RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 GPHNQ9NQX3 736 aaPredicted RBP14.56□□□□□ -0.08
UBE2D3-217ENST00000504211 LARP6Q9BRS8 491 aaKnown RBP14.53□□□□□ -0.08
UBE2D3-217ENST00000504211 WDR70Q9NW82 654 aa14.53□□□□□ -0.08
UBE2D3-217ENST00000504211 KIF3CO14782 793 aa14.52□□□□□ -0.09
UBE2D3-217ENST00000504211 C3orf67Q6ZVT6 689 aa14.51□□□□□ -0.09
UBE2D3-217ENST00000504211 DDX27Q96GQ7 796 aaKnown RBP14.51□□□□□ -0.09
UBE2D3-217ENST00000504211 POTEB2H3BUK9 544 aa14.5□□□□□ -0.09
UBE2D3-217ENST00000504211 TMEM92Q6UXU6 159 aa14.5□□□□□ -0.09
UBE2D3-217ENST00000504211 TMC2Q8TDI7 906 aa14.5□□□□□ -0.09
UBE2D3-217ENST00000504211 POTEJP0CG39 1038 aa14.48□□□□□ -0.09
UBE2D3-217ENST00000504211 C2orf72A6NCS6 295 aa14.47□□□□□ -0.09
UBE2D3-217ENST00000504211 P3H3Q8IVL6 736 aa14.46□□□□□ -0.09
UBE2D3-217ENST00000504211 FOXK1P85037 733 aa14.45□□□□□ -0.1
UBE2D3-217ENST00000504211 PPP1R15BQ5SWA1 713 aa14.45□□□□□ -0.1
UBE2D3-217ENST00000504211 DSG2Q14126 1118 aa14.44□□□□□ -0.1
UBE2D3-217ENST00000504211 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.44□□□□□ -0.1
UBE2D3-217ENST00000504211 CAMK2BQ13554 666 aa14.42□□□□□ -0.1
UBE2D3-217ENST00000504211 E2F4Q16254 413 aa14.42□□□□□ -0.1
UBE2D3-217ENST00000504211 KCNV2Q8TDN2 545 aa14.42□□□□□ -0.1
UBE2D3-217ENST00000504211 MAMSTRQ6ZN01 415 aa14.39□□□□□ -0.11
UBE2D3-217ENST00000504211 PLPP6Q8IY26 295 aa14.37□□□□□ -0.11
UBE2D3-217ENST00000504211 BCANQ96GW7 911 aa14.35□□□□□ -0.11
UBE2D3-217ENST00000504211 SCUBE2Q9NQ36 999 aa14.35□□□□□ -0.11
UBE2D3-217ENST00000504211 ARIH1Q9Y4X5 557 aaPredicted RBP14.34□□□□□ -0.11
UBE2D3-217ENST00000504211 ARHGEF1Q92888 912 aaKnown RBP14.33□□□□□ -0.12
UBE2D3-217ENST00000504211 EMILIN3Q9NT22 766 aa14.29□□□□□ -0.12
UBE2D3-217ENST00000504211 NBR1Q14596 966 aa14.26□□□□□ -0.13
UBE2D3-217ENST00000504211 LHX8Q68G74 356 aa14.26□□□□□ -0.13
UBE2D3-217ENST00000504211 SLAIN1Q8ND83 568 aa14.26□□□□□ -0.13
UBE2D3-217ENST00000504211 SLC34A2O95436 690 aa14.23□□□□□ -0.13
UBE2D3-217ENST00000504211 OTUD5Q96G74 571 aa14.23□□□□□ -0.13
UBE2D3-217ENST00000504211 OXER1Q8TDS5 423 aa14.22□□□□□ -0.13
UBE2D3-217ENST00000504211 PTCD2Q8WV60 388 aaKnown RBP14.19□□□□□ -0.14
UBE2D3-217ENST00000504211 DPYSL4O14531 572 aa14.18□□□□□ -0.14
UBE2D3-217ENST00000504211 PDIA6Q15084 440 aa14.16□□□□□ -0.14
UBE2D3-217ENST00000504211 UPF1Q92900 1129 aaKnown RBP eCLIP14.15□□□□□ -0.14
UBE2D3-217ENST00000504211 HOXB3P14651 431 aaPredicted RBP14.14□□□□□ -0.15
UBE2D3-217ENST00000504211 SPDYE16A6NNV3 312 aaPredicted RBP14.13□□□□□ -0.15
UBE2D3-217ENST00000504211 MAP3K9P80192 1104 aa14.11□□□□□ -0.15
UBE2D3-217ENST00000504211 DOK7Q18PE1 504 aa14.11□□□□□ -0.15
UBE2D3-217ENST00000504211 TESPA1A2RU30 521 aaPredicted RBP14.09□□□□□ -0.15
UBE2D3-217ENST00000504211 SEMA3EO15041 775 aa14.09□□□□□ -0.15
UBE2D3-217ENST00000504211 TBC1D12O60347 775 aa14.09□□□□□ -0.15
UBE2D3-217ENST00000504211 PCDHGA4Q9Y5G9 962 aa14.08□□□□□ -0.16
UBE2D3-217ENST00000504211 ZSWIM6Q9HCJ5 1215 aa14.07□□□□□ -0.16
UBE2D3-217ENST00000504211 SNPHO15079 494 aa14.06□□□□□ -0.16
UBE2D3-217ENST00000504211 RIMBP2O15034 1052 aa14.05□□□□□ -0.16
UBE2D3-217ENST00000504211 EVI5O60447 810 aa14.03□□□□□ -0.16
UBE2D3-217ENST00000504211 KDM4FA0A1W2PPD8 638 aa14.02□□□□□ -0.17
UBE2D3-217ENST00000504211 ZNF316A6NFI3 1004 aaPredicted RBP14.01□□□□□ -0.17
UBE2D3-217ENST00000504211 PTGER2P43116 358 aa14.01□□□□□ -0.17
UBE2D3-217ENST00000504211 ANO8Q9HCE9 1232 aaPredicted RBP14.01□□□□□ -0.17
UBE2D3-217ENST00000504211 GPR153Q6NV75 609 aa14□□□□□ -0.17
UBE2D3-217ENST00000504211 ZNF710Q8N1W2 664 aa13.99□□□□□ -0.17
UBE2D3-217ENST00000504211 MLLT3P42568 568 aaPredicted RBP13.98□□□□□ -0.17
UBE2D3-217ENST00000504211 TULP1O00294 542 aaPredicted RBP13.96□□□□□ -0.17
UBE2D3-217ENST00000504211 ARSIQ5FYB1 569 aa13.96□□□□□ -0.17
UBE2D3-217ENST00000504211 SMYD5Q6GMV2 418 aa13.96□□□□□ -0.17
UBE2D3-217ENST00000504211 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.95□□□□□ -0.18
UBE2D3-217ENST00000504211 HOXB1P14653 301 aaPredicted RBP13.93□□□□□ -0.18
UBE2D3-217ENST00000504211 KHSRPQ92945 711 aaKnown RBP eCLIP13.93□□□□□ -0.183e-7■■■■□ 19.3
UBE2D3-217ENST00000504211 NUDT7P0C024 238 aa13.92□□□□□ -0.18
UBE2D3-217ENST00000504211 LMOD2Q6P5Q4 547 aa13.92□□□□□ -0.18
UBE2D3-217ENST00000504211 DDX12PQ92771 950 aa13.89□□□□□ -0.19
UBE2D3-217ENST00000504211 GRXCR2A6NFK2 248 aa13.87□□□□□ -0.19
UBE2D3-217ENST00000504211 OSBPP22059 807 aa13.87□□□□□ -0.19
UBE2D3-217ENST00000504211 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
UBE2D3-217ENST00000504211 PHF14O94880 888 aa13.86□□□□□ -0.19
UBE2D3-217ENST00000504211 FOSBP53539 338 aa13.84□□□□□ -0.19
UBE2D3-217ENST00000504211 EPAS1Q99814 870 aa13.84□□□□□ -0.19
UBE2D3-217ENST00000504211 PCDHGA10Q9Y5H3 936 aa13.83□□□□□ -0.2
UBE2D3-217ENST00000504211 ST18O60284 1047 aa13.82□□□□□ -0.2
UBE2D3-217ENST00000504211 RBM26Q5T8P6 1007 aaKnown RBP13.82□□□□□ -0.2
UBE2D3-217ENST00000504211 LHX6Q9UPM6 363 aa13.82□□□□□ -0.2
UBE2D3-217ENST00000504211 PSDA5PKW4 1024 aaPredicted RBP13.79□□□□□ -0.2
UBE2D3-217ENST00000504211 PRIM1P49642 420 aaKnown RBP13.79□□□□□ -0.2
UBE2D3-217ENST00000504211 TYW1BQ6NUM6 668 aa13.79□□□□□ -0.2
UBE2D3-217ENST00000504211 FBXW7Q969H0 707 aa13.79□□□□□ -0.2
UBE2D3-217ENST00000504211 EN1Q05925 392 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-217ENST00000504211 TPRNQ4KMQ1 711 aa13.77□□□□□ -0.21
UBE2D3-217ENST00000504211 ZNF454Q8N9F8 522 aa13.77□□□□□ -0.21
UBE2D3-217ENST00000504211 LCE2DQ5TA82 110 aaPredicted RBP13.74□□□□□ -0.21
UBE2D3-217ENST00000504211 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
UBE2D3-217ENST00000504211 ZDHHC16Q969W1 377 aa13.74□□□□□ -0.21
UBE2D3-217ENST00000504211 PPP4R3BQ5MIZ7 849 aa13.73□□□□□ -0.21
UBE2D3-217ENST00000504211 ZC3H15Q8WU90 426 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-217ENST00000504211 GPR37O15354 613 aa13.72□□□□□ -0.21
UBE2D3-217ENST00000504211 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-217ENST00000504211 MAP3K7O43318 606 aa13.7□□□□□ -0.22
UBE2D3-217ENST00000504211 PRKCSHP14314 528 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-217ENST00000504211 EMP3P54852 163 aa13.69□□□□□ -0.22
UBE2D3-217ENST00000504211 ADAM33Q9BZ11 813 aa13.69□□□□□ -0.22
UBE2D3-217ENST00000504211 NUTM2FA1L443 756 aa13.68□□□□□ -0.22
UBE2D3-217ENST00000504211 MARVELD3Q96A59 401 aa13.68□□□□□ -0.22
UBE2D3-217ENST00000504211 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-217ENST00000504211 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
UBE2D3-217ENST00000504211 ERBB3P21860 1342 aa13.66□□□□□ -0.22
UBE2D3-217ENST00000504211 TSR1Q2NL82 804 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-217ENST00000504211 ZMYND10O75800 440 aa13.65□□□□□ -0.22
UBE2D3-217ENST00000504211 FCHSD2O94868 740 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms