RNA–Protein interactions for RNA: ENST00000504174.5

SSBP2-203, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-203ENST00000504174 RIMS1Q86UR5 1692 aaKnown RBP37.79■■■■□ 3.64
SSBP2-203ENST00000504174 KIF14Q15058 1648 aa37.77■■■■□ 3.64
SSBP2-203ENST00000504174 YEATS2Q9ULM3 1422 aa37.77■■■■□ 3.64
SSBP2-203ENST00000504174 EFCAB2Q5VUJ9 269 aa37.76■■■■□ 3.64
SSBP2-203ENST00000504174 CLIP1P30622 1438 aa37.73■■■■□ 3.63
SSBP2-203ENST00000504174 TROQ12816 1431 aaPredicted RBP37.72■■■■□ 3.63
SSBP2-203ENST00000504174 PCF11O94913 1555 aaKnown RBP37.7■■■■□ 3.63
SSBP2-203ENST00000504174 LRRIQ1Q96JM4 1722 aa37.67■■■■□ 3.62
SSBP2-203ENST00000504174 SIGLEC1Q9BZZ2 1709 aa37.67■■■■□ 3.62
SSBP2-203ENST00000504174 ARHGAP5Q13017 1502 aa37.65■■■■□ 3.62
SSBP2-203ENST00000504174 LMTK3Q96Q04 1460 aa37.63■■■■□ 3.61
SSBP2-203ENST00000504174 ATP10AO60312 1499 aa37.61■■■■□ 3.61
SSBP2-203ENST00000504174 MLECQ14165 292 aa37.61■■■■□ 3.61
SSBP2-203ENST00000504174 ZNF518AQ6AHZ1 1483 aa37.59■■■■□ 3.61
SSBP2-203ENST00000504174 PLPPR3Q6T4P5 718 aa37.59■■■■□ 3.61
SSBP2-203ENST00000504174 FER1L4A9Z1Z3 1794 aa37.59■■■■□ 3.61
SSBP2-203ENST00000504174 C9orf84Q5VXU9 1444 aa37.58■■■■□ 3.61
SSBP2-203ENST00000504174 CCDC18Q5T9S5 1454 aa37.58■■■■□ 3.61
SSBP2-203ENST00000504174 CASKIN1Q8WXD9 1431 aa37.56■■■■□ 3.6
SSBP2-203ENST00000504174 MYT1LQ9UL68 1186 aa37.51■■■■□ 3.6
SSBP2-203ENST00000504174 CDC42BPBQ9Y5S2 1711 aa37.5■■■■□ 3.59
SSBP2-203ENST00000504174 KDM5CP41229 1560 aa37.5■■■■□ 3.59
SSBP2-203ENST00000504174 AFAP1Q8N556 730 aa37.48■■■■□ 3.59
SSBP2-203ENST00000504174 ARHGEF12Q9NZN5 1544 aa37.47■■■■□ 3.59
SSBP2-203ENST00000504174 PREX2Q70Z35 1606 aa37.47■■■■□ 3.59
SSBP2-203ENST00000504174 FBXO41Q8TF61 875 aa37.43■■■■□ 3.58
SSBP2-203ENST00000504174 FYCO1Q9BQS8 1478 aa37.43■■■■□ 3.58
SSBP2-203ENST00000504174 HSPA2P54652 639 aa37.41■■■■□ 3.58
SSBP2-203ENST00000504174 DIP2CQ9Y2E4 1556 aa37.38■■■■□ 3.57
SSBP2-203ENST00000504174 ABCC1P33527 1531 aa37.37■■■■□ 3.57
SSBP2-203ENST00000504174 MLH3Q9UHC1 1453 aa37.36■■■■□ 3.57
SSBP2-203ENST00000504174 ITSN2Q9NZM3 1697 aa37.34■■■■□ 3.57
SSBP2-203ENST00000504174 REREQ9P2R6 1566 aa37.34■■■■□ 3.57
SSBP2-203ENST00000504174 CDC42BPAQ5VT25 1732 aa37.34■■■■□ 3.57
SSBP2-203ENST00000504174 ABCA6Q8N139 1617 aa37.32■■■■□ 3.56
SSBP2-203ENST00000504174 TRAPPC8Q9Y2L5 1435 aa37.3■■■■□ 3.56
SSBP2-203ENST00000504174 PREX1Q8TCU6 1659 aa37.3■■■■□ 3.56
SSBP2-203ENST00000504174 CEBPAP49715 358 aaPredicted RBP37.26■■■■□ 3.56
SSBP2-203ENST00000504174 ZNF777Q9ULD5 760 aaPredicted RBP37.22■■■■□ 3.55
SSBP2-203ENST00000504174 AGLP35573 1532 aa37.21■■■■□ 3.55
SSBP2-203ENST00000504174 ESF1Q9H501 851 aaKnown RBP37.21■■■■□ 3.55
SSBP2-203ENST00000504174 KIDINS220Q9ULH0 1771 aa37.19■■■■□ 3.54
SSBP2-203ENST00000504174 SAMD9LQ8IVG5 1584 aa37.17■■■■□ 3.54
SSBP2-203ENST00000504174 GPATCH8Q9UKJ3 1502 aaKnown RBP37.16■■■■□ 3.54
SSBP2-203ENST00000504174 UHRF1BP1Q6BDS2 1440 aa37.15■■■■□ 3.54
SSBP2-203ENST00000504174 SYCP2Q9BX26 1530 aa37.12■■■■□ 3.53
SSBP2-203ENST00000504174 C3P01024 1663 aa37.12■■■■□ 3.53
SSBP2-203ENST00000504174 SETD1BQ9UPS6 1966 aaKnown RBP37.11■■■■□ 3.53
SSBP2-203ENST00000504174 MTUS2Q5JR59 1369 aa37.09■■■■□ 3.53
SSBP2-203ENST00000504174 CCNB3Q8WWL7 1395 aa37.09■■■■□ 3.53
SSBP2-203ENST00000504174 PLEKHH2Q8IVE3 1493 aa37.08■■■■□ 3.53
SSBP2-203ENST00000504174 CFDP1Q9UEE9 299 aaPredicted RBP37.08■■■■□ 3.53
SSBP2-203ENST00000504174 SPAG9O60271 1321 aaKnown RBP37.08■■■■□ 3.53
SSBP2-203ENST00000504174 HNRNPMP52272 730 aaKnown RBP eCLIP37.06■■■■□ 3.521e-6■■■■□ 22.8
SSBP2-203ENST00000504174 CNTLNQ9NXG0 1405 aa37.06■■■■□ 3.52
SSBP2-203ENST00000504174 DMRT2Q9Y5R5 561 aa37.05■■■■□ 3.52
SSBP2-203ENST00000504174 KIAA1107Q9UPP5 1409 aa37.04■■■■□ 3.52
SSBP2-203ENST00000504174 CERKQ8TCT0 537 aa37.03■■■■□ 3.52
SSBP2-203ENST00000504174 ATP7AQ04656 1500 aa37■■■■□ 3.51
SSBP2-203ENST00000504174 STRCQ7RTU9 1775 aa36.99■■■■□ 3.51
SSBP2-203ENST00000504174 SUPT6HQ7KZ85 1726 aaKnown RBP36.97■■■■□ 3.51
SSBP2-203ENST00000504174 INO80Q9ULG1 1556 aaPredicted RBP36.95■■■■□ 3.51
SSBP2-203ENST00000504174 EHBP1L1Q8N3D4 1523 aa36.95■■■■□ 3.5
SSBP2-203ENST00000504174 MROH2AA6NES4 1674 aa36.94■■■■□ 3.5
SSBP2-203ENST00000504174 TIAM1Q13009 1591 aa36.91■■■■□ 3.5
SSBP2-203ENST00000504174 CEP162Q5TB80 1403 aa36.9■■■■□ 3.5
SSBP2-203ENST00000504174 A2MP01023 1474 aa36.89■■■■□ 3.5
SSBP2-203ENST00000504174 PLXNC1O60486 1568 aa36.87■■■■□ 3.49
SSBP2-203ENST00000504174 NPATQ14207 1427 aa36.85■■■■□ 3.49
SSBP2-203ENST00000504174 ADGBQ8N7X0 1667 aa36.84■■■■□ 3.49
SSBP2-203ENST00000504174 ZMYM3Q14202 1370 aa36.84■■■■□ 3.49
SSBP2-203ENST00000504174 PTPRTO14522 1441 aa36.83■■■■□ 3.49
SSBP2-203ENST00000504174 CLTCQ00610 1675 aaKnown RBP36.82■■■■□ 3.48
SSBP2-203ENST00000504174 ZNF644Q9H582 1327 aaPredicted RBP36.81■■■■□ 3.48
SSBP2-203ENST00000504174 GGT6Q6P531 493 aa36.78■■■■□ 3.48
SSBP2-203ENST00000504174 MBD5Q9P267 1494 aa36.76■■■■□ 3.48
SSBP2-203ENST00000504174 NCOA1Q15788 1441 aa36.75■■■■□ 3.47
SSBP2-203ENST00000504174 PPP6R1Q9UPN7 881 aa36.73■■■■□ 3.47
SSBP2-203ENST00000504174 RTEL1-TNFRSF6BF6WH68 1400 aa36.73■■■■□ 3.47
SSBP2-203ENST00000504174 CAMSAP1Q5T5Y3 1602 aa36.7■■■■□ 3.47
SSBP2-203ENST00000504174 NCOA2Q15596 1464 aa36.69■■■■□ 3.46
SSBP2-203ENST00000504174 MYO3AQ8NEV4 1616 aa36.66■■■■□ 3.46
SSBP2-203ENST00000504174 ZNF142P52746 1687 aaPredicted RBP36.64■■■■□ 3.46
SSBP2-203ENST00000504174 CCDC141Q6ZP82 1450 aa36.64■■■■□ 3.46
SSBP2-203ENST00000504174 PTPRKQ15262 1439 aa36.64■■■■□ 3.46
SSBP2-203ENST00000504174 DHX29Q7Z478 1369 aaKnown RBP36.64■■■■□ 3.46
SSBP2-203ENST00000504174 CAMSAP2Q08AD1 1489 aa36.63■■■■□ 3.45
SSBP2-203ENST00000504174 RSPH4AQ5TD94 716 aa36.63■■■■□ 3.45
SSBP2-203ENST00000504174 CEP170BQ9Y4F5 1589 aaPredicted RBP36.59■■■■□ 3.45
SSBP2-203ENST00000504174 LTBP4Q8N2S1 1624 aa36.56■■■■□ 3.44
SSBP2-203ENST00000504174 PLA2R1Q13018 1463 aa36.55■■■■□ 3.44
SSBP2-203ENST00000504174 NCKAP5LQ9HCH0 1330 aa36.55■■■■□ 3.44
SSBP2-203ENST00000504174 KIF3BO15066 747 aa36.54■■■■□ 3.44
SSBP2-203ENST00000504174 VPS8Q8N3P4 1428 aa36.53■■■■□ 3.44
SSBP2-203ENST00000504174 PKD2Q13563 968 aa36.53■■■■□ 3.44
SSBP2-203ENST00000504174 IQSEC2Q5JU85 1478 aa36.51■■■■□ 3.44
SSBP2-203ENST00000504174 ARHGEF5Q12774 1597 aa36.51■■■■□ 3.44
SSBP2-203ENST00000504174 TSPY4P0CV99 314 aa36.5■■■■□ 3.43
SSBP2-203ENST00000504174 TSPY10P0CW01 314 aa36.5■■■■□ 3.43
SSBP2-203ENST00000504174 FAM135AQ9P2D6 1515 aa36.49■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms