RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 SLAIN1Q8ND83 568 aa9.91□□□□□ -0.82
LINC01088-202ENST00000505149 KIF3CO14782 793 aa9.9□□□□□ -0.82
LINC01088-202ENST00000505149 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.82
LINC01088-202ENST00000505149 PAXIP1Q6ZW49 1069 aaPredicted RBP9.9□□□□□ -0.82
LINC01088-202ENST00000505149 FAM163AQ96GL9 167 aaPredicted RBP9.87□□□□□ -0.83
LINC01088-202ENST00000505149 CFAP44Q96MT7 982 aa9.86□□□□□ -0.83
LINC01088-202ENST00000505149 PLCB2Q00722 1185 aa9.85□□□□□ -0.83
LINC01088-202ENST00000505149 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
LINC01088-202ENST00000505149 GPHNQ9NQX3 736 aaPredicted RBP9.85□□□□□ -0.83
LINC01088-202ENST00000505149 SNPHO15079 494 aa9.83□□□□□ -0.84
LINC01088-202ENST00000505149 CDAN1Q8IWY9 1227 aa9.83□□□□□ -0.84
LINC01088-202ENST00000505149 C2orf72A6NCS6 295 aa9.82□□□□□ -0.84
LINC01088-202ENST00000505149 TMC2Q8TDI7 906 aa9.82□□□□□ -0.84
LINC01088-202ENST00000505149 FOXK1P85037 733 aa9.81□□□□□ -0.84
LINC01088-202ENST00000505149 NCKAP5LQ9HCH0 1330 aa9.81□□□□□ -0.84
LINC01088-202ENST00000505149 PDE4AP27815 886 aa9.8□□□□□ -0.84
LINC01088-202ENST00000505149 MMRN1Q13201 1228 aa9.79□□□□□ -0.84
LINC01088-202ENST00000505149 MFSD10Q14728 455 aa9.79□□□□□ -0.84
LINC01088-202ENST00000505149 CADPS2Q86UW7 1296 aa9.78□□□□□ -0.84
LINC01088-202ENST00000505149 SLC34A2O95436 690 aa9.76□□□□□ -0.85
LINC01088-202ENST00000505149 HOXB3P14651 431 aaPredicted RBP9.76□□□□□ -0.85
LINC01088-202ENST00000505149 DOK7Q18PE1 504 aa9.75□□□□□ -0.85
LINC01088-202ENST00000505149 DSG2Q14126 1118 aa9.74□□□□□ -0.85
LINC01088-202ENST00000505149 ZSWIM6Q9HCJ5 1215 aa9.74□□□□□ -0.85
LINC01088-202ENST00000505149 DDX27Q96GQ7 796 aaKnown RBP9.72□□□□□ -0.85
LINC01088-202ENST00000505149 PPP1R15BQ5SWA1 713 aa9.71□□□□□ -0.86
LINC01088-202ENST00000505149 PLPP6Q8IY26 295 aa9.71□□□□□ -0.86
LINC01088-202ENST00000505149 LARP6Q9BRS8 491 aaKnown RBP9.71□□□□□ -0.86
LINC01088-202ENST00000505149 TSHZ2Q9NRE2 1034 aa9.71□□□□□ -0.86
LINC01088-202ENST00000505149 RIMBP2O15034 1052 aa9.7□□□□□ -0.86
LINC01088-202ENST00000505149 ST18O60284 1047 aa9.68□□□□□ -0.86
LINC01088-202ENST00000505149 PTCD2Q8WV60 388 aaKnown RBP9.68□□□□□ -0.86
LINC01088-202ENST00000505149 CAMK2BQ13554 666 aa9.67□□□□□ -0.86
LINC01088-202ENST00000505149 HOXB1P14653 301 aaPredicted RBP9.66□□□□□ -0.86
LINC01088-202ENST00000505149 GPR153Q6NV75 609 aa9.65□□□□□ -0.86
LINC01088-202ENST00000505149 SPNS2Q8IVW8 549 aa9.65□□□□□ -0.86
LINC01088-202ENST00000505149 ZNF710Q8N1W2 664 aa9.65□□□□□ -0.86
LINC01088-202ENST00000505149 OXER1Q8TDS5 423 aa9.63□□□□□ -0.87
LINC01088-202ENST00000505149 PCDHGA4Q9Y5G9 962 aa9.61□□□□□ -0.87
LINC01088-202ENST00000505149 KDM4FA0A1W2PPD8 638 aa9.6□□□□□ -0.87
LINC01088-202ENST00000505149 WDR70Q9NW82 654 aa9.6□□□□□ -0.87
LINC01088-202ENST00000505149 ARIH1Q9Y4X5 557 aaPredicted RBP9.6□□□□□ -0.87
LINC01088-202ENST00000505149 TBC1D12O60347 775 aa9.59□□□□□ -0.87
LINC01088-202ENST00000505149 HAP1P54257 671 aaPredicted RBP9.59□□□□□ -0.87
LINC01088-202ENST00000505149 E2F4Q16254 413 aa9.58□□□□□ -0.88
LINC01088-202ENST00000505149 EMILIN3Q9NT22 766 aa9.58□□□□□ -0.88
LINC01088-202ENST00000505149 ARSIQ5FYB1 569 aa9.57□□□□□ -0.88
LINC01088-202ENST00000505149 VSIG10Q8N0Z9 540 aa9.57□□□□□ -0.88
LINC01088-202ENST00000505149 EMP3P54852 163 aa9.53□□□□□ -0.88
LINC01088-202ENST00000505149 ANO8Q9HCE9 1232 aaPredicted RBP9.53□□□□□ -0.88
LINC01088-202ENST00000505149 NUDT7P0C024 238 aa9.51□□□□□ -0.89
LINC01088-202ENST00000505149 UPF1Q92900 1129 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC01088-202ENST00000505149 KHSRPQ92945 711 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC01088-202ENST00000505149 MARVELD3Q96A59 401 aa9.51□□□□□ -0.89
LINC01088-202ENST00000505149 KDM2AQ9Y2K7 1162 aa9.51□□□□□ -0.89
LINC01088-202ENST00000505149 PSDA5PKW4 1024 aaPredicted RBP9.5□□□□□ -0.89
LINC01088-202ENST00000505149 ZNF316A6NFI3 1004 aaPredicted RBP9.5□□□□□ -0.89
LINC01088-202ENST00000505149 MAP3K9P80192 1104 aa9.5□□□□□ -0.89
LINC01088-202ENST00000505149 P3H3Q8IVL6 736 aa9.5□□□□□ -0.89
LINC01088-202ENST00000505149 ARHGEF1Q92888 912 aaKnown RBP9.49□□□□□ -0.89
LINC01088-202ENST00000505149 SPDYE16A6NNV3 312 aaPredicted RBP9.48□□□□□ -0.89
LINC01088-202ENST00000505149 PDIA6Q15084 440 aa9.48□□□□□ -0.89
LINC01088-202ENST00000505149 DPYSL4O14531 572 aa9.47□□□□□ -0.89
LINC01088-202ENST00000505149 EVI5O60447 810 aa9.47□□□□□ -0.89
LINC01088-202ENST00000505149 KCNV2Q8TDN2 545 aa9.47□□□□□ -0.89
LINC01088-202ENST00000505149 ERBB3P21860 1342 aa9.47□□□□□ -0.89
LINC01088-202ENST00000505149 PTGER2P43116 358 aa9.46□□□□□ -0.9
LINC01088-202ENST00000505149 HS3ST6Q96QI5 342 aa9.46□□□□□ -0.9
LINC01088-202ENST00000505149 LHX6Q9UPM6 363 aa9.46□□□□□ -0.9
LINC01088-202ENST00000505149 FAM205CA6NFA0 338 aa9.45□□□□□ -0.9
LINC01088-202ENST00000505149 POTEB3A0JP26 581 aa9.44□□□□□ -0.9
LINC01088-202ENST00000505149 POTEBQ6S5H4 581 aa9.44□□□□□ -0.9
LINC01088-202ENST00000505149 VARS2Q5ST30 1063 aaKnown RBP9.43□□□□□ -0.9
LINC01088-202ENST00000505149 ZNF687Q8N1G0 1237 aa9.43□□□□□ -0.9
LINC01088-202ENST00000505149 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
LINC01088-202ENST00000505149 FOSBP53539 338 aa9.41□□□□□ -0.9
LINC01088-202ENST00000505149 PHF14O94880 888 aa9.39□□□□□ -0.91
LINC01088-202ENST00000505149 PPP4R3BQ5MIZ7 849 aa9.39□□□□□ -0.91
LINC01088-202ENST00000505149 PBX2P40425 430 aa9.38□□□□□ -0.91
LINC01088-202ENST00000505149 FBXW7Q969H0 707 aa9.36□□□□□ -0.91
LINC01088-202ENST00000505149 EPAS1Q99814 870 aa9.36□□□□□ -0.91
LINC01088-202ENST00000505149 SLC24A1O60721 1099 aa9.35□□□□□ -0.91
LINC01088-202ENST00000505149 ZNF454Q8N9F8 522 aa9.35□□□□□ -0.91
LINC01088-202ENST00000505149 BCL2L12Q9HB09 334 aa9.35□□□□□ -0.91
LINC01088-202ENST00000505149 PCDHGA10Q9Y5H3 936 aa9.35□□□□□ -0.91
LINC01088-202ENST00000505149 TYW1BQ6NUM6 668 aa9.34□□□□□ -0.91
LINC01088-202ENST00000505149 ZDHHC16Q969W1 377 aa9.34□□□□□ -0.91
LINC01088-202ENST00000505149 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
LINC01088-202ENST00000505149 KRTAP3-2Q9BYR7 98 aa9.33□□□□□ -0.92
LINC01088-202ENST00000505149 POTEEQ6S8J3 1075 aa9.32□□□□□ -0.92
LINC01088-202ENST00000505149 ARHGAP33O14559 1287 aa9.31□□□□□ -0.92
LINC01088-202ENST00000505149 DDX12PQ92771 950 aa9.29□□□□□ -0.92
LINC01088-202ENST00000505149 EN1Q05925 392 aaPredicted RBP9.28□□□□□ -0.92
LINC01088-202ENST00000505149 ADAM33Q9BZ11 813 aa9.28□□□□□ -0.92
LINC01088-202ENST00000505149 TESPA1A2RU30 521 aaPredicted RBP9.27□□□□□ -0.93
LINC01088-202ENST00000505149 OSBPP22059 807 aa9.27□□□□□ -0.93
LINC01088-202ENST00000505149 SLC4A5Q9BY07 1137 aa9.27□□□□□ -0.93
LINC01088-202ENST00000505149 SEMA3EO15041 775 aa9.26□□□□□ -0.93
LINC01088-202ENST00000505149 PTPREP23469 700 aa9.26□□□□□ -0.93
LINC01088-202ENST00000505149 LSM11P83369 360 aaKnown RBP eCLIP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms