RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ARHGAP5Q13017 1502 aa20.59■□□□□ 0.89
PDLIM7-212ENST00000504380 PREX2Q70Z35 1606 aa20.59■□□□□ 0.89
PDLIM7-212ENST00000504380 TEX14Q8IWB6 1497 aa20.58■□□□□ 0.89
PDLIM7-212ENST00000504380 ZNF777Q9ULD5 760 aaPredicted RBP20.58■□□□□ 0.89
PDLIM7-212ENST00000504380 FANCAO15360 1455 aa20.57■□□□□ 0.88
PDLIM7-212ENST00000504380 EFCAB2Q5VUJ9 269 aa20.57■□□□□ 0.88
PDLIM7-212ENST00000504380 PHLDB1Q86UU1 1377 aa20.57■□□□□ 0.88
PDLIM7-212ENST00000504380 CFDP1Q9UEE9 299 aaPredicted RBP20.56■□□□□ 0.88
PDLIM7-212ENST00000504380 ZNF644Q9H582 1327 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-212ENST00000504380 AKNAQ7Z591 1439 aa20.53■□□□□ 0.88
PDLIM7-212ENST00000504380 ARAP3Q8WWN8 1544 aa20.53■□□□□ 0.88
PDLIM7-212ENST00000504380 ITSN2Q9NZM3 1697 aa20.52■□□□□ 0.88
PDLIM7-212ENST00000504380 NEO1Q92859 1461 aa20.51■□□□□ 0.87
PDLIM7-212ENST00000504380 COL17A1Q9UMD9 1497 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-212ENST00000504380 MYOM3Q5VTT5 1437 aa20.51■□□□□ 0.87
PDLIM7-212ENST00000504380 CFAP74Q9C0B2 1584 aa20.5■□□□□ 0.87
PDLIM7-212ENST00000504380 SAMD9LQ8IVG5 1584 aa20.49■□□□□ 0.87
PDLIM7-212ENST00000504380 ADGRL1O94910 1474 aa20.48■□□□□ 0.87
PDLIM7-212ENST00000504380 SCAPERQ9BY12 1400 aa20.47■□□□□ 0.87
PDLIM7-212ENST00000504380 RAPGEF3O95398 923 aa20.47■□□□□ 0.87
PDLIM7-212ENST00000504380 HNRNPMP52272 730 aaKnown RBP eCLIP20.47■□□□□ 0.87
PDLIM7-212ENST00000504380 ARHGEF12Q9NZN5 1544 aa20.46■□□□□ 0.87
PDLIM7-212ENST00000504380 FGD6Q6ZV73 1430 aa20.44■□□□□ 0.86
PDLIM7-212ENST00000504380 CAMSAP2Q08AD1 1489 aa20.43■□□□□ 0.86
PDLIM7-212ENST00000504380 ABCC1P33527 1531 aa20.43■□□□□ 0.86
PDLIM7-212ENST00000504380 MIA2Q96PC5 1412 aa20.43■□□□□ 0.86
PDLIM7-212ENST00000504380 DENND4BO75064 1496 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-212ENST00000504380 SYCP2Q9BX26 1530 aa20.43■□□□□ 0.86
PDLIM7-212ENST00000504380 PTPN23Q9H3S7 1636 aa20.42■□□□□ 0.86
PDLIM7-212ENST00000504380 AFAP1Q8N556 730 aa20.41■□□□□ 0.86
PDLIM7-212ENST00000504380 TRAPPC8Q9Y2L5 1435 aa20.41■□□□□ 0.86
PDLIM7-212ENST00000504380 FAM50AQ14320 339 aaKnown RBP20.4■□□□□ 0.86
PDLIM7-212ENST00000504380 FRMPD1Q5SYB0 1578 aa20.39■□□□□ 0.85
PDLIM7-212ENST00000504380 RICTORQ6R327 1708 aa20.38■□□□□ 0.85
PDLIM7-212ENST00000504380 PLEKHH2Q8IVE3 1493 aa20.37■□□□□ 0.85
PDLIM7-212ENST00000504380 POGZQ7Z3K3 1410 aa20.37■□□□□ 0.85
PDLIM7-212ENST00000504380 MBD5Q9P267 1494 aa20.37■□□□□ 0.85
PDLIM7-212ENST00000504380 KIAA1107Q9UPP5 1409 aa20.36■□□□□ 0.85
PDLIM7-212ENST00000504380 HECW2Q9P2P5 1572 aa20.36■□□□□ 0.85
PDLIM7-212ENST00000504380 TCOF1Q13428 1488 aaKnown RBP20.35■□□□□ 0.85
PDLIM7-212ENST00000504380 MYT1LQ9UL68 1186 aa20.33■□□□□ 0.85
PDLIM7-212ENST00000504380 ZNF518AQ6AHZ1 1483 aa20.31■□□□□ 0.84
PDLIM7-212ENST00000504380 RRBP1Q9P2E9 1410 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-212ENST00000504380 ITGAEP38570 1179 aa20.29■□□□□ 0.84
PDLIM7-212ENST00000504380 CCDC141Q6ZP82 1450 aa20.29■□□□□ 0.84
PDLIM7-212ENST00000504380 ARHGEF5Q12774 1597 aa20.29■□□□□ 0.84
PDLIM7-212ENST00000504380 SPAG9O60271 1321 aaKnown RBP20.28■□□□□ 0.84
PDLIM7-212ENST00000504380 ABCC5O15440 1437 aa20.28■□□□□ 0.84
PDLIM7-212ENST00000504380 FBXO41Q8TF61 875 aa20.28■□□□□ 0.84
PDLIM7-212ENST00000504380 KDM5CP41229 1560 aa20.28■□□□□ 0.84
PDLIM7-212ENST00000504380 YEATS2Q9ULM3 1422 aa20.27■□□□□ 0.84
PDLIM7-212ENST00000504380 ZMYM4Q5VZL5 1548 aa20.27■□□□□ 0.83
PDLIM7-212ENST00000504380 DAPK1P53355 1430 aa20.26■□□□□ 0.83
PDLIM7-212ENST00000504380 DNMT1P26358 1616 aaKnown RBP20.25■□□□□ 0.83
PDLIM7-212ENST00000504380 RSPH4AQ5TD94 716 aa20.25■□□□□ 0.83
PDLIM7-212ENST00000504380 CHIC2Q9UKJ5 165 aa20.25■□□□□ 0.83
PDLIM7-212ENST00000504380 TSPY4P0CV99 314 aa20.24■□□□□ 0.83
PDLIM7-212ENST00000504380 TSPY10P0CW01 314 aa20.24■□□□□ 0.83
PDLIM7-212ENST00000504380 KIDINS220Q9ULH0 1771 aa20.23■□□□□ 0.83
PDLIM7-212ENST00000504380 ZFYVE16Q7Z3T8 1539 aa20.23■□□□□ 0.83
PDLIM7-212ENST00000504380 MLH3Q9UHC1 1453 aa20.23■□□□□ 0.83
PDLIM7-212ENST00000504380 PTPRKQ15262 1439 aa20.22■□□□□ 0.83
PDLIM7-212ENST00000504380 CROCC2H7BZ55 1655 aa20.21■□□□□ 0.83
PDLIM7-212ENST00000504380 ATP7AQ04656 1500 aa20.21■□□□□ 0.83
PDLIM7-212ENST00000504380 INO80Q9ULG1 1556 aaPredicted RBP20.21■□□□□ 0.83
PDLIM7-212ENST00000504380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.21■□□□□ 0.836e-6■□□□□ 11
PDLIM7-212ENST00000504380 C9orf84Q5VXU9 1444 aa20.2■□□□□ 0.82
PDLIM7-212ENST00000504380 ABCA6Q8N139 1617 aa20.2■□□□□ 0.82
PDLIM7-212ENST00000504380 MAGI2Q86UL8 1455 aa20.19■□□□□ 0.82
PDLIM7-212ENST00000504380 ARHGEF40Q8TER5 1519 aa20.18■□□□□ 0.82
PDLIM7-212ENST00000504380 DIP2CQ9Y2E4 1556 aa20.18■□□□□ 0.82
PDLIM7-212ENST00000504380 RTEL1-TNFRSF6BF6WH68 1400 aa20.17■□□□□ 0.82
PDLIM7-212ENST00000504380 MAST1Q9Y2H9 1570 aa20.17■□□□□ 0.82
PDLIM7-212ENST00000504380 RRP7BPQ9NSQ0 103 aa20.16■□□□□ 0.82
PDLIM7-212ENST00000504380 ATP10AO60312 1499 aa20.15■□□□□ 0.82
PDLIM7-212ENST00000504380 SHANK2Q9UPX8 1470 aa20.15■□□□□ 0.82
PDLIM7-212ENST00000504380 SIGLEC1Q9BZZ2 1709 aa20.13■□□□□ 0.81
PDLIM7-212ENST00000504380 ADGBQ8N7X0 1667 aa20.12■□□□□ 0.81
PDLIM7-212ENST00000504380 ARID4BQ4LE39 1312 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-212ENST00000504380 A2MP01023 1474 aa20.1■□□□□ 0.81
PDLIM7-212ENST00000504380 ANKRD30AQ9BXX3 1397 aa20.09■□□□□ 0.81
PDLIM7-212ENST00000504380 NCOA1Q15788 1441 aa20.09■□□□□ 0.81
PDLIM7-212ENST00000504380 KIF15Q9NS87 1388 aa20.08■□□□□ 0.81
PDLIM7-212ENST00000504380 PLXNC1O60486 1568 aa20.08■□□□□ 0.81
PDLIM7-212ENST00000504380 ADGRL2O95490 1459 aa20.08■□□□□ 0.81
PDLIM7-212ENST00000504380 MLECQ14165 292 aa20.07■□□□□ 0.8
PDLIM7-212ENST00000504380 DHX29Q7Z478 1369 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-212ENST00000504380 ROCK1Q13464 1354 aa20.04■□□□□ 0.8
PDLIM7-212ENST00000504380 REREQ9P2R6 1566 aa20.03■□□□□ 0.8
PDLIM7-212ENST00000504380 DUOX2Q9NRD8 1548 aa20.02■□□□□ 0.8
PDLIM7-212ENST00000504380 KIF3BO15066 747 aa20.02■□□□□ 0.8
PDLIM7-212ENST00000504380 TRIM26Q12899 539 aaPredicted RBP20■□□□□ 0.79
PDLIM7-212ENST00000504380 AGLP35573 1532 aa19.99■□□□□ 0.79
PDLIM7-212ENST00000504380 GGT6Q6P531 493 aa19.99■□□□□ 0.79
PDLIM7-212ENST00000504380 ANKRD50Q9ULJ7 1429 aa19.97■□□□□ 0.79
PDLIM7-212ENST00000504380 BCORL1Q5H9F3 1711 aa19.96■□□□□ 0.79
PDLIM7-212ENST00000504380 NAIPQ13075 1403 aa19.96■□□□□ 0.79
PDLIM7-212ENST00000504380 ERBINQ96RT1 1412 aa19.95■□□□□ 0.78
PDLIM7-212ENST00000504380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.94■□□□□ 0.78
PDLIM7-212ENST00000504380 GCC2Q8IWJ2 1684 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms