RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 PPP4R2Q9NY27 417 aa16.39■□□□□ 0.21
UBE3D-206ENST00000505226 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.21
UBE3D-206ENST00000505226 ANKRD30BQ9BXX2 1392 aa16.39■□□□□ 0.21
UBE3D-206ENST00000505226 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
UBE3D-206ENST00000505226 B4GALNT3Q6L9W6 998 aa16.37■□□□□ 0.21
UBE3D-206ENST00000505226 SPATA31E1Q6ZUB1 1445 aa16.37■□□□□ 0.21
UBE3D-206ENST00000505226 MIA2Q96PC5 1412 aa16.37■□□□□ 0.21
UBE3D-206ENST00000505226 KIF7Q2M1P5 1343 aa16.37■□□□□ 0.21
UBE3D-206ENST00000505226 TEX14Q8IWB6 1497 aa16.37■□□□□ 0.21
UBE3D-206ENST00000505226 ERICH6BQ5W0A0 696 aa16.36■□□□□ 0.21
UBE3D-206ENST00000505226 TARBP1Q13395 1621 aaKnown RBP16.36■□□□□ 0.21
UBE3D-206ENST00000505226 RPRD2Q5VT52 1461 aaKnown RBP16.36■□□□□ 0.21
UBE3D-206ENST00000505226 ZNF644Q9H582 1327 aaPredicted RBP16.36■□□□□ 0.21
UBE3D-206ENST00000505226 ZBED9Q6R2W3 1325 aa16.35■□□□□ 0.21
UBE3D-206ENST00000505226 WDR62O43379 1518 aa16.33■□□□□ 0.21
UBE3D-206ENST00000505226 DAPK1P53355 1430 aa16.33■□□□□ 0.2
UBE3D-206ENST00000505226 IQGAP2Q13576 1575 aa16.32■□□□□ 0.2
UBE3D-206ENST00000505226 ABCC5O15440 1437 aa16.32■□□□□ 0.2
UBE3D-206ENST00000505226 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
UBE3D-206ENST00000505226 ROCK1Q13464 1354 aa16.29■□□□□ 0.2
UBE3D-206ENST00000505226 SLC4A1APQ9BWU0 796 aaKnown RBP16.29■□□□□ 0.2
UBE3D-206ENST00000505226 PBRM1Q86U86 1689 aa16.28■□□□□ 0.2
UBE3D-206ENST00000505226 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
UBE3D-206ENST00000505226 POLR1AO95602 1720 aaPredicted RBP16.27■□□□□ 0.19
UBE3D-206ENST00000505226 DHX29Q7Z478 1369 aaKnown RBP16.27■□□□□ 0.19
UBE3D-206ENST00000505226 DNMT1P26358 1616 aaKnown RBP16.27■□□□□ 0.19
UBE3D-206ENST00000505226 SENP3-EIF4A1A0A087X0R7 540 aa16.25■□□□□ 0.19
UBE3D-206ENST00000505226 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
UBE3D-206ENST00000505226 PZPP20742 1482 aa16.24■□□□□ 0.19
UBE3D-206ENST00000505226 BCORL1Q5H9F3 1711 aa16.24■□□□□ 0.19
UBE3D-206ENST00000505226 ERICH6Q7L0X2 663 aa16.23■□□□□ 0.19
UBE3D-206ENST00000505226 NUP153P49790 1475 aaKnown RBP16.22■□□□□ 0.19
UBE3D-206ENST00000505226 SMG6Q86US8 1419 aaKnown RBP16.21■□□□□ 0.19
UBE3D-206ENST00000505226 MBD5Q9P267 1494 aa16.2■□□□□ 0.18
UBE3D-206ENST00000505226 DISP1Q96F81 1524 aa16.2■□□□□ 0.18
UBE3D-206ENST00000505226 POLR3GLQ9BT43 218 aa16.19■□□□□ 0.18
UBE3D-206ENST00000505226 USP47Q96K76 1375 aa16.18■□□□□ 0.18
UBE3D-206ENST00000505226 ZNF326Q5BKZ1 582 aaKnown RBP16.18■□□□□ 0.18
UBE3D-206ENST00000505226 RNF123Q5XPI4 1314 aa16.18■□□□□ 0.18
UBE3D-206ENST00000505226 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
UBE3D-206ENST00000505226 PAK3O75914 559 aaPredicted RBP16.16■□□□□ 0.18
UBE3D-206ENST00000505226 PRG4Q92954 1404 aaPredicted RBP16.16■□□□□ 0.18
UBE3D-206ENST00000505226 KIAA0556O60303 1618 aa16.16■□□□□ 0.18
UBE3D-206ENST00000505226 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.18
UBE3D-206ENST00000505226 PKD2Q13563 968 aa16.14■□□□□ 0.17
UBE3D-206ENST00000505226 PNISRQ8TF01 805 aaKnown RBP16.14■□□□□ 0.17
UBE3D-206ENST00000505226 CAMSAP2Q08AD1 1489 aa16.14■□□□□ 0.17
UBE3D-206ENST00000505226 KIAA1107Q9UPP5 1409 aa16.13■□□□□ 0.17
UBE3D-206ENST00000505226 KDM5CP41229 1560 aa16.13■□□□□ 0.17
UBE3D-206ENST00000505226 RAPGEF6Q8TEU7 1601 aa16.13■□□□□ 0.17
UBE3D-206ENST00000505226 CFDP1Q9UEE9 299 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-206ENST00000505226 KIAA0586Q9BVV6 1533 aa16.11■□□□□ 0.17
UBE3D-206ENST00000505226 ZNF777Q9ULD5 760 aaPredicted RBP16.11■□□□□ 0.17
UBE3D-206ENST00000505226 GPATCH8Q9UKJ3 1502 aaKnown RBP16.1■□□□□ 0.17
UBE3D-206ENST00000505226 NOP58Q9Y2X3 529 aaKnown RBP16.1■□□□□ 0.17
UBE3D-206ENST00000505226 CCDC136Q96JN2 1154 aa16.09■□□□□ 0.17
UBE3D-206ENST00000505226 KIF14Q15058 1648 aa16.09■□□□□ 0.17
UBE3D-206ENST00000505226 TROQ12816 1431 aaPredicted RBP16.08■□□□□ 0.17
UBE3D-206ENST00000505226 DEKP35659 375 aaKnown RBP16.07■□□□□ 0.16
UBE3D-206ENST00000505226 ADGBQ8N7X0 1667 aa16.07■□□□□ 0.16
UBE3D-206ENST00000505226 ADGRL2O95490 1459 aa16.07■□□□□ 0.16
UBE3D-206ENST00000505226 PLB1Q6P1J6 1458 aa16.07■□□□□ 0.16
UBE3D-206ENST00000505226 TMC1Q8TDI8 760 aa16.06■□□□□ 0.16
UBE3D-206ENST00000505226 NBR1Q14596 966 aa16.06■□□□□ 0.16
UBE3D-206ENST00000505226 ARID4BQ4LE39 1312 aaPredicted RBP16.05■□□□□ 0.16
UBE3D-206ENST00000505226 MRC2Q9UBG0 1479 aa16.05■□□□□ 0.16
UBE3D-206ENST00000505226 UHRF1BP1Q6BDS2 1440 aa16.05■□□□□ 0.16
UBE3D-206ENST00000505226 CROCC2H7BZ55 1655 aa16.04■□□□□ 0.16
UBE3D-206ENST00000505226 CARD11Q9BXL7 1154 aa16.04■□□□□ 0.16
UBE3D-206ENST00000505226 ANKRD50Q9ULJ7 1429 aa16.04■□□□□ 0.16
UBE3D-206ENST00000505226 ST20-MTHFSA0A0A6YYL1 179 aa16.04■□□□□ 0.16
UBE3D-206ENST00000505226 LRPPRCP42704 1394 aaKnown RBP16.04■□□□□ 0.16
UBE3D-206ENST00000505226 RALGAPBQ86X10 1494 aa16.04■□□□□ 0.16
UBE3D-206ENST00000505226 KDM2AQ9Y2K7 1162 aa16.02■□□□□ 0.16
UBE3D-206ENST00000505226 GRIN2AQ12879 1464 aa16.02■□□□□ 0.16
UBE3D-206ENST00000505226 ANKRD30AQ9BXX3 1397 aa16.02■□□□□ 0.15
UBE3D-206ENST00000505226 ITSN2Q9NZM3 1697 aa16.01■□□□□ 0.15
UBE3D-206ENST00000505226 NUP155O75694 1391 aa16.01■□□□□ 0.15
UBE3D-206ENST00000505226 IPO9Q96P70 1041 aaKnown RBP16■□□□□ 0.15
UBE3D-206ENST00000505226 KIF15Q9NS87 1388 aa16■□□□□ 0.15
UBE3D-206ENST00000505226 ROCK2O75116 1388 aaKnown RBP16■□□□□ 0.15
UBE3D-206ENST00000505226 IFT140Q96RY7 1462 aa15.99■□□□□ 0.15
UBE3D-206ENST00000505226 MYT1LQ9UL68 1186 aa15.99■□□□□ 0.15
UBE3D-206ENST00000505226 ADCY10Q96PN6 1610 aa15.98■□□□□ 0.15
UBE3D-206ENST00000505226 EXOC6Q8TAG9 804 aa15.98■□□□□ 0.15
UBE3D-206ENST00000505226 MYBBP1AQ9BQG0 1328 aaKnown RBP15.97■□□□□ 0.15
UBE3D-206ENST00000505226 DCAF11Q8TEB1 546 aa15.97■□□□□ 0.15
UBE3D-206ENST00000505226 SALL2Q9Y467 1007 aaPredicted RBP15.97■□□□□ 0.15
UBE3D-206ENST00000505226 BRD4O60885 1362 aaPredicted RBP15.96■□□□□ 0.15
UBE3D-206ENST00000505226 RRP1P56182 461 aaKnown RBP15.96■□□□□ 0.15
UBE3D-206ENST00000505226 CDC42BPAQ5VT25 1732 aa15.96■□□□□ 0.14
UBE3D-206ENST00000505226 ARHGEF12Q9NZN5 1544 aa15.95■□□□□ 0.14
UBE3D-206ENST00000505226 ANP32AP39687 249 aaKnown RBP15.95■□□□□ 0.14
UBE3D-206ENST00000505226 E9PCH4 1651 aa15.95■□□□□ 0.14
UBE3D-206ENST00000505226 C9orf84Q5VXU9 1444 aa15.95■□□□□ 0.14
UBE3D-206ENST00000505226 CEP170Q5SW79 1584 aa15.94■□□□□ 0.14
UBE3D-206ENST00000505226 EIF4G3O43432 1585 aaKnown RBP15.94■□□□□ 0.14
UBE3D-206ENST00000505226 RALBP1Q15311 655 aa15.93■□□□□ 0.14
UBE3D-206ENST00000505226 RCAN3Q9UKA8 241 aa15.92■□□□□ 0.14
UBE3D-206ENST00000505226 ABCC10Q5T3U5 1492 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms