RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 NACADO15069 1562 aa14.62□□□□□ -0.07
UBE2B-204ENST00000504431 P3H3Q8IVL6 736 aa14.62□□□□□ -0.07
UBE2B-204ENST00000504431 MICALL2Q8IY33 904 aa14.62□□□□□ -0.07
UBE2B-204ENST00000504431 TMEM121BQ9BXQ6 578 aaPredicted RBP14.57□□□□□ -0.08
UBE2B-204ENST00000504431 COLQQ9Y215 455 aaPredicted RBP14.57□□□□□ -0.08
UBE2B-204ENST00000504431 CRISPLD2Q9H0B8 497 aa14.56□□□□□ -0.08
UBE2B-204ENST00000504431 LARP6Q9BRS8 491 aaKnown RBP14.54□□□□□ -0.08
UBE2B-204ENST00000504431 NCKAP5LQ9HCH0 1330 aa14.54□□□□□ -0.08
UBE2B-204ENST00000504431 DDX27Q96GQ7 796 aaKnown RBP14.53□□□□□ -0.08
UBE2B-204ENST00000504431 MFSD10Q14728 455 aa14.52□□□□□ -0.09
UBE2B-204ENST00000504431 TMC2Q8TDI7 906 aa14.52□□□□□ -0.09
UBE2B-204ENST00000504431 NBR1Q14596 966 aa14.5□□□□□ -0.09
UBE2B-204ENST00000504431 GPHNQ9NQX3 736 aaPredicted RBP14.5□□□□□ -0.09
UBE2B-204ENST00000504431 POTEFA5A3E0 1075 aa14.49□□□□□ -0.09
UBE2B-204ENST00000504431 E2F4Q16254 413 aa14.47□□□□□ -0.09
UBE2B-204ENST00000504431 C3orf67Q6ZVT6 689 aa14.47□□□□□ -0.09
UBE2B-204ENST00000504431 MYO15BQ96JP2 1530 aa14.46□□□□□ -0.09
UBE2B-204ENST00000504431 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.1
UBE2B-204ENST00000504431 PPP1R15BQ5SWA1 713 aa14.43□□□□□ -0.1
UBE2B-204ENST00000504431 KCNV2Q8TDN2 545 aa14.42□□□□□ -0.1
UBE2B-204ENST00000504431 UNC13AQ9UPW8 1703 aa14.41□□□□□ -0.1
UBE2B-204ENST00000504431 FOXK1P85037 733 aa14.39□□□□□ -0.11
UBE2B-204ENST00000504431 ARHGEF1Q92888 912 aaKnown RBP14.39□□□□□ -0.11
UBE2B-204ENST00000504431 C2orf72A6NCS6 295 aa14.37□□□□□ -0.11
UBE2B-204ENST00000504431 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.37□□□□□ -0.11
UBE2B-204ENST00000504431 KIF3CO14782 793 aa14.36□□□□□ -0.11
UBE2B-204ENST00000504431 CAMK2BQ13554 666 aa14.36□□□□□ -0.11
UBE2B-204ENST00000504431 SCRIBQ14160 1630 aa14.35□□□□□ -0.11
UBE2B-204ENST00000504431 DSG2Q14126 1118 aa14.35□□□□□ -0.11
UBE2B-204ENST00000504431 PLPP6Q8IY26 295 aa14.31□□□□□ -0.12
UBE2B-204ENST00000504431 ARIH1Q9Y4X5 557 aaPredicted RBP14.31□□□□□ -0.12
UBE2B-204ENST00000504431 TMEM92Q6UXU6 159 aa14.29□□□□□ -0.12
UBE2B-204ENST00000504431 MAMSTRQ6ZN01 415 aa14.29□□□□□ -0.12
UBE2B-204ENST00000504431 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
UBE2B-204ENST00000504431 SCUBE2Q9NQ36 999 aa14.26□□□□□ -0.13
UBE2B-204ENST00000504431 TULP1O00294 542 aaPredicted RBP14.24□□□□□ -0.13
UBE2B-204ENST00000504431 EMILIN3Q9NT22 766 aa14.19□□□□□ -0.14
UBE2B-204ENST00000504431 SPDYE16A6NNV3 312 aaPredicted RBP14.18□□□□□ -0.14
UBE2B-204ENST00000504431 DPYSL4O14531 572 aa14.16□□□□□ -0.14
UBE2B-204ENST00000504431 MAP3K9P80192 1104 aa14.16□□□□□ -0.14
UBE2B-204ENST00000504431 SHROOM4Q9ULL8 1493 aa14.16□□□□□ -0.14
UBE2B-204ENST00000504431 POTEB2H3BUK9 544 aa14.15□□□□□ -0.14
UBE2B-204ENST00000504431 TBC1D12O60347 775 aa14.15□□□□□ -0.14
UBE2B-204ENST00000504431 POTEJP0CG39 1038 aa14.14□□□□□ -0.15
UBE2B-204ENST00000504431 SMYD5Q6GMV2 418 aa14.14□□□□□ -0.15
UBE2B-204ENST00000504431 ZNF316A6NFI3 1004 aaPredicted RBP14.13□□□□□ -0.15
UBE2B-204ENST00000504431 SLC34A2O95436 690 aa14.13□□□□□ -0.15
UBE2B-204ENST00000504431 PDIA6Q15084 440 aa14.13□□□□□ -0.15
UBE2B-204ENST00000504431 SLAIN1Q8ND83 568 aa14.13□□□□□ -0.15
UBE2B-204ENST00000504431 OXER1Q8TDS5 423 aa14.12□□□□□ -0.15
UBE2B-204ENST00000504431 UPF1Q92900 1129 aaKnown RBP eCLIP14.11□□□□□ -0.15
UBE2B-204ENST00000504431 TESPA1A2RU30 521 aaPredicted RBP14.1□□□□□ -0.15
UBE2B-204ENST00000504431 SEMA3EO15041 775 aa14.1□□□□□ -0.15
UBE2B-204ENST00000504431 PTCD2Q8WV60 388 aaKnown RBP14.09□□□□□ -0.15
UBE2B-204ENST00000504431 DOK7Q18PE1 504 aa14.07□□□□□ -0.16
UBE2B-204ENST00000504431 RIMBP2O15034 1052 aa14.06□□□□□ -0.16
UBE2B-204ENST00000504431 SNPHO15079 494 aa14.02□□□□□ -0.17
UBE2B-204ENST00000504431 LMOD2Q6P5Q4 547 aa14.01□□□□□ -0.17
UBE2B-204ENST00000504431 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.01□□□□□ -0.17
UBE2B-204ENST00000504431 EVI5O60447 810 aa14□□□□□ -0.17
UBE2B-204ENST00000504431 LHX8Q68G74 356 aa14□□□□□ -0.17
UBE2B-204ENST00000504431 TPRNQ4KMQ1 711 aa13.99□□□□□ -0.17
UBE2B-204ENST00000504431 ZSWIM6Q9HCJ5 1215 aa13.99□□□□□ -0.17
UBE2B-204ENST00000504431 PCDHGA4Q9Y5G9 962 aa13.99□□□□□ -0.17
UBE2B-204ENST00000504431 ZNF710Q8N1W2 664 aa13.97□□□□□ -0.17
UBE2B-204ENST00000504431 PTGER2P43116 358 aa13.96□□□□□ -0.17
UBE2B-204ENST00000504431 MLLT3P42568 568 aaPredicted RBP13.94□□□□□ -0.18
UBE2B-204ENST00000504431 HOXB3P14651 431 aaPredicted RBP13.93□□□□□ -0.18
UBE2B-204ENST00000504431 OTUD5Q96G74 571 aa13.92□□□□□ -0.18
UBE2B-204ENST00000504431 ANO8Q9HCE9 1232 aaPredicted RBP13.92□□□□□ -0.18
UBE2B-204ENST00000504431 GRXCR2A6NFK2 248 aa13.9□□□□□ -0.18
UBE2B-204ENST00000504431 DDX12PQ92771 950 aa13.87□□□□□ -0.19
UBE2B-204ENST00000504431 EIF4G1Q04637 1599 aaKnown RBP13.87□□□□□ -0.19
UBE2B-204ENST00000504431 PHF14O94880 888 aa13.85□□□□□ -0.19
UBE2B-204ENST00000504431 GPIHBP1Q8IV16 184 aa13.85□□□□□ -0.19
UBE2B-204ENST00000504431 EPAS1Q99814 870 aa13.85□□□□□ -0.19
UBE2B-204ENST00000504431 PRKCSHP14314 528 aaPredicted RBP13.84□□□□□ -0.19
UBE2B-204ENST00000504431 ARSIQ5FYB1 569 aa13.84□□□□□ -0.19
UBE2B-204ENST00000504431 GPR153Q6NV75 609 aa13.83□□□□□ -0.2
UBE2B-204ENST00000504431 CC2D2AQ9P2K1 1620 aa13.82□□□□□ -0.2
UBE2B-204ENST00000504431 NUDT7P0C024 238 aa13.82□□□□□ -0.2
UBE2B-204ENST00000504431 RBM26Q5T8P6 1007 aaKnown RBP13.82□□□□□ -0.2
UBE2B-204ENST00000504431 JPH4Q96JJ6 628 aa13.82□□□□□ -0.2
UBE2B-204ENST00000504431 KDM4FA0A1W2PPD8 638 aa13.81□□□□□ -0.2
UBE2B-204ENST00000504431 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
UBE2B-204ENST00000504431 OSBPP22059 807 aa13.8□□□□□ -0.2
UBE2B-204ENST00000504431 PSDA5PKW4 1024 aaPredicted RBP13.79□□□□□ -0.2
UBE2B-204ENST00000504431 TYW1BQ6NUM6 668 aa13.79□□□□□ -0.2
UBE2B-204ENST00000504431 ZC3H15Q8WU90 426 aaKnown RBP13.79□□□□□ -0.2
UBE2B-204ENST00000504431 FBXW7Q969H0 707 aa13.79□□□□□ -0.2
UBE2B-204ENST00000504431 HOXB1P14653 301 aaPredicted RBP13.78□□□□□ -0.2
UBE2B-204ENST00000504431 KHSRPQ92945 711 aaKnown RBP eCLIP13.76□□□□□ -0.21
UBE2B-204ENST00000504431 NUTM2FA1L443 756 aa13.75□□□□□ -0.21
UBE2B-204ENST00000504431 FOSBP53539 338 aa13.75□□□□□ -0.21
UBE2B-204ENST00000504431 EN1Q05925 392 aaPredicted RBP13.75□□□□□ -0.21
UBE2B-204ENST00000504431 PCDHGA10Q9Y5H3 936 aa13.75□□□□□ -0.21
UBE2B-204ENST00000504431 ZNF454Q8N9F8 522 aa13.74□□□□□ -0.21
UBE2B-204ENST00000504431 MAP3K7O43318 606 aa13.72□□□□□ -0.21
UBE2B-204ENST00000504431 PPP4R3BQ5MIZ7 849 aa13.71□□□□□ -0.21
UBE2B-204ENST00000504431 ZDHHC16Q969W1 377 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms