RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 NPM2Q86SE8 214 aaKnown RBP5.12□□□□□ -1.59
PCDH11X-208ENST00000504220 ZNF830Q96NB3 372 aaPredicted RBP5.12□□□□□ -1.59
PCDH11X-208ENST00000504220 KIF27Q86VH2 1401 aa5.12□□□□□ -1.59
PCDH11X-208ENST00000504220 SLC52A1Q9NWF4 448 aa5.12□□□□□ -1.59
PCDH11X-208ENST00000504220 IPO4Q8TEX9 1081 aaKnown RBP5.11□□□□□ -1.59
PCDH11X-208ENST00000504220 IGF1RP08069 1367 aa5.11□□□□□ -1.59
PCDH11X-208ENST00000504220 TMEM51Q9NW97 253 aa5.11□□□□□ -1.59
PCDH11X-208ENST00000504220 KIAA0586Q9BVV6 1533 aa5.1□□□□□ -1.59
PCDH11X-208ENST00000504220 UGGT2Q9NYU1 1516 aa5.1□□□□□ -1.59
PCDH11X-208ENST00000504220 KIF13AQ9H1H9 1805 aa5.1□□□□□ -1.59
PCDH11X-208ENST00000504220 IGSF3O75054 1194 aa5.1□□□□□ -1.59
PCDH11X-208ENST00000504220 IQGAP2Q13576 1575 aa5.1□□□□□ -1.59
PCDH11X-208ENST00000504220 MYT1LQ9UL68 1186 aa5.1□□□□□ -1.59
PCDH11X-208ENST00000504220 ADCY10Q96PN6 1610 aa5.09□□□□□ -1.59
PCDH11X-208ENST00000504220 RTL5Q5HYW3 569 aaPredicted RBP5.09□□□□□ -1.59
PCDH11X-208ENST00000504220 TEX2Q8IWB9 1127 aa5.09□□□□□ -1.59
PCDH11X-208ENST00000504220 MAPKBP1O60336 1514 aa5.08□□□□□ -1.6
PCDH11X-208ENST00000504220 PRXQ9BXM0 1461 aa5.08□□□□□ -1.6
PCDH11X-208ENST00000504220 KIF21BO75037 1637 aa5.08□□□□□ -1.6
PCDH11X-208ENST00000504220 HAP1P54257 671 aaPredicted RBP5.08□□□□□ -1.6
PCDH11X-208ENST00000504220 SAMD9Q5K651 1589 aa5.08□□□□□ -1.6
PCDH11X-208ENST00000504220 KIAA0556O60303 1618 aa5.08□□□□□ -1.6
PCDH11X-208ENST00000504220 BRPF3Q9ULD4 1205 aa5.07□□□□□ -1.6
PCDH11X-208ENST00000504220 UHRF1BP1LA0JNW5 1464 aa5.07□□□□□ -1.6
PCDH11X-208ENST00000504220 DISP1Q96F81 1524 aa5.06□□□□□ -1.6
PCDH11X-208ENST00000504220 RAPGEF2Q9Y4G8 1499 aa5.06□□□□□ -1.6
PCDH11X-208ENST00000504220 P3H3Q8IVL6 736 aa5.06□□□□□ -1.6
PCDH11X-208ENST00000504220 SLC4A1APQ9BWU0 796 aaKnown RBP5.06□□□□□ -1.6
PCDH11X-208ENST00000504220 CENPJQ9HC77 1338 aaPredicted RBP5.05□□□□□ -1.6
PCDH11X-208ENST00000504220 EEA1Q15075 1411 aa5.05□□□□□ -1.6
PCDH11X-208ENST00000504220 TMED8Q6PL24 325 aaPredicted RBP5.05□□□□□ -1.6
PCDH11X-208ENST00000504220 DCAF11Q8TEB1 546 aa5.05□□□□□ -1.6
PCDH11X-208ENST00000504220 CHMP7Q8WUX9 453 aaPredicted RBP5.05□□□□□ -1.6
PCDH11X-208ENST00000504220 ARID3CA6NKF2 412 aa5.05□□□□□ -1.6
PCDH11X-208ENST00000504220 RGS3P49796 1198 aa5.05□□□□□ -1.6
PCDH11X-208ENST00000504220 KCNA4P22459 653 aa5.05□□□□□ -1.6
PCDH11X-208ENST00000504220 MMP14P50281 582 aa5.05□□□□□ -1.6
PCDH11X-208ENST00000504220 BBXQ8WY36 941 aaPredicted RBP5.05□□□□□ -1.6
PCDH11X-208ENST00000504220 PPRC1Q5VV67 1664 aaKnown RBP5.04□□□□□ -1.6
PCDH11X-208ENST00000504220 GLI2P10070 1586 aa5.04□□□□□ -1.6
PCDH11X-208ENST00000504220 DIP2BQ9P265 1576 aa5.04□□□□□ -1.6
PCDH11X-208ENST00000504220 CARMIL1Q5VZK9 1371 aa5.04□□□□□ -1.6
PCDH11X-208ENST00000504220 ZNF316A6NFI3 1004 aaPredicted RBP5.04□□□□□ -1.6
PCDH11X-208ENST00000504220 ABCA8O94911 1581 aa5.04□□□□□ -1.6
PCDH11X-208ENST00000504220 PRG4Q92954 1404 aaPredicted RBP5.03□□□□□ -1.6
PCDH11X-208ENST00000504220 PSEN1P49768 467 aa5.03□□□□□ -1.6
PCDH11X-208ENST00000504220 BCCIPQ9P287 314 aaKnown RBP eCLIP5.03□□□□□ -1.6
PCDH11X-208ENST00000504220 ZCCHC11Q5TAX3 1644 aaKnown RBP5.03□□□□□ -1.6
PCDH11X-208ENST00000504220 MAP3K4Q9Y6R4 1608 aa5.03□□□□□ -1.6
PCDH11X-208ENST00000504220 ABCC2Q92887 1545 aa5.02□□□□□ -1.61
PCDH11X-208ENST00000504220 FAM50AQ14320 339 aaKnown RBP5.02□□□□□ -1.61
PCDH11X-208ENST00000504220 ZNF326Q5BKZ1 582 aaKnown RBP5.02□□□□□ -1.61
PCDH11X-208ENST00000504220 RGS22Q8NE09 1264 aa5.02□□□□□ -1.61
PCDH11X-208ENST00000504220 CALD1Q05682 793 aaKnown RBP5.02□□□□□ -1.61
PCDH11X-208ENST00000504220 RRAGDQ9NQL2 400 aaPredicted RBP5.02□□□□□ -1.61
PCDH11X-208ENST00000504220 ILDR1Q86SU0 546 aaPredicted RBP5.01□□□□□ -1.61
PCDH11X-208ENST00000504220 KDM5BQ9UGL1 1544 aa5.01□□□□□ -1.61
PCDH11X-208ENST00000504220 C14orf37Q86TY3 774 aa5.01□□□□□ -1.61
PCDH11X-208ENST00000504220 NAP1L5Q96NT1 182 aaPredicted RBP5.01□□□□□ -1.61
PCDH11X-208ENST00000504220 FAM43BQ6ZT52 329 aaPredicted RBP5□□□□□ -1.61
PCDH11X-208ENST00000504220 FTSJ3Q8IY81 847 aaKnown RBP5□□□□□ -1.61
PCDH11X-208ENST00000504220 EFCAB5A4FU69 1503 aa5□□□□□ -1.61
PCDH11X-208ENST00000504220 SOX12O15370 315 aa5□□□□□ -1.61
PCDH11X-208ENST00000504220 AMER1Q5JTC6 1135 aaPredicted RBP5□□□□□ -1.61
PCDH11X-208ENST00000504220 GOLGA3Q08378 1498 aa5□□□□□ -1.61
PCDH11X-208ENST00000504220 CNPY4Q8N129 248 aa5□□□□□ -1.61
PCDH11X-208ENST00000504220 ABCC10Q5T3U5 1492 aa4.99□□□□□ -1.61
PCDH11X-208ENST00000504220 TRIM52Q96A61 297 aa4.99□□□□□ -1.61
PCDH11X-208ENST00000504220 CDK11AQ9UQ88 783 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-208ENST00000504220 CFAP43Q8NDM7 1665 aa4.99□□□□□ -1.61
PCDH11X-208ENST00000504220 TNIKQ9UKE5 1360 aa4.99□□□□□ -1.61
PCDH11X-208ENST00000504220 RRP9O43818 475 aaKnown RBP4.99□□□□□ -1.61
PCDH11X-208ENST00000504220 TRHP20396 242 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-208ENST00000504220 FKBP8Q14318 412 aa4.99□□□□□ -1.61
PCDH11X-208ENST00000504220 GRIPAP1Q4V328 841 aa4.99□□□□□ -1.61
PCDH11X-208ENST00000504220 KCNH8Q96L42 1107 aa4.99□□□□□ -1.61
PCDH11X-208ENST00000504220 JPH4Q96JJ6 628 aa4.98□□□□□ -1.61
PCDH11X-208ENST00000504220 FBXO3Q9UK99 471 aa4.98□□□□□ -1.61
PCDH11X-208ENST00000504220 CARMIL2Q6F5E8 1435 aa4.98□□□□□ -1.61
PCDH11X-208ENST00000504220 RAPGEF6Q8TEU7 1601 aa4.98□□□□□ -1.61
PCDH11X-208ENST00000504220 LRRIQ1Q96JM4 1722 aa4.98□□□□□ -1.61
PCDH11X-208ENST00000504220 SENP3-EIF4A1A0A087X0R7 540 aa4.97□□□□□ -1.61
PCDH11X-208ENST00000504220 BORCS6Q96GS4 357 aa4.97□□□□□ -1.61
PCDH11X-208ENST00000504220 NBR1Q14596 966 aa4.97□□□□□ -1.61
PCDH11X-208ENST00000504220 ANP32CO43423 234 aa4.96□□□□□ -1.61
PCDH11X-208ENST00000504220 FAM43AQ8N2R8 423 aa4.96□□□□□ -1.61
PCDH11X-208ENST00000504220 ABCA9Q8IUA7 1624 aa4.96□□□□□ -1.61
PCDH11X-208ENST00000504220 UACAQ9BZF9 1416 aa4.96□□□□□ -1.61
PCDH11X-208ENST00000504220 VGFO15240 615 aaPredicted RBP4.96□□□□□ -1.62
PCDH11X-208ENST00000504220 PLB1Q6P1J6 1458 aa4.95□□□□□ -1.62
PCDH11X-208ENST00000504220 TMEM132AQ24JP5 1023 aa4.95□□□□□ -1.62
PCDH11X-208ENST00000504220 CYB5RLQ6IPT4 315 aa4.95□□□□□ -1.62
PCDH11X-208ENST00000504220 PHF23Q9BUL5 403 aaPredicted RBP4.94□□□□□ -1.62
PCDH11X-208ENST00000504220 HIRIP3Q9BW71 556 aaPredicted RBP4.94□□□□□ -1.62
PCDH11X-208ENST00000504220 EPRSP07814 1512 aaKnown RBP4.94□□□□□ -1.62
PCDH11X-208ENST00000504220 PRDM10Q9NQV6 1147 aa4.94□□□□□ -1.62
PCDH11X-208ENST00000504220 PTPRGP23470 1445 aa4.94□□□□□ -1.62
PCDH11X-208ENST00000504220 PLCD3Q8N3E9 789 aa4.94□□□□□ -1.62
PCDH11X-208ENST00000504220 DDX10Q13206 875 aaKnown RBP4.94□□□□□ -1.62
PCDH11X-208ENST00000504220 WDR7Q9Y4E6 1490 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms