RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 EFCAB2Q5VUJ9 269 aa29.04■■■□□ 2.24
SH3TC1-208ENST00000504223 POGZQ7Z3K3 1410 aa29.03■■■□□ 2.24
SH3TC1-208ENST00000504223 ARHGAP5Q13017 1502 aa28.99■■■□□ 2.23
SH3TC1-208ENST00000504223 MAGI2Q86UL8 1455 aa28.98■■■□□ 2.23
SH3TC1-208ENST00000504223 CDC42BPBQ9Y5S2 1711 aa28.98■■■□□ 2.23
SH3TC1-208ENST00000504223 YEATS2Q9ULM3 1422 aa28.96■■■□□ 2.23
SH3TC1-208ENST00000504223 ZFYVE16Q7Z3T8 1539 aa28.96■■■□□ 2.23
SH3TC1-208ENST00000504223 PREX2Q70Z35 1606 aa28.95■■■□□ 2.23
SH3TC1-208ENST00000504223 ADAMTSL3P82987 1691 aa28.95■■■□□ 2.22
SH3TC1-208ENST00000504223 CDC42BPAQ5VT25 1732 aa28.92■■■□□ 2.22
SH3TC1-208ENST00000504223 BCORL1Q5H9F3 1711 aa28.91■■■□□ 2.22
SH3TC1-208ENST00000504223 ZNF518AQ6AHZ1 1483 aa28.9■■■□□ 2.22
SH3TC1-208ENST00000504223 ARID4BQ4LE39 1312 aaPredicted RBP28.88■■■□□ 2.21
SH3TC1-208ENST00000504223 KDM5CP41229 1560 aa28.88■■■□□ 2.21
SH3TC1-208ENST00000504223 SIGLEC1Q9BZZ2 1709 aa28.87■■■□□ 2.21
SH3TC1-208ENST00000504223 ABCC1P33527 1531 aa28.85■■■□□ 2.21
SH3TC1-208ENST00000504223 ARHGEF12Q9NZN5 1544 aa28.84■■■□□ 2.21
SH3TC1-208ENST00000504223 AFAP1Q8N556 730 aa28.84■■■□□ 2.21
SH3TC1-208ENST00000504223 PTPRMP28827 1452 aa28.84■■■□□ 2.21
SH3TC1-208ENST00000504223 GPATCH8Q9UKJ3 1502 aaKnown RBP28.84■■■□□ 2.21
SH3TC1-208ENST00000504223 MADDQ8WXG6 1647 aa28.83■■■□□ 2.21
SH3TC1-208ENST00000504223 ATP10AO60312 1499 aa28.81■■■□□ 2.2
SH3TC1-208ENST00000504223 VPS8Q8N3P4 1428 aa28.8■■■□□ 2.2
SH3TC1-208ENST00000504223 MTUS2Q5JR59 1369 aa28.8■■■□□ 2.2
SH3TC1-208ENST00000504223 TRAPPC8Q9Y2L5 1435 aa28.79■■■□□ 2.2
SH3TC1-208ENST00000504223 HECW2Q9P2P5 1572 aa28.79■■■□□ 2.2
SH3TC1-208ENST00000504223 EHBP1L1Q8N3D4 1523 aa28.79■■■□□ 2.2
SH3TC1-208ENST00000504223 ITSN2Q9NZM3 1697 aa28.78■■■□□ 2.2
SH3TC1-208ENST00000504223 C9orf84Q5VXU9 1444 aa28.77■■■□□ 2.2
SH3TC1-208ENST00000504223 MLH3Q9UHC1 1453 aa28.77■■■□□ 2.2
SH3TC1-208ENST00000504223 SAMD9LQ8IVG5 1584 aa28.75■■■□□ 2.19
SH3TC1-208ENST00000504223 TIAM1Q13009 1591 aa28.74■■■□□ 2.19
SH3TC1-208ENST00000504223 DIP2CQ9Y2E4 1556 aa28.73■■■□□ 2.19
SH3TC1-208ENST00000504223 CCNB3Q8WWL7 1395 aa28.73■■■□□ 2.19
SH3TC1-208ENST00000504223 RIMS1Q86UR5 1692 aaKnown RBP28.7■■■□□ 2.18
SH3TC1-208ENST00000504223 ABCA6Q8N139 1617 aa28.69■■■□□ 2.18
SH3TC1-208ENST00000504223 ZNF777Q9ULD5 760 aaPredicted RBP28.69■■■□□ 2.18
SH3TC1-208ENST00000504223 REREQ9P2R6 1566 aa28.69■■■□□ 2.18
SH3TC1-208ENST00000504223 SYCP2Q9BX26 1530 aa28.69■■■□□ 2.18
SH3TC1-208ENST00000504223 CFDP1Q9UEE9 299 aaPredicted RBP28.68■■■□□ 2.18
SH3TC1-208ENST00000504223 KIAA1107Q9UPP5 1409 aa28.67■■■□□ 2.18
SH3TC1-208ENST00000504223 MLECQ14165 292 aa28.66■■■□□ 2.18
SH3TC1-208ENST00000504223 PLEKHH2Q8IVE3 1493 aa28.65■■■□□ 2.18
SH3TC1-208ENST00000504223 KIDINS220Q9ULH0 1771 aa28.64■■■□□ 2.18
SH3TC1-208ENST00000504223 MYT1LQ9UL68 1186 aa28.63■■■□□ 2.17
SH3TC1-208ENST00000504223 NCOA2Q15596 1464 aa28.63■■■□□ 2.17
SH3TC1-208ENST00000504223 SUPT6HQ7KZ85 1726 aaKnown RBP28.63■■■□□ 2.17
SH3TC1-208ENST00000504223 HNRNPMP52272 730 aaKnown RBP eCLIP28.62■■■□□ 2.17
SH3TC1-208ENST00000504223 LRRC9Q6ZRR7 1453 aa28.6■■■□□ 2.17
SH3TC1-208ENST00000504223 FER1L4A9Z1Z3 1794 aa28.6■■■□□ 2.17
SH3TC1-208ENST00000504223 AGLP35573 1532 aa28.59■■■□□ 2.17
SH3TC1-208ENST00000504223 ZNF644Q9H582 1327 aaPredicted RBP28.58■■■□□ 2.17
SH3TC1-208ENST00000504223 MAP3K1Q13233 1512 aa28.58■■■□□ 2.17
SH3TC1-208ENST00000504223 KANK4Q5T7N3 995 aaPredicted RBP28.56■■■□□ 2.16
SH3TC1-208ENST00000504223 SPAG9O60271 1321 aaKnown RBP28.55■■■□□ 2.16
SH3TC1-208ENST00000504223 INO80Q9ULG1 1556 aaPredicted RBP28.54■■■□□ 2.16
SH3TC1-208ENST00000504223 LMTK3Q96Q04 1460 aa28.53■■■□□ 2.16
SH3TC1-208ENST00000504223 MBD5Q9P267 1494 aa28.53■■■□□ 2.16
SH3TC1-208ENST00000504223 ATP7AQ04656 1500 aa28.53■■■□□ 2.16
SH3TC1-208ENST00000504223 PLPPR3Q6T4P5 718 aa28.47■■■□□ 2.15
SH3TC1-208ENST00000504223 PLXNC1O60486 1568 aa28.45■■■□□ 2.15
SH3TC1-208ENST00000504223 CAMSAP2Q08AD1 1489 aa28.45■■■□□ 2.14
SH3TC1-208ENST00000504223 A2MP01023 1474 aa28.41■■■□□ 2.14
SH3TC1-208ENST00000504223 CEBPAP49715 358 aaPredicted RBP28.41■■■□□ 2.14
SH3TC1-208ENST00000504223 RTEL1-TNFRSF6BF6WH68 1400 aa28.4■■■□□ 2.14
SH3TC1-208ENST00000504223 CCDC141Q6ZP82 1450 aa28.39■■■□□ 2.13
SH3TC1-208ENST00000504223 ADGBQ8N7X0 1667 aa28.35■■■□□ 2.13
SH3TC1-208ENST00000504223 MYOM3Q5VTT5 1437 aa28.35■■■□□ 2.13
SH3TC1-208ENST00000504223 CNTLNQ9NXG0 1405 aa28.35■■■□□ 2.13
SH3TC1-208ENST00000504223 ARHGEF5Q12774 1597 aa28.34■■■□□ 2.13
SH3TC1-208ENST00000504223 C3P01024 1663 aa28.34■■■□□ 2.13
SH3TC1-208ENST00000504223 RSPH4AQ5TD94 716 aa28.33■■■□□ 2.13
SH3TC1-208ENST00000504223 PREX1Q8TCU6 1659 aa28.32■■■□□ 2.12
SH3TC1-208ENST00000504223 HSPA2P54652 639 aa28.32■■■□□ 2.12
SH3TC1-208ENST00000504223 ESF1Q9H501 851 aaKnown RBP28.31■■■□□ 2.12
SH3TC1-208ENST00000504223 MIA2Q96PC5 1412 aa28.29■■■□□ 2.12
SH3TC1-208ENST00000504223 APLP2Q06481 763 aa28.28■■■□□ 2.12
SH3TC1-208ENST00000504223 DHX29Q7Z478 1369 aaKnown RBP28.27■■■□□ 2.12
SH3TC1-208ENST00000504223 MROH2AA6NES4 1674 aa28.27■■■□□ 2.12
SH3TC1-208ENST00000504223 UHRF1BP1Q6BDS2 1440 aa28.24■■■□□ 2.11
SH3TC1-208ENST00000504223 ZMYM3Q14202 1370 aa28.22■■■□□ 2.11
SH3TC1-208ENST00000504223 GGT6Q6P531 493 aa28.21■■■□□ 2.11
SH3TC1-208ENST00000504223 MAST1Q9Y2H9 1570 aa28.2■■■□□ 2.11
SH3TC1-208ENST00000504223 CLTCQ00610 1675 aaKnown RBP28.2■■■□□ 2.11
SH3TC1-208ENST00000504223 TSPY4P0CV99 314 aa28.2■■■□□ 2.1
SH3TC1-208ENST00000504223 TSPY10P0CW01 314 aa28.2■■■□□ 2.1
SH3TC1-208ENST00000504223 NPATQ14207 1427 aa28.19■■■□□ 2.1
SH3TC1-208ENST00000504223 PTPN23Q9H3S7 1636 aa28.19■■■□□ 2.1
SH3TC1-208ENST00000504223 PPP6R1Q9UPN7 881 aa28.18■■■□□ 2.1
SH3TC1-208ENST00000504223 SETD1BQ9UPS6 1966 aaKnown RBP28.17■■■□□ 2.1
SH3TC1-208ENST00000504223 FGD6Q6ZV73 1430 aa28.16■■■□□ 2.1
SH3TC1-208ENST00000504223 TCOF1Q13428 1488 aaKnown RBP28.13■■■□□ 2.09
SH3TC1-208ENST00000504223 KIF3BO15066 747 aa28.12■■■□□ 2.09
SH3TC1-208ENST00000504223 ILDR1Q86SU0 546 aaPredicted RBP28.12■■■□□ 2.09
SH3TC1-208ENST00000504223 CROCC2H7BZ55 1655 aa28.12■■■□□ 2.09
SH3TC1-208ENST00000504223 PTPRKQ15262 1439 aa28.11■■■□□ 2.09
SH3TC1-208ENST00000504223 ABCC5O15440 1437 aa28.1■■■□□ 2.09
SH3TC1-208ENST00000504223 FAM135AQ9P2D6 1515 aa28.09■■■□□ 2.09
SH3TC1-208ENST00000504223 KDM5DQ9BY66 1539 aa28.08■■■□□ 2.08
SH3TC1-208ENST00000504223 DNMT1P26358 1616 aaKnown RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms