RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 ARHGAP5Q13017 1502 aa15.89■□□□□ 0.13
RFC1-210ENST00000505077 PLCH2O75038 1416 aa15.88■□□□□ 0.13
RFC1-210ENST00000505077 CD109Q6YHK3 1445 aa15.88■□□□□ 0.13
RFC1-210ENST00000505077 KCNH8Q96L42 1107 aa15.88■□□□□ 0.13
RFC1-210ENST00000505077 MIA2Q96PC5 1412 aa15.87■□□□□ 0.13
RFC1-210ENST00000505077 PTPN23Q9H3S7 1636 aa15.86■□□□□ 0.13
RFC1-210ENST00000505077 NEO1Q92859 1461 aa15.85■□□□□ 0.13
RFC1-210ENST00000505077 FAM69CQ0P6D2 419 aa15.85■□□□□ 0.13
RFC1-210ENST00000505077 FANCAO15360 1455 aa15.84■□□□□ 0.13
RFC1-210ENST00000505077 SAMD9LQ8IVG5 1584 aa15.84■□□□□ 0.13
RFC1-210ENST00000505077 PHLDB1Q86UU1 1377 aa15.84■□□□□ 0.13
RFC1-210ENST00000505077 FGD6Q6ZV73 1430 aa15.84■□□□□ 0.13
RFC1-210ENST00000505077 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
RFC1-210ENST00000505077 ABCC1P33527 1531 aa15.83■□□□□ 0.12
RFC1-210ENST00000505077 CROCC2H7BZ55 1655 aa15.83■□□□□ 0.12
RFC1-210ENST00000505077 TCOF1Q13428 1488 aaKnown RBP15.82■□□□□ 0.12
RFC1-210ENST00000505077 CAMSAP2Q08AD1 1489 aa15.81■□□□□ 0.12
RFC1-210ENST00000505077 ARHGEF5Q12774 1597 aa15.8■□□□□ 0.12
RFC1-210ENST00000505077 RRBP1Q9P2E9 1410 aaKnown RBP15.8■□□□□ 0.12
RFC1-210ENST00000505077 RICTORQ6R327 1708 aa15.8■□□□□ 0.12
RFC1-210ENST00000505077 DNMT1P26358 1616 aaKnown RBP15.79■□□□□ 0.12
RFC1-210ENST00000505077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.78■□□□□ 0.12
RFC1-210ENST00000505077 CFDP1Q9UEE9 299 aaPredicted RBP15.78■□□□□ 0.12
RFC1-210ENST00000505077 KIAA1107Q9UPP5 1409 aa15.77■□□□□ 0.12
RFC1-210ENST00000505077 ADRA2BP18089 450 aa15.77■□□□□ 0.12
RFC1-210ENST00000505077 EFCAB2Q5VUJ9 269 aa15.77■□□□□ 0.12
RFC1-210ENST00000505077 ADGRL1O94910 1474 aa15.77■□□□□ 0.11
RFC1-210ENST00000505077 ADGBQ8N7X0 1667 aa15.76■□□□□ 0.11
RFC1-210ENST00000505077 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
RFC1-210ENST00000505077 KCNA4P22459 653 aa15.76■□□□□ 0.11
RFC1-210ENST00000505077 PPARGC1BQ86YN6 1023 aaKnown RBP15.76■□□□□ 0.11
RFC1-210ENST00000505077 SYCP2Q9BX26 1530 aa15.76■□□□□ 0.11
RFC1-210ENST00000505077 AKNAQ7Z591 1439 aa15.75■□□□□ 0.11
RFC1-210ENST00000505077 KDM5CP41229 1560 aa15.73■□□□□ 0.11
RFC1-210ENST00000505077 KDM6BO15054 1643 aa15.72■□□□□ 0.11
RFC1-210ENST00000505077 ZMYM4Q5VZL5 1548 aa15.72■□□□□ 0.11
RFC1-210ENST00000505077 ZNF518AQ6AHZ1 1483 aa15.71■□□□□ 0.11
RFC1-210ENST00000505077 CCDC141Q6ZP82 1450 aa15.71■□□□□ 0.11
RFC1-210ENST00000505077 SHANK2Q9UPX8 1470 aa15.71■□□□□ 0.11
RFC1-210ENST00000505077 FRMPD1Q5SYB0 1578 aa15.71■□□□□ 0.11
RFC1-210ENST00000505077 MAST1Q9Y2H9 1570 aa15.71■□□□□ 0.11
RFC1-210ENST00000505077 POGZQ7Z3K3 1410 aa15.7■□□□□ 0.1
RFC1-210ENST00000505077 MBD5Q9P267 1494 aa15.7■□□□□ 0.1
RFC1-210ENST00000505077 HECW2Q9P2P5 1572 aa15.7■□□□□ 0.1
RFC1-210ENST00000505077 INO80Q9ULG1 1556 aaPredicted RBP15.7■□□□□ 0.1
RFC1-210ENST00000505077 DENND4BO75064 1496 aaPredicted RBP15.69■□□□□ 0.1
RFC1-210ENST00000505077 ARHGEF12Q9NZN5 1544 aa15.68■□□□□ 0.1
RFC1-210ENST00000505077 SCAPERQ9BY12 1400 aa15.68■□□□□ 0.1
RFC1-210ENST00000505077 PLXNC1O60486 1568 aa15.67■□□□□ 0.1
RFC1-210ENST00000505077 RSPH4AQ5TD94 716 aa15.67■□□□□ 0.1
RFC1-210ENST00000505077 ZNF777Q9ULD5 760 aaPredicted RBP15.67■□□□□ 0.1
RFC1-210ENST00000505077 ZFYVE16Q7Z3T8 1539 aa15.66■□□□□ 0.1
RFC1-210ENST00000505077 KIDINS220Q9ULH0 1771 aa15.66■□□□□ 0.1
RFC1-210ENST00000505077 DAPK1P53355 1430 aa15.66■□□□□ 0.1
RFC1-210ENST00000505077 ATP7AQ04656 1500 aa15.64■□□□□ 0.09
RFC1-210ENST00000505077 GCC2Q8IWJ2 1684 aa15.64■□□□□ 0.09
RFC1-210ENST00000505077 MAGI2Q86UL8 1455 aa15.64■□□□□ 0.09
RFC1-210ENST00000505077 ZNF644Q9H582 1327 aaPredicted RBP15.64■□□□□ 0.09
RFC1-210ENST00000505077 FAM50AQ14320 339 aaKnown RBP15.63■□□□□ 0.09
RFC1-210ENST00000505077 MLH3Q9UHC1 1453 aa15.63■□□□□ 0.09
RFC1-210ENST00000505077 ABCC5O15440 1437 aa15.62■□□□□ 0.09
RFC1-210ENST00000505077 TRAPPC8Q9Y2L5 1435 aa15.62■□□□□ 0.09
RFC1-210ENST00000505077 ADGRL2O95490 1459 aa15.62■□□□□ 0.09
RFC1-210ENST00000505077 ARHGEF40Q8TER5 1519 aa15.62■□□□□ 0.09
RFC1-210ENST00000505077 RTEL1-TNFRSF6BF6WH68 1400 aa15.61■□□□□ 0.09
RFC1-210ENST00000505077 C9orf84Q5VXU9 1444 aa15.61■□□□□ 0.09
RFC1-210ENST00000505077 ABCA6Q8N139 1617 aa15.6■□□□□ 0.09
RFC1-210ENST00000505077 COL17A1Q9UMD9 1497 aaPredicted RBP15.59■□□□□ 0.09
RFC1-210ENST00000505077 REREQ9P2R6 1566 aa15.58■□□□□ 0.09
RFC1-210ENST00000505077 HNRNPMP52272 730 aaKnown RBP eCLIP15.58■□□□□ 0.08
RFC1-210ENST00000505077 ROCK1Q13464 1354 aa15.58■□□□□ 0.08
RFC1-210ENST00000505077 DIP2CQ9Y2E4 1556 aa15.58■□□□□ 0.08
RFC1-210ENST00000505077 BCORL1Q5H9F3 1711 aa15.57■□□□□ 0.08
RFC1-210ENST00000505077 TRIM26Q12899 539 aaPredicted RBP15.57■□□□□ 0.08
RFC1-210ENST00000505077 EIF2AK4Q9P2K8 1649 aaKnown RBP15.57■□□□□ 0.08
RFC1-210ENST00000505077 TSPY4P0CV99 314 aa15.56■□□□□ 0.08
RFC1-210ENST00000505077 TSPY10P0CW01 314 aa15.56■□□□□ 0.08
RFC1-210ENST00000505077 SPAG9O60271 1321 aaKnown RBP15.55■□□□□ 0.08
RFC1-210ENST00000505077 DUOX2Q9NRD8 1548 aa15.54■□□□□ 0.08
RFC1-210ENST00000505077 ANKRD30AQ9BXX3 1397 aa15.54■□□□□ 0.08
RFC1-210ENST00000505077 PTPRKQ15262 1439 aa15.53■□□□□ 0.08
RFC1-210ENST00000505077 AFAP1Q8N556 730 aa15.53■□□□□ 0.08
RFC1-210ENST00000505077 NCOA1Q15788 1441 aa15.52■□□□□ 0.08
RFC1-210ENST00000505077 RAPGEF3O95398 923 aa15.52■□□□□ 0.08
RFC1-210ENST00000505077 HFM1A2PYH4 1435 aa15.51■□□□□ 0.07
RFC1-210ENST00000505077 ERBINQ96RT1 1412 aa15.5■□□□□ 0.07
RFC1-210ENST00000505077 DEPDC5O75140 1603 aa15.5■□□□□ 0.07
RFC1-210ENST00000505077 PPP6R1Q9UPN7 881 aa15.49■□□□□ 0.07
RFC1-210ENST00000505077 RNF17Q9BXT8 1623 aaKnown RBP15.49■□□□□ 0.07
RFC1-210ENST00000505077 KIF15Q9NS87 1388 aa15.49■□□□□ 0.07
RFC1-210ENST00000505077 ATP10AO60312 1499 aa15.48■□□□□ 0.07
RFC1-210ENST00000505077 YEATS2Q9ULM3 1422 aa15.48■□□□□ 0.07
RFC1-210ENST00000505077 A2MP01023 1474 aa15.47■□□□□ 0.07
RFC1-210ENST00000505077 AGLP35573 1532 aa15.47■□□□□ 0.07
RFC1-210ENST00000505077 UNC13BO14795 1591 aa15.46■□□□□ 0.07
RFC1-210ENST00000505077 ITGAEP38570 1179 aa15.46■□□□□ 0.07
RFC1-210ENST00000505077 SIGLEC1Q9BZZ2 1709 aa15.46■□□□□ 0.06
RFC1-210ENST00000505077 NAIPQ13075 1403 aa15.45■□□□□ 0.06
RFC1-210ENST00000505077 ZC3H13Q5T200 1668 aaKnown RBP15.44■□□□□ 0.06
RFC1-210ENST00000505077 FAM135AQ9P2D6 1515 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms