RNA–Protein interactions for RNA: ENST00000504571.5

ATP2C1-206, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2C1, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-206ENST00000504571 ILDR1Q86SU0 546 aaPredicted RBP7.82□□□□□ -1.16
ATP2C1-206ENST00000504571 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.82□□□□□ -1.16
ATP2C1-206ENST00000504571 PRKCSHP14314 528 aaPredicted RBP7.8□□□□□ -1.16
ATP2C1-206ENST00000504571 L3MBTL3Q96JM7 780 aaPredicted RBP7.8□□□□□ -1.16
ATP2C1-206ENST00000504571 ST18O60284 1047 aa7.79□□□□□ -1.16
ATP2C1-206ENST00000504571 PPP1R37O75864 691 aa7.78□□□□□ -1.16
ATP2C1-206ENST00000504571 C3orf67Q6ZVT6 689 aa7.78□□□□□ -1.16
ATP2C1-206ENST00000504571 MS4A4AQ96JQ5 239 aa7.77□□□□□ -1.17
ATP2C1-206ENST00000504571 CADPS2Q86UW7 1296 aa7.74□□□□□ -1.17
ATP2C1-206ENST00000504571 BOLA1Q9Y3E2 137 aa7.74□□□□□ -1.17
ATP2C1-206ENST00000504571 WDR70Q9NW82 654 aa7.73□□□□□ -1.17
ATP2C1-206ENST00000504571 G3V3G9 751 aa7.71□□□□□ -1.18
ATP2C1-206ENST00000504571 SNPHO15079 494 aa7.7□□□□□ -1.18
ATP2C1-206ENST00000504571 P3H3Q8IVL6 736 aa7.7□□□□□ -1.18
ATP2C1-206ENST00000504571 MARVELD3Q96A59 401 aa7.7□□□□□ -1.18
ATP2C1-206ENST00000504571 PCDH10Q9P2E7 1040 aa7.7□□□□□ -1.18
ATP2C1-206ENST00000504571 CDAN1Q8IWY9 1227 aa7.69□□□□□ -1.18
ATP2C1-206ENST00000504571 NBR1Q14596 966 aa7.68□□□□□ -1.18
ATP2C1-206ENST00000504571 TMEM121BQ9BXQ6 578 aaPredicted RBP7.68□□□□□ -1.18
ATP2C1-206ENST00000504571 PDE4AP27815 886 aa7.67□□□□□ -1.18
ATP2C1-206ENST00000504571 MICALL2Q8IY33 904 aa7.66□□□□□ -1.18
ATP2C1-206ENST00000504571 TPRNQ4KMQ1 711 aa7.65□□□□□ -1.18
ATP2C1-206ENST00000504571 CRISPLD2Q9H0B8 497 aa7.65□□□□□ -1.18
ATP2C1-206ENST00000504571 NCKAP5LQ9HCH0 1330 aa7.65□□□□□ -1.18
ATP2C1-206ENST00000504571 TMEM92Q6UXU6 159 aa7.64□□□□□ -1.19
ATP2C1-206ENST00000504571 HOXB3P14651 431 aaPredicted RBP7.63□□□□□ -1.19
ATP2C1-206ENST00000504571 MFSD10Q14728 455 aa7.63□□□□□ -1.19
ATP2C1-206ENST00000504571 LARP6Q9BRS8 491 aaKnown RBP7.63□□□□□ -1.19
ATP2C1-206ENST00000504571 E2F4Q16254 413 aa7.62□□□□□ -1.19
ATP2C1-206ENST00000504571 KCNV2Q8TDN2 545 aa7.61□□□□□ -1.19
ATP2C1-206ENST00000504571 DDX27Q96GQ7 796 aaKnown RBP7.61□□□□□ -1.19
ATP2C1-206ENST00000504571 POTEB3A0JP26 581 aa7.6□□□□□ -1.19
ATP2C1-206ENST00000504571 EMP3P54852 163 aa7.6□□□□□ -1.19
ATP2C1-206ENST00000504571 POTEBQ6S5H4 581 aa7.6□□□□□ -1.19
ATP2C1-206ENST00000504571 GPHNQ9NQX3 736 aaPredicted RBP7.6□□□□□ -1.19
ATP2C1-206ENST00000504571 ARHGEF1Q92888 912 aaKnown RBP7.59□□□□□ -1.19
ATP2C1-206ENST00000504571 FAM205CA6NFA0 338 aa7.58□□□□□ -1.2
ATP2C1-206ENST00000504571 ZNF710Q8N1W2 664 aa7.57□□□□□ -1.2
ATP2C1-206ENST00000504571 TMC2Q8TDI7 906 aa7.57□□□□□ -1.2
ATP2C1-206ENST00000504571 PPP1R15BQ5SWA1 713 aa7.56□□□□□ -1.2
ATP2C1-206ENST00000504571 HS3ST6Q96QI5 342 aa7.56□□□□□ -1.2
ATP2C1-206ENST00000504571 CAMK2BQ13554 666 aa7.55□□□□□ -1.2
ATP2C1-206ENST00000504571 DOK7Q18PE1 504 aa7.55□□□□□ -1.2
ATP2C1-206ENST00000504571 HOXB1P14653 301 aaPredicted RBP7.54□□□□□ -1.2
ATP2C1-206ENST00000504571 ARIH1Q9Y4X5 557 aaPredicted RBP7.54□□□□□ -1.2
ATP2C1-206ENST00000504571 FOXK1P85037 733 aa7.53□□□□□ -1.2
ATP2C1-206ENST00000504571 KIF3CO14782 793 aa7.52□□□□□ -1.21
ATP2C1-206ENST00000504571 DSG2Q14126 1118 aa7.52□□□□□ -1.21
ATP2C1-206ENST00000504571 C2orf72A6NCS6 295 aa7.51□□□□□ -1.21
ATP2C1-206ENST00000504571 SPNS2Q8IVW8 549 aa7.5□□□□□ -1.21
ATP2C1-206ENST00000504571 ERBB3P21860 1342 aa7.5□□□□□ -1.21
ATP2C1-206ENST00000504571 TULP1O00294 542 aaPredicted RBP7.49□□□□□ -1.21
ATP2C1-206ENST00000504571 RIMBP2O15034 1052 aa7.49□□□□□ -1.21
ATP2C1-206ENST00000504571 GPR153Q6NV75 609 aa7.49□□□□□ -1.21
ATP2C1-206ENST00000504571 PLPP6Q8IY26 295 aa7.49□□□□□ -1.21
ATP2C1-206ENST00000504571 KHSRPQ92945 711 aaKnown RBP eCLIP7.49□□□□□ -1.219e-7■■■■□ 19.8
ATP2C1-206ENST00000504571 KRTAP3-3Q9BYR6 98 aa7.49□□□□□ -1.21
ATP2C1-206ENST00000504571 KRTAP3-2Q9BYR7 98 aa7.49□□□□□ -1.21
ATP2C1-206ENST00000504571 ARSIQ5FYB1 569 aa7.48□□□□□ -1.21
ATP2C1-206ENST00000504571 TESPA1A2RU30 521 aaPredicted RBP7.46□□□□□ -1.22
ATP2C1-206ENST00000504571 MMRN1Q13201 1228 aa7.46□□□□□ -1.22
ATP2C1-206ENST00000504571 VARS2Q5ST30 1063 aaKnown RBP7.46□□□□□ -1.22
ATP2C1-206ENST00000504571 SPDYE16A6NNV3 312 aaPredicted RBP7.45□□□□□ -1.22
ATP2C1-206ENST00000504571 ZSWIM6Q9HCJ5 1215 aa7.45□□□□□ -1.22
ATP2C1-206ENST00000504571 EMILIN3Q9NT22 766 aa7.45□□□□□ -1.22
ATP2C1-206ENST00000504571 SEMA3EO15041 775 aa7.44□□□□□ -1.22
ATP2C1-206ENST00000504571 SMYD5Q6GMV2 418 aa7.44□□□□□ -1.22
ATP2C1-206ENST00000504571 DPYSL4O14531 572 aa7.43□□□□□ -1.22
ATP2C1-206ENST00000504571 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.43□□□□□ -1.22
ATP2C1-206ENST00000504571 PDIA6Q15084 440 aa7.42□□□□□ -1.22
ATP2C1-206ENST00000504571 LMOD2Q6P5Q4 547 aa7.42□□□□□ -1.22
ATP2C1-206ENST00000504571 MAP3K9P80192 1104 aa7.41□□□□□ -1.22
ATP2C1-206ENST00000504571 OXER1Q8TDS5 423 aa7.4□□□□□ -1.22
ATP2C1-206ENST00000504571 NUDT7P0C024 238 aa7.39□□□□□ -1.23
ATP2C1-206ENST00000504571 TBC1D12O60347 775 aa7.38□□□□□ -1.23
ATP2C1-206ENST00000504571 SLC34A2O95436 690 aa7.38□□□□□ -1.23
ATP2C1-206ENST00000504571 ZNF687Q8N1G0 1237 aa7.38□□□□□ -1.23
ATP2C1-206ENST00000504571 UPF1Q92900 1129 aaKnown RBP eCLIP7.38□□□□□ -1.23
ATP2C1-206ENST00000504571 PCDHGA4Q9Y5G9 962 aa7.38□□□□□ -1.23
ATP2C1-206ENST00000504571 ZNF316A6NFI3 1004 aaPredicted RBP7.37□□□□□ -1.23
ATP2C1-206ENST00000504571 PTCD2Q8WV60 388 aaKnown RBP7.37□□□□□ -1.23
ATP2C1-206ENST00000504571 MLLT3P42568 568 aaPredicted RBP7.35□□□□□ -1.23
ATP2C1-206ENST00000504571 LHX6Q9UPM6 363 aa7.35□□□□□ -1.23
ATP2C1-206ENST00000504571 EVI5O60447 810 aa7.33□□□□□ -1.24
ATP2C1-206ENST00000504571 PTGER2P43116 358 aa7.33□□□□□ -1.24
ATP2C1-206ENST00000504571 ANKRD13DQ6ZTN6 518 aa7.31□□□□□ -1.24
ATP2C1-206ENST00000504571 ZC3H15Q8WU90 426 aaKnown RBP7.31□□□□□ -1.24
ATP2C1-206ENST00000504571 AXIN2Q9Y2T1 843 aa7.31□□□□□ -1.24
ATP2C1-206ENST00000504571 POTEEQ6S8J3 1075 aa7.3□□□□□ -1.24
ATP2C1-206ENST00000504571 ANO8Q9HCE9 1232 aaPredicted RBP7.3□□□□□ -1.24
ATP2C1-206ENST00000504571 KDM4FA0A1W2PPD8 638 aa7.29□□□□□ -1.24
ATP2C1-206ENST00000504571 GRXCR2A6NFK2 248 aa7.29□□□□□ -1.24
ATP2C1-206ENST00000504571 RBM26Q5T8P6 1007 aaKnown RBP7.29□□□□□ -1.24
ATP2C1-206ENST00000504571 GPIHBP1Q8IV16 184 aa7.29□□□□□ -1.24
ATP2C1-206ENST00000504571 DDX12PQ92771 950 aa7.27□□□□□ -1.25
ATP2C1-206ENST00000504571 ZMYND10O75800 440 aa7.26□□□□□ -1.25
ATP2C1-206ENST00000504571 OSBPP22059 807 aa7.26□□□□□ -1.25
ATP2C1-206ENST00000504571 LSM11P83369 360 aaKnown RBP eCLIP7.26□□□□□ -1.25
ATP2C1-206ENST00000504571 MYT1LQ9UL68 1186 aa7.26□□□□□ -1.25
ATP2C1-206ENST00000504571 RNF166Q96A37 237 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms