RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 TRIM41Q8WV44 630 aa9.51□□□□□ -0.89
TRAPPC13-208ENST00000505553 SOX12O15370 315 aa9.5□□□□□ -0.89
TRAPPC13-208ENST00000505553 PLA2G2EQ9NZK7 142 aa9.49□□□□□ -0.89
TRAPPC13-208ENST00000505553 PBX2P40425 430 aa9.48□□□□□ -0.89
TRAPPC13-208ENST00000505553 HCSTQ9UBK5 93 aa9.47□□□□□ -0.89
TRAPPC13-208ENST00000505553 IFNLR1Q8IU57 520 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC13-208ENST00000505553 AMER1Q5JTC6 1135 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC13-208ENST00000505553 SLC24A1O60721 1099 aa9.4□□□□□ -0.9
TRAPPC13-208ENST00000505553 KHSRPQ92945 711 aaKnown RBP eCLIP9.4□□□□□ -0.95e-6■■■□□ 15.3
TRAPPC13-208ENST00000505553 MS4A4AQ96JQ5 239 aa9.39□□□□□ -0.91
TRAPPC13-208ENST00000505553 PHF8Q9UPP1 1060 aa9.38□□□□□ -0.91
TRAPPC13-208ENST00000505553 RIOK3O14730 519 aaKnown RBP9.34□□□□□ -0.91
TRAPPC13-208ENST00000505553 NUDT7P0C024 238 aa9.34□□□□□ -0.91
TRAPPC13-208ENST00000505553 VGFO15240 615 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC13-208ENST00000505553 NLRP6P59044 892 aa9.33□□□□□ -0.92
TRAPPC13-208ENST00000505553 RTN4Q9NQC3 1192 aaKnown RBP9.33□□□□□ -0.92
TRAPPC13-208ENST00000505553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC13-208ENST00000505553 ZFP91Q96JP5 570 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC13-208ENST00000505553 AXIN2Q9Y2T1 843 aa9.32□□□□□ -0.92
TRAPPC13-208ENST00000505553 ADGRD1Q6QNK2 874 aa9.31□□□□□ -0.92
TRAPPC13-208ENST00000505553 LHX6Q9UPM6 363 aa9.31□□□□□ -0.92
TRAPPC13-208ENST00000505553 PSDA5PKW4 1024 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC13-208ENST00000505553 POTEEQ6S8J3 1075 aa9.3□□□□□ -0.92
TRAPPC13-208ENST00000505553 ARHGAP33O14559 1287 aa9.29□□□□□ -0.92
TRAPPC13-208ENST00000505553 SLC34A2O95436 690 aa9.28□□□□□ -0.92
TRAPPC13-208ENST00000505553 PCDHGA4Q9Y5G9 962 aa9.28□□□□□ -0.92
TRAPPC13-208ENST00000505553 C2orf72A6NCS6 295 aa9.26□□□□□ -0.93
TRAPPC13-208ENST00000505553 TK2O00142 265 aa9.26□□□□□ -0.93
TRAPPC13-208ENST00000505553 KIF3CO14782 793 aa9.26□□□□□ -0.93
TRAPPC13-208ENST00000505553 TAOK2Q9UL54 1235 aa9.25□□□□□ -0.93
TRAPPC13-208ENST00000505553 RGS20O76081 388 aa9.24□□□□□ -0.93
TRAPPC13-208ENST00000505553 STAC3Q96MF2 364 aa9.24□□□□□ -0.93
TRAPPC13-208ENST00000505553 FBXO22Q8NEZ5 403 aa9.23□□□□□ -0.93
TRAPPC13-208ENST00000505553 RNF25Q96BH1 459 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC13-208ENST00000505553 TMC2Q8TDI7 906 aa9.21□□□□□ -0.94
TRAPPC13-208ENST00000505553 HRO43593 1189 aa9.2□□□□□ -0.94
TRAPPC13-208ENST00000505553 KCTD12Q96CX2 325 aaKnown RBP9.2□□□□□ -0.94
TRAPPC13-208ENST00000505553 IRX2Q9BZI1 471 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC13-208ENST00000505553 BCL11BQ9C0K0 894 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC13-208ENST00000505553 KCNH8Q96L42 1107 aa9.15□□□□□ -0.94
TRAPPC13-208ENST00000505553 STK24Q9Y6E0 443 aa9.15□□□□□ -0.94
TRAPPC13-208ENST00000505553 IFFO2Q5TF58 517 aa9.14□□□□□ -0.95
TRAPPC13-208ENST00000505553 DMRTA1Q5VZB9 504 aa9.14□□□□□ -0.95
TRAPPC13-208ENST00000505553 MFRPQ9BY79 579 aa9.14□□□□□ -0.95
TRAPPC13-208ENST00000505553 PSEN2P49810 448 aa9.14□□□□□ -0.95
TRAPPC13-208ENST00000505553 PPP4R3BQ5MIZ7 849 aa9.14□□□□□ -0.95
TRAPPC13-208ENST00000505553 PTPN5P54829 565 aa9.1□□□□□ -0.95
TRAPPC13-208ENST00000505553 PTCD2Q8WV60 388 aaKnown RBP9.09□□□□□ -0.95
TRAPPC13-208ENST00000505553 KDM4FA0A1W2PPD8 638 aa9.08□□□□□ -0.96
TRAPPC13-208ENST00000505553 A0A0G2JS52 829 aa9.06□□□□□ -0.96
TRAPPC13-208ENST00000505553 STK25O00506 426 aa9.06□□□□□ -0.96
TRAPPC13-208ENST00000505553 TBC1D12O60347 775 aa9.06□□□□□ -0.96
TRAPPC13-208ENST00000505553 KCNK17Q96T54 332 aa9.05□□□□□ -0.96
TRAPPC13-208ENST00000505553 VPS9D1Q9Y2B5 631 aa9.03□□□□□ -0.96
TRAPPC13-208ENST00000505553 GOLGA8CPA6NN73 597 aa9.02□□□□□ -0.97
TRAPPC13-208ENST00000505553 THSD4Q6ZMP0 1018 aa9□□□□□ -0.97
TRAPPC13-208ENST00000505553 SLC4A5Q9BY07 1137 aa8.99□□□□□ -0.97
TRAPPC13-208ENST00000505553 FOXK1P85037 733 aa8.98□□□□□ -0.97
TRAPPC13-208ENST00000505553 PLPP6Q8IY26 295 aa8.98□□□□□ -0.97
TRAPPC13-208ENST00000505553 WNT2BQ93097 391 aa8.97□□□□□ -0.97
TRAPPC13-208ENST00000505553 Q6ZNB5 142 aa8.96□□□□□ -0.98
TRAPPC13-208ENST00000505553 MRPL50Q8N5N7 158 aaKnown RBP8.95□□□□□ -0.98
TRAPPC13-208ENST00000505553 BCL2L12Q9HB09 334 aa8.94□□□□□ -0.98
TRAPPC13-208ENST00000505553 BHMG1C9JSJ3 638 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC13-208ENST00000505553 GPHNQ9NQX3 736 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC13-208ENST00000505553 PPP1R37O75864 691 aa8.92□□□□□ -0.98
TRAPPC13-208ENST00000505553 ZNF454Q8N9F8 522 aa8.92□□□□□ -0.98
TRAPPC13-208ENST00000505553 PTPREP23469 700 aa8.91□□□□□ -0.98
TRAPPC13-208ENST00000505553 NBPF3Q9H094 633 aa8.91□□□□□ -0.98
TRAPPC13-208ENST00000505553 ECM2O94769 699 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC13-208ENST00000505553 DSG2Q14126 1118 aa8.88□□□□□ -0.99
TRAPPC13-208ENST00000505553 ZBED2Q9BTP6 218 aa8.88□□□□□ -0.99
TRAPPC13-208ENST00000505553 LAPTM4AQ15012 233 aa8.87□□□□□ -0.99
TRAPPC13-208ENST00000505553 ITGBL1O95965 494 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC13-208ENST00000505553 OXER1Q8TDS5 423 aa8.85□□□□□ -0.99
TRAPPC13-208ENST00000505553 FOSBP53539 338 aa8.84□□□□□ -0.99
TRAPPC13-208ENST00000505553 ANKK1Q8NFD2 765 aa8.83□□□□□ -1
TRAPPC13-208ENST00000505553 UPF1Q92900 1129 aaKnown RBP eCLIP8.82□□□□□ -1
TRAPPC13-208ENST00000505553 NYAP1Q6ZVC0 841 aa8.8□□□□□ -1
TRAPPC13-208ENST00000505553 JPH4Q96JJ6 628 aa8.8□□□□□ -1
TRAPPC13-208ENST00000505553 PKD2Q13563 968 aa8.79□□□□□ -1
TRAPPC13-208ENST00000505553 ZDHHC16Q969W1 377 aa8.79□□□□□ -1
TRAPPC13-208ENST00000505553 RGL2O15211 777 aa8.78□□□□□ -1
TRAPPC13-208ENST00000505553 KCNC4Q03721 635 aa8.77□□□□□ -1.01
TRAPPC13-208ENST00000505553 TRAF7Q6Q0C0 670 aa8.77□□□□□ -1.01
TRAPPC13-208ENST00000505553 RABGEF1Q9UJ41 708 aa8.76□□□□□ -1.01
TRAPPC13-208ENST00000505553 ANO8Q9HCE9 1232 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC13-208ENST00000505553 ADAM33Q9BZ11 813 aa8.74□□□□□ -1.01
TRAPPC13-208ENST00000505553 LAPTM4BQ86VI4 370 aa8.73□□□□□ -1.01
TRAPPC13-208ENST00000505553 SOWAHBA6NEL2 793 aa8.72□□□□□ -1.01
TRAPPC13-208ENST00000505553 PPP1R3GB7ZBB8 358 aa8.72□□□□□ -1.01
TRAPPC13-208ENST00000505553 GFRA3O60609 400 aa8.72□□□□□ -1.01
TRAPPC13-208ENST00000505553 EVI5O60447 810 aa8.71□□□□□ -1.01
TRAPPC13-208ENST00000505553 BCAMP50895 628 aa8.71□□□□□ -1.01
TRAPPC13-208ENST00000505553 PPP1R15BQ5SWA1 713 aa8.71□□□□□ -1.01
TRAPPC13-208ENST00000505553 CRISPLD2Q9H0B8 497 aa8.68□□□□□ -1.02
TRAPPC13-208ENST00000505553 ZFRQ96KR1 1074 aaKnown RBP8.67□□□□□ -1.02
TRAPPC13-208ENST00000505553 WBP1LQ9NX94 342 aa8.67□□□□□ -1.02
TRAPPC13-208ENST00000505553 PROX2Q3B8N5 592 aa8.66□□□□□ -1.02
TRAPPC13-208ENST00000505553 RYDENQ9NUL5 291 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms