RNA–Protein interactions for RNA: ENST00000504789.5

SUB1-205, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 4

Gene SUB1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-205ENST00000504789 ARHGAP5Q13017 1502 aa31.52■■■□□ 2.64
SUB1-205ENST00000504789 MAGI2Q86UL8 1455 aa31.51■■■□□ 2.63
SUB1-205ENST00000504789 CEP162Q5TB80 1403 aa31.49■■■□□ 2.63
SUB1-205ENST00000504789 ARID4BQ4LE39 1312 aaPredicted RBP31.48■■■□□ 2.63
SUB1-205ENST00000504789 ZFYVE16Q7Z3T8 1539 aa31.47■■■□□ 2.63
SUB1-205ENST00000504789 ADAMTSL3P82987 1691 aa31.46■■■□□ 2.63
SUB1-205ENST00000504789 YEATS2Q9ULM3 1422 aa31.46■■■□□ 2.63
SUB1-205ENST00000504789 CDC42BPBQ9Y5S2 1711 aa31.44■■■□□ 2.62
SUB1-205ENST00000504789 BCORL1Q5H9F3 1711 aa31.43■■■□□ 2.62
SUB1-205ENST00000504789 PREX2Q70Z35 1606 aa31.42■■■□□ 2.62
SUB1-205ENST00000504789 ZNF518AQ6AHZ1 1483 aa31.4■■■□□ 2.62
SUB1-205ENST00000504789 PTPRMP28827 1452 aa31.36■■■□□ 2.61
SUB1-205ENST00000504789 AFAP1Q8N556 730 aa31.36■■■□□ 2.61
SUB1-205ENST00000504789 CDC42BPAQ5VT25 1732 aa31.35■■■□□ 2.61
SUB1-205ENST00000504789 LOC105371045A0A1W2PR82 267 aa31.35■■■□□ 2.61
SUB1-205ENST00000504789 KDM5CP41229 1560 aa31.34■■■□□ 2.61
SUB1-205ENST00000504789 MADDQ8WXG6 1647 aa31.33■■■□□ 2.61
SUB1-205ENST00000504789 ABCC1P33527 1531 aa31.32■■■□□ 2.6
SUB1-205ENST00000504789 ATP10AO60312 1499 aa31.32■■■□□ 2.6
SUB1-205ENST00000504789 MTUS2Q5JR59 1369 aa31.31■■■□□ 2.6
SUB1-205ENST00000504789 HECW2Q9P2P5 1572 aa31.31■■■□□ 2.6
SUB1-205ENST00000504789 SIGLEC1Q9BZZ2 1709 aa31.31■■■□□ 2.6
SUB1-205ENST00000504789 GPATCH8Q9UKJ3 1502 aaKnown RBP31.3■■■□□ 2.6
SUB1-205ENST00000504789 ARHGEF12Q9NZN5 1544 aa31.29■■■□□ 2.6
SUB1-205ENST00000504789 C9orf84Q5VXU9 1444 aa31.28■■■□□ 2.6
SUB1-205ENST00000504789 TRAPPC8Q9Y2L5 1435 aa31.26■■■□□ 2.6
SUB1-205ENST00000504789 MYT1LQ9UL68 1186 aa31.25■■■□□ 2.59
SUB1-205ENST00000504789 MLH3Q9UHC1 1453 aa31.25■■■□□ 2.59
SUB1-205ENST00000504789 ITSN2Q9NZM3 1697 aa31.25■■■□□ 2.59
SUB1-205ENST00000504789 CCNB3Q8WWL7 1395 aa31.23■■■□□ 2.59
SUB1-205ENST00000504789 ZNF777Q9ULD5 760 aaPredicted RBP31.23■■■□□ 2.59
SUB1-205ENST00000504789 EHBP1L1Q8N3D4 1523 aa31.22■■■□□ 2.59
SUB1-205ENST00000504789 MLECQ14165 292 aa31.21■■■□□ 2.59
SUB1-205ENST00000504789 RIMS1Q86UR5 1692 aaKnown RBP31.21■■■□□ 2.59
SUB1-205ENST00000504789 SAMD9LQ8IVG5 1584 aa31.21■■■□□ 2.59
SUB1-205ENST00000504789 CFDP1Q9UEE9 299 aaPredicted RBP31.2■■■□□ 2.59
SUB1-205ENST00000504789 DIP2CQ9Y2E4 1556 aa31.18■■■□□ 2.58
SUB1-205ENST00000504789 VPS8Q8N3P4 1428 aa31.15■■■□□ 2.58
SUB1-205ENST00000504789 REREQ9P2R6 1566 aa31.15■■■□□ 2.58
SUB1-205ENST00000504789 ABCA6Q8N139 1617 aa31.15■■■□□ 2.58
SUB1-205ENST00000504789 SYCP2Q9BX26 1530 aa31.14■■■□□ 2.58
SUB1-205ENST00000504789 KIAA1107Q9UPP5 1409 aa31.14■■■□□ 2.58
SUB1-205ENST00000504789 PLEKHH2Q8IVE3 1493 aa31.14■■■□□ 2.57
SUB1-205ENST00000504789 HNRNPMP52272 730 aaKnown RBP eCLIP31.13■■■□□ 2.571e-10■■■■■ 32.4
SUB1-205ENST00000504789 TIAM1Q13009 1591 aa31.12■■■□□ 2.57
SUB1-205ENST00000504789 FER1L4A9Z1Z3 1794 aa31.11■■■□□ 2.57
SUB1-205ENST00000504789 KIDINS220Q9ULH0 1771 aa31.1■■■□□ 2.57
SUB1-205ENST00000504789 SPAG9O60271 1321 aaKnown RBP31.06■■■□□ 2.56
SUB1-205ENST00000504789 AGLP35573 1532 aa31.05■■■□□ 2.56
SUB1-205ENST00000504789 PLPPR3Q6T4P5 718 aa31.05■■■□□ 2.56
SUB1-205ENST00000504789 SUPT6HQ7KZ85 1726 aaKnown RBP31.04■■■□□ 2.56
SUB1-205ENST00000504789 NCOA2Q15596 1464 aa31.03■■■□□ 2.56
SUB1-205ENST00000504789 ZNF644Q9H582 1327 aaPredicted RBP31.02■■■□□ 2.56
SUB1-205ENST00000504789 LMTK3Q96Q04 1460 aa31.01■■■□□ 2.55
SUB1-205ENST00000504789 LRRC9Q6ZRR7 1453 aa30.98■■■□□ 2.55
SUB1-205ENST00000504789 ATP7AQ04656 1500 aa30.98■■■□□ 2.55
SUB1-205ENST00000504789 MBD5Q9P267 1494 aa30.96■■■□□ 2.55
SUB1-205ENST00000504789 MAP3K1Q13233 1512 aa30.96■■■□□ 2.55
SUB1-205ENST00000504789 INO80Q9ULG1 1556 aaPredicted RBP30.96■■■□□ 2.55
SUB1-205ENST00000504789 CEBPAP49715 358 aaPredicted RBP30.92■■■□□ 2.54
SUB1-205ENST00000504789 ESF1Q9H501 851 aaKnown RBP30.89■■■□□ 2.54
SUB1-205ENST00000504789 A2MP01023 1474 aa30.89■■■□□ 2.53
SUB1-205ENST00000504789 KANK4Q5T7N3 995 aaPredicted RBP30.88■■■□□ 2.53
SUB1-205ENST00000504789 CAMSAP2Q08AD1 1489 aa30.87■■■□□ 2.53
SUB1-205ENST00000504789 RTEL1-TNFRSF6BF6WH68 1400 aa30.86■■■□□ 2.53
SUB1-205ENST00000504789 PLXNC1O60486 1568 aa30.86■■■□□ 2.53
SUB1-205ENST00000504789 RSPH4AQ5TD94 716 aa30.85■■■□□ 2.53
SUB1-205ENST00000504789 HSPA2P54652 639 aa30.84■■■□□ 2.53
SUB1-205ENST00000504789 CCDC141Q6ZP82 1450 aa30.83■■■□□ 2.53
SUB1-205ENST00000504789 CNTLNQ9NXG0 1405 aa30.83■■■□□ 2.53
SUB1-205ENST00000504789 ADGBQ8N7X0 1667 aa30.81■■■□□ 2.52
SUB1-205ENST00000504789 C3P01024 1663 aa30.8■■■□□ 2.52
SUB1-205ENST00000504789 PREX1Q8TCU6 1659 aa30.8■■■□□ 2.52
SUB1-205ENST00000504789 APLP2Q06481 763 aa30.78■■■□□ 2.52
SUB1-205ENST00000504789 ARHGEF5Q12774 1597 aa30.76■■■□□ 2.52
SUB1-205ENST00000504789 DHX29Q7Z478 1369 aaKnown RBP30.74■■■□□ 2.51
SUB1-205ENST00000504789 SETD1BQ9UPS6 1966 aaKnown RBP30.74■■■□□ 2.51
SUB1-205ENST00000504789 MYOM3Q5VTT5 1437 aa30.73■■■□□ 2.51
SUB1-205ENST00000504789 MIA2Q96PC5 1412 aa30.73■■■□□ 2.51
SUB1-205ENST00000504789 GGT6Q6P531 493 aa30.73■■■□□ 2.51
SUB1-205ENST00000504789 UHRF1BP1Q6BDS2 1440 aa30.73■■■□□ 2.51
SUB1-205ENST00000504789 TSPY4P0CV99 314 aa30.72■■■□□ 2.51
SUB1-205ENST00000504789 TSPY10P0CW01 314 aa30.72■■■□□ 2.51
SUB1-205ENST00000504789 MROH2AA6NES4 1674 aa30.71■■■□□ 2.51
SUB1-205ENST00000504789 ZMYM3Q14202 1370 aa30.7■■■□□ 2.51
SUB1-205ENST00000504789 PPP6R1Q9UPN7 881 aa30.69■■■□□ 2.5
SUB1-205ENST00000504789 ILDR1Q86SU0 546 aaPredicted RBP30.67■■■□□ 2.5
SUB1-205ENST00000504789 CLTCQ00610 1675 aaKnown RBP30.65■■■□□ 2.5
SUB1-205ENST00000504789 NPATQ14207 1427 aa30.64■■■□□ 2.5
SUB1-205ENST00000504789 KIF3BO15066 747 aa30.62■■■□□ 2.49
SUB1-205ENST00000504789 MAST1Q9Y2H9 1570 aa30.61■■■□□ 2.49
SUB1-205ENST00000504789 PTPRKQ15262 1439 aa30.54■■■□□ 2.48
SUB1-205ENST00000504789 PTPN23Q9H3S7 1636 aa30.52■■■□□ 2.48
SUB1-205ENST00000504789 STRCQ7RTU9 1775 aa30.52■■■□□ 2.48
SUB1-205ENST00000504789 DMRT2Q9Y5R5 561 aa30.51■■■□□ 2.47
SUB1-205ENST00000504789 FAM135AQ9P2D6 1515 aa30.51■■■□□ 2.47
SUB1-205ENST00000504789 FGD6Q6ZV73 1430 aa30.49■■■□□ 2.47
SUB1-205ENST00000504789 KDM5DQ9BY66 1539 aa30.48■■■□□ 2.47
SUB1-205ENST00000504789 WASHC2CQ9Y4E1 1318 aa30.47■■■□□ 2.47
SUB1-205ENST00000504789 ABCC5O15440 1437 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms