK1-204ENST00000505690 REREQ9P2R6 1566 aa35.09■■■■□ 3.21
SPOCK1-204ENST00000505690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.09■■■■□ 3.21
SPOCK1-204ENST00000505690 SIGLEC1Q9BZZ2 1709 aa35.07■■■■□ 3.2
SPOCK1-204ENST00000505690 ARID4BQ4LE39 1312 aaPredicted RBP35.06■■■■□ 3.2
SPOCK1-204ENST00000505690 ADGBQ8N7X0 1667 aa35.05■■■■□ 3.2
SPOCK1-204ENST00000505690 A2MP01023 1474 aa35.02■■■■□ 3.2
SPOCK1-204ENST00000505690 PLXNC1O60486 1568 aa35■■■■□ 3.19
SPOCK1-204ENST00000505690 AGLP35573 1532 aa34.97■■■■□ 3.19
SPOCK1-204ENST00000505690 CHIC2Q9UKJ5 165 aa34.96■■■■□ 3.19
SPOCK1-204ENST00000505690 BCORL1Q5H9F3 1711 aa34.95■■■■□ 3.18
SPOCK1-204ENST00000505690 DHX29Q7Z478 1369 aaKnown RBP34.94■■■■□ 3.18
SPOCK1-204ENST00000505690 PTPRKQ15262 1439 aa34.93■■■■□ 3.18
SPOCK1-204ENST00000505690 ADGRL2O95490 1459 aa34.91■■■■□ 3.18
SPOCK1-204ENST00000505690 ANKRD30AQ9BXX3 1397 aa34.91■■■■□ 3.18
SPOCK1-204ENST00000505690 ITGAEP38570 1179 aa34.91■■■■□ 3.18
SPOCK1-204ENST00000505690 KDM4FA0A1W2PPD8 638 aa34.9■■■■□ 3.18
SPOCK1-204ENST00000505690 KIF15Q9NS87 1388 aa34.88■■■■□ 3.17
SPOCK1-204ENST00000505690 MLECQ14165 292 aa34.88■■■■□ 3.17
SPOCK1-204ENST00000505690 RRP7BPQ9NSQ0 103 aa34.88■■■■□ 3.17
SPOCK1-204ENST00000505690 NCOA1Q15788 1441 aa34.88■■■■□ 3.17
SPOCK1-204ENST00000505690 DUOX2Q9NRD8 1548 aa34.86■■■■□ 3.17
SPOCK1-204ENST00000505690 ADAMTSL3P82987 1691 aa34.86■■■■□ 3.17
SPOCK1-204ENST00000505690 ROCK1Q13464 1354 aa34.81■■■■□ 3.16
SPOCK1-204ENST00000505690 MADDQ8WXG6 1647 aa34.79■■■■□ 3.16
SPOCK1-204ENST00000505690 EIF2AK4Q9P2K8 1649 aaKnown RBP34.77■■■■□ 3.16
SPOCK1-204ENST00000505690 KIF3BO15066 747 aa34.77■■■■□ 3.16
SPOCK1-204ENST00000505690 ERBINQ96RT1 1412 aa34.77■■■■□ 3.16
SPOCK1-204ENST00000505690 FER1L4A9Z1Z3 1794 aa34.74■■■■□ 3.15
SPOCK1-204ENST00000505690 GGT6Q6P531 493 aa34.73■■■■□ 3.15
SPOCK1-204ENST00000505690 RIMS1Q86UR5 1692 aaKnown RBP34.7■■■■□ 3.14
SPOCK1-204ENST00000505690 RNF17Q9BXT8 1623 aaKnown RBP34.68■■■■□ 3.14
SPOCK1-204ENST00000505690 ANKRD50Q9ULJ7 1429 aa34.67■■■■□ 3.14
SPOCK1-204ENST00000505690 ESF1Q9H501 851 aaKnown RBP34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms