RNA–Protein interactions for RNA: ENST00000505225.1

RERE-216, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-216ENST00000505225 DIP2CQ9Y2E4 1556 aa11.88□□□□□ -0.51
RERE-216ENST00000505225 ABCA6Q8N139 1617 aa11.88□□□□□ -0.51
RERE-216ENST00000505225 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
RERE-216ENST00000505225 C3P01024 1663 aa11.87□□□□□ -0.51
RERE-216ENST00000505225 ITSN2Q9NZM3 1697 aa11.87□□□□□ -0.51
RERE-216ENST00000505225 CSRNP3Q8WYN3 585 aa11.86□□□□□ -0.51
RERE-216ENST00000505225 PLCH2O75038 1416 aa11.85□□□□□ -0.51
RERE-216ENST00000505225 C9orf84Q5VXU9 1444 aa11.85□□□□□ -0.51
RERE-216ENST00000505225 CDC42BPAQ5VT25 1732 aa11.83□□□□□ -0.52
RERE-216ENST00000505225 ARHGAP35Q9NRY4 1499 aa11.83□□□□□ -0.52
RERE-216ENST00000505225 ABCC1P33527 1531 aa11.82□□□□□ -0.52
RERE-216ENST00000505225 ZNF518AQ6AHZ1 1483 aa11.82□□□□□ -0.52
RERE-216ENST00000505225 KIDINS220Q9ULH0 1771 aa11.82□□□□□ -0.52
RERE-216ENST00000505225 ATP10AO60312 1499 aa11.81□□□□□ -0.52
RERE-216ENST00000505225 SETD1BQ9UPS6 1966 aaKnown RBP11.81□□□□□ -0.52
RERE-216ENST00000505225 MROH2AA6NES4 1674 aa11.81□□□□□ -0.52
RERE-216ENST00000505225 SCAPERQ9BY12 1400 aa11.8□□□□□ -0.52
RERE-216ENST00000505225 AGLP35573 1532 aa11.79□□□□□ -0.52
RERE-216ENST00000505225 ARID4BQ4LE39 1312 aaPredicted RBP11.79□□□□□ -0.52
RERE-216ENST00000505225 FMN1Q68DA7 1419 aa11.78□□□□□ -0.52
RERE-216ENST00000505225 ZNF142P52746 1687 aaPredicted RBP11.78□□□□□ -0.52
RERE-216ENST00000505225 FAM9AQ8IZU1 332 aaPredicted RBP11.78□□□□□ -0.52
RERE-216ENST00000505225 TROQ12816 1431 aaPredicted RBP11.77□□□□□ -0.52
RERE-216ENST00000505225 ARHGAP5Q13017 1502 aa11.77□□□□□ -0.52
RERE-216ENST00000505225 PLEKHD1A6NEE1 506 aa11.77□□□□□ -0.53
RERE-216ENST00000505225 HSPA2P54652 639 aa11.77□□□□□ -0.53
RERE-216ENST00000505225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.76□□□□□ -0.53
RERE-216ENST00000505225 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
RERE-216ENST00000505225 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
RERE-216ENST00000505225 LTBP4Q8N2S1 1624 aa11.75□□□□□ -0.53
RERE-216ENST00000505225 PLXNC1O60486 1568 aa11.74□□□□□ -0.53
RERE-216ENST00000505225 INO80Q9ULG1 1556 aaPredicted RBP11.74□□□□□ -0.53
RERE-216ENST00000505225 SAMD9LQ8IVG5 1584 aa11.73□□□□□ -0.53
RERE-216ENST00000505225 MYO3AQ8NEV4 1616 aa11.72□□□□□ -0.53
RERE-216ENST00000505225 SPATA31D1Q6ZQQ2 1576 aa11.72□□□□□ -0.53
RERE-216ENST00000505225 SUPT6HQ7KZ85 1726 aaKnown RBP11.72□□□□□ -0.53
RERE-216ENST00000505225 UHRF1BP1Q6BDS2 1440 aa11.71□□□□□ -0.53
RERE-216ENST00000505225 CCDC18Q5T9S5 1454 aa11.7□□□□□ -0.54
RERE-216ENST00000505225 CERKQ8TCT0 537 aa11.7□□□□□ -0.54
RERE-216ENST00000505225 IQSEC2Q5JU85 1478 aa11.7□□□□□ -0.54
RERE-216ENST00000505225 CLIP1P30622 1438 aa11.69□□□□□ -0.54
RERE-216ENST00000505225 CLTCQ00610 1675 aaKnown RBP11.69□□□□□ -0.54
RERE-216ENST00000505225 RANGAP1P46060 587 aaPredicted RBP11.69□□□□□ -0.54
RERE-216ENST00000505225 PTPRTO14522 1441 aa11.69□□□□□ -0.54
RERE-216ENST00000505225 TRAPPC8Q9Y2L5 1435 aa11.69□□□□□ -0.54
RERE-216ENST00000505225 SYCP2Q9BX26 1530 aa11.68□□□□□ -0.54
RERE-216ENST00000505225 NCOA1Q15788 1441 aa11.68□□□□□ -0.54
RERE-216ENST00000505225 FYCO1Q9BQS8 1478 aa11.67□□□□□ -0.54
RERE-216ENST00000505225 ADGBQ8N7X0 1667 aa11.67□□□□□ -0.54
RERE-216ENST00000505225 CASKIN1Q8WXD9 1431 aa11.67□□□□□ -0.54
RERE-216ENST00000505225 MLECQ14165 292 aa11.66□□□□□ -0.54
RERE-216ENST00000505225 EFCAB2Q5VUJ9 269 aa11.66□□□□□ -0.54
RERE-216ENST00000505225 POLR1AO95602 1720 aaPredicted RBP11.66□□□□□ -0.54
RERE-216ENST00000505225 ATP7AQ04656 1500 aa11.65□□□□□ -0.54
RERE-216ENST00000505225 CAMSAP1Q5T5Y3 1602 aa11.65□□□□□ -0.54
RERE-216ENST00000505225 CEP170BQ9Y4F5 1589 aaPredicted RBP11.64□□□□□ -0.55
RERE-216ENST00000505225 CNTLNQ9NXG0 1405 aa11.64□□□□□ -0.55
RERE-216ENST00000505225 NPATQ14207 1427 aa11.63□□□□□ -0.55
RERE-216ENST00000505225 CEBPAP49715 358 aaPredicted RBP11.63□□□□□ -0.55
RERE-216ENST00000505225 PLPPR3Q6T4P5 718 aa11.62□□□□□ -0.55
RERE-216ENST00000505225 AFAP1Q8N556 730 aa11.62□□□□□ -0.55
RERE-216ENST00000505225 PLA2R1Q13018 1463 aa11.61□□□□□ -0.55
RERE-216ENST00000505225 TIAM1Q13009 1591 aa11.61□□□□□ -0.55
RERE-216ENST00000505225 TCOF1Q13428 1488 aaKnown RBP11.6□□□□□ -0.55
RERE-216ENST00000505225 GPATCH8Q9UKJ3 1502 aaKnown RBP11.6□□□□□ -0.55
RERE-216ENST00000505225 NEURL4Q96JN8 1562 aa11.59□□□□□ -0.55
RERE-216ENST00000505225 CDK11AQ9UQ88 783 aaPredicted RBP11.59□□□□□ -0.55
RERE-216ENST00000505225 SOCS7O14512 581 aa11.58□□□□□ -0.56
RERE-216ENST00000505225 DNMT1P26358 1616 aaKnown RBP11.57□□□□□ -0.56
RERE-216ENST00000505225 ILDR2Q71H61 639 aa11.57□□□□□ -0.56
RERE-216ENST00000505225 FAM135AQ9P2D6 1515 aa11.56□□□□□ -0.56
RERE-216ENST00000505225 DMRT2Q9Y5R5 561 aa11.56□□□□□ -0.56
RERE-216ENST00000505225 PTPRKQ15262 1439 aa11.55□□□□□ -0.56
RERE-216ENST00000505225 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
RERE-216ENST00000505225 A2MP01023 1474 aa11.55□□□□□ -0.56
RERE-216ENST00000505225 PLEKHH2Q8IVE3 1493 aa11.55□□□□□ -0.56
RERE-216ENST00000505225 EHBP1L1Q8N3D4 1523 aa11.55□□□□□ -0.56
RERE-216ENST00000505225 DISP3Q9P2K9 1392 aa11.54□□□□□ -0.56
RERE-216ENST00000505225 UBTFP17480 764 aaKnown RBP11.53□□□□□ -0.56
RERE-216ENST00000505225 ALKQ9UM73 1620 aa11.53□□□□□ -0.56
RERE-216ENST00000505225 MBD5Q9P267 1494 aa11.51□□□□□ -0.57
RERE-216ENST00000505225 RNF17Q9BXT8 1623 aaKnown RBP11.51□□□□□ -0.57
RERE-216ENST00000505225 ZMYM3Q14202 1370 aa11.51□□□□□ -0.57
RERE-216ENST00000505225 A2ML1A8K2U0 1454 aa11.51□□□□□ -0.57
RERE-216ENST00000505225 KDM5DQ9BY66 1539 aa11.5□□□□□ -0.57
RERE-216ENST00000505225 DEPDC5O75140 1603 aa11.5□□□□□ -0.57
RERE-216ENST00000505225 ZC3H13Q5T200 1668 aaKnown RBP11.5□□□□□ -0.57
RERE-216ENST00000505225 STRCP1A6NGW2 1772 aa11.5□□□□□ -0.57
RERE-216ENST00000505225 ATP1B4Q9UN42 357 aaPredicted RBP11.5□□□□□ -0.57
RERE-216ENST00000505225 VWDEQ8N2E2 1590 aa11.5□□□□□ -0.57
RERE-216ENST00000505225 MED1Q15648 1581 aaPredicted RBP11.49□□□□□ -0.57
RERE-216ENST00000505225 MROH1Q8NDA8 1641 aa11.47□□□□□ -0.57
RERE-216ENST00000505225 SYNMO15061 1565 aa11.47□□□□□ -0.57
RERE-216ENST00000505225 ARHGEF5Q12774 1597 aa11.47□□□□□ -0.57
RERE-216ENST00000505225 PZPP20742 1482 aa11.47□□□□□ -0.57
RERE-216ENST00000505225 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
RERE-216ENST00000505225 IQGAP1P46940 1657 aa11.46□□□□□ -0.57
RERE-216ENST00000505225 EIF2AK4Q9P2K8 1649 aaKnown RBP11.46□□□□□ -0.57
RERE-216ENST00000505225 CPS1P31327 1500 aa11.46□□□□□ -0.57
RERE-216ENST00000505225 RTEL1-TNFRSF6BF6WH68 1400 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms